Acta Cryst. (2009). E65, o1523 [ doi:10.1107/S1600536809021254 ]
The title compound, C15H10O4·H2O, also known as alizarin 1-methyl ether monohydrate, was isolated from Morinda officinalis How. The anthraquinone ring system is almost planar, the dihedral angle between the two outer benzene rings being 3.07 (4)°. In the crystal structure, O-H
O hydrogen bonds link the organic molecules and the water molecules, forming a three-dimensional network.
The roots of Morinda officinalis How (1000 g) were shattered to powder (about 30 mesh) and extracted with 85% ethanol (4000 ml) for 2 h with stirring. The extraction procedure was repeated three times. The extracts were combined and evaporated to dryness under reduced pressure at 333 K, the residue was redissolved in water (800 ml). Then the enriched extracts were extracted with chloroform three times (800 ml for each time), the chlorofrom solution were combined and evaporated to dryness under reduced pressure at 333 K. 6.80 g of crude extracts were obtained. The crude extracts were separated with n-hexane-ethyl acetate-methanol-water (6 : 4 : 5 : 5, v/v) using high-speed counter-current chromatography (HSCCC) to obtain 1-Methoxy-2-hydroxyanthraquinone (yield 90.6 mg). Single crystals suitable for X-ray analysis were obtained by slow evaporation of a methanol solution.
H atoms not pertaining to water molecules were placed at calculated positions and treated as riding on the parent atoms with C—H = 0.93–0.97 and O—H = 0.82 Å, and with Uiso(H) = 1.2 or 1.5 Ueq(C, O). The water hydrogen atoms were found from the Fourier maps and refined with restrained O-H=0.86 (3)Å and free Uiso(H).
Data collection: APEX2 (Bruker, 2004); cell refinement: SAINT (Bruker, 2004); data reduction: SAINT (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).
| C15H10O4·H2O | Z = 2 |
| Mr = 272.25 | F(000) = 284.0 |
| Triclinic, P1 | Dx = 1.457 Mg m−3 |
| Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
| a = 7.9583 (19) Å | Cell parameters from 1018 reflections |
| b = 8.269 (2) Å | θ = 2.6–26.2° |
| c = 10.188 (2) Å | µ = 0.11 mm−1 |
| α = 102.462 (3)° | T = 298 K |
| β = 102.364 (3)° | Block, yellow |
| γ = 100.653 (3)° | 0.30 × 0.20 × 0.15 mm |
| V = 620.4 (2) Å3 |
| Bruker APEXII area-detector diffractometer | 2198 independent reflections |
| Radiation source: fine-focus sealed tube | 1488 reflections with I > 2σ(I) |
| graphite | Rint = 0.013 |
| φ and ω scans | θmax = 25.2°, θmin = 2.1° |
| Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −9→9 |
| Tmin = 0.973, Tmax = 0.986 | k = −9→9 |
| 3218 measured reflections | l = −12→9 |
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.046 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.147 | H atoms treated by a mixture of independent and constrained refinement |
| S = 1.04 | w = 1/[σ2(Fo2) + (0.0778P)2 + 0.0805P] where P = (Fo2 + 2Fc2)/3 |
| 2198 reflections | (Δ/σ)max < 0.001 |
| 191 parameters | Δρmax = 0.27 e Å−3 |
| 3 restraints | Δρmin = −0.17 e Å−3 |
| C15H10O4·H2O | γ = 100.653 (3)° |
| Mr = 272.25 | V = 620.4 (2) Å3 |
| Triclinic, P1 | Z = 2 |
| a = 7.9583 (19) Å | Mo Kα radiation |
| b = 8.269 (2) Å | µ = 0.11 mm−1 |
| c = 10.188 (2) Å | T = 298 K |
| α = 102.462 (3)° | 0.30 × 0.20 × 0.15 mm |
| β = 102.364 (3)° |
| Bruker APEXII area-detector diffractometer | 2198 independent reflections |
| Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1488 reflections with I > 2σ(I) |
| Tmin = 0.973, Tmax = 0.986 | Rint = 0.013 |
| 3218 measured reflections | θmax = 25.2° |
| R[F2 > 2σ(F2)] = 0.046 | H atoms treated by a mixture of independent and constrained refinement |
| wR(F2) = 0.147 | Δρmax = 0.27 e Å−3 |
| S = 1.04 | Δρmin = −0.17 e Å−3 |
| 2198 reflections | Absolute structure: ? |
| 191 parameters | Flack parameter: ? |
| 3 restraints | Rogers parameter: ? |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| x | y | z | Uiso*/Ueq | ||
| C1 | 0.6640 (3) | 0.3815 (2) | 0.3121 (2) | 0.0509 (5) | |
| C2 | 0.7049 (3) | 0.2214 (2) | 0.30375 (19) | 0.0476 (5) | |
| C3 | 0.7720 (3) | −0.0406 (2) | 0.1655 (2) | 0.0485 (5) | |
| C4 | 0.8497 (3) | −0.2806 (2) | 0.0176 (2) | 0.0555 (5) | |
| H4 | 0.8772 | −0.3219 | 0.0955 | 0.067* | |
| C5 | 0.8632 (3) | −0.3695 (3) | −0.1086 (3) | 0.0645 (6) | |
| H5 | 0.8980 | −0.4717 | −0.1158 | 0.077* | |
| C6 | 0.8257 (3) | −0.3093 (3) | −0.2248 (3) | 0.0668 (6) | |
| H6 | 0.8347 | −0.3707 | −0.3099 | 0.080* | |
| C7 | 0.7746 (3) | −0.1565 (3) | −0.2142 (2) | 0.0600 (6) | |
| H7 | 0.7505 | −0.1146 | −0.2921 | 0.072* | |
| C8 | 0.7044 (3) | 0.0971 (2) | −0.07708 (19) | 0.0500 (5) | |
| C9 | 0.6444 (3) | 0.3450 (2) | 0.0710 (2) | 0.0514 (5) | |
| H9 | 0.6210 | 0.3853 | −0.0078 | 0.062* | |
| C10 | 0.6335 (3) | 0.4407 (3) | 0.1954 (2) | 0.0542 (5) | |
| H10 | 0.6054 | 0.5458 | 0.2006 | 0.065* | |
| C11 | 0.7216 (2) | 0.1254 (2) | 0.17820 (19) | 0.0438 (5) | |
| C12 | 0.6896 (2) | 0.1890 (2) | 0.06001 (19) | 0.0444 (5) | |
| C13 | 0.7951 (2) | −0.1285 (2) | 0.0293 (2) | 0.0462 (5) | |
| C14 | 0.7593 (2) | −0.0664 (2) | −0.08792 (19) | 0.0472 (5) | |
| C15 | 0.8905 (4) | 0.2159 (3) | 0.5181 (2) | 0.0869 (8) | |
| H15A | 0.9726 | 0.1661 | 0.4763 | 0.130* | |
| H15B | 0.8843 | 0.1791 | 0.6005 | 0.130* | |
| H15C | 0.9298 | 0.3380 | 0.5425 | 0.130* | |
| O1 | 0.6741 (2) | 0.15409 (19) | −0.17812 (15) | 0.0741 (5) | |
| O2 | 0.7941 (3) | −0.10671 (19) | 0.26171 (16) | 0.0772 (5) | |
| O3 | 0.6543 (2) | 0.46790 (18) | 0.43714 (14) | 0.0679 (5) | |
| H3 | 0.6315 | 0.5594 | 0.4317 | 0.102* | |
| O4 | 0.7180 (2) | 0.16259 (18) | 0.42088 (14) | 0.0616 (4) | |
| O1W | 0.5800 (3) | 0.7728 (2) | 0.44181 (19) | 0.0829 (6) | |
| H1W | 0.597 (4) | 0.844 (4) | 0.393 (4) | 0.162 (15)* | |
| H2W | 0.472 (2) | 0.762 (4) | 0.450 (4) | 0.134 (14)* |
| U11 | U22 | U33 | U12 | U13 | U23 | |
| C1 | 0.0497 (12) | 0.0517 (11) | 0.0508 (11) | 0.0118 (9) | 0.0133 (9) | 0.0132 (9) |
| C2 | 0.0446 (11) | 0.0537 (11) | 0.0457 (11) | 0.0084 (9) | 0.0097 (8) | 0.0211 (9) |
| C3 | 0.0464 (11) | 0.0500 (11) | 0.0492 (11) | 0.0071 (9) | 0.0100 (9) | 0.0196 (9) |
| C4 | 0.0493 (12) | 0.0548 (12) | 0.0635 (13) | 0.0132 (9) | 0.0144 (10) | 0.0182 (10) |
| C5 | 0.0549 (14) | 0.0588 (13) | 0.0799 (16) | 0.0187 (10) | 0.0190 (11) | 0.0134 (11) |
| C6 | 0.0577 (14) | 0.0715 (15) | 0.0633 (14) | 0.0117 (12) | 0.0181 (11) | 0.0030 (11) |
| C7 | 0.0561 (13) | 0.0671 (14) | 0.0510 (12) | 0.0073 (11) | 0.0120 (10) | 0.0128 (10) |
| C8 | 0.0450 (11) | 0.0557 (11) | 0.0432 (11) | 0.0020 (9) | 0.0041 (8) | 0.0166 (9) |
| C9 | 0.0515 (12) | 0.0506 (11) | 0.0516 (11) | 0.0082 (9) | 0.0067 (9) | 0.0226 (9) |
| C10 | 0.0557 (13) | 0.0504 (11) | 0.0565 (12) | 0.0133 (9) | 0.0096 (10) | 0.0191 (10) |
| C11 | 0.0370 (10) | 0.0449 (10) | 0.0490 (11) | 0.0051 (8) | 0.0090 (8) | 0.0179 (8) |
| C12 | 0.0384 (10) | 0.0451 (10) | 0.0462 (11) | 0.0028 (8) | 0.0060 (8) | 0.0163 (8) |
| C13 | 0.0360 (10) | 0.0464 (11) | 0.0533 (11) | 0.0039 (8) | 0.0094 (8) | 0.0146 (9) |
| C14 | 0.0382 (10) | 0.0504 (11) | 0.0468 (11) | 0.0010 (8) | 0.0082 (8) | 0.0115 (8) |
| C15 | 0.100 (2) | 0.0976 (19) | 0.0591 (15) | 0.0295 (16) | −0.0015 (14) | 0.0303 (14) |
| O1 | 0.1049 (13) | 0.0732 (10) | 0.0481 (9) | 0.0260 (9) | 0.0141 (8) | 0.0263 (7) |
| O2 | 0.1226 (15) | 0.0696 (10) | 0.0615 (10) | 0.0433 (10) | 0.0352 (9) | 0.0355 (8) |
| O3 | 0.0926 (12) | 0.0649 (10) | 0.0561 (9) | 0.0349 (9) | 0.0257 (8) | 0.0172 (7) |
| O4 | 0.0760 (10) | 0.0684 (9) | 0.0503 (8) | 0.0229 (8) | 0.0207 (7) | 0.0277 (7) |
| O1W | 0.1221 (18) | 0.0768 (12) | 0.0776 (12) | 0.0454 (11) | 0.0478 (11) | 0.0384 (10) |
| C1—O3 | 1.345 (2) | C8—O1 | 1.218 (2) |
| C1—C10 | 1.373 (3) | C8—C12 | 1.479 (3) |
| C1—C2 | 1.410 (3) | C8—C14 | 1.486 (3) |
| C2—O4 | 1.374 (2) | C9—C10 | 1.371 (3) |
| C2—C11 | 1.399 (3) | C9—C12 | 1.390 (3) |
| C3—O2 | 1.218 (2) | C9—H9 | 0.9300 |
| C3—C13 | 1.487 (3) | C10—H10 | 0.9300 |
| C3—C11 | 1.487 (3) | C11—C12 | 1.408 (2) |
| C4—C5 | 1.373 (3) | C13—C14 | 1.395 (3) |
| C4—C13 | 1.394 (3) | C15—O4 | 1.437 (3) |
| C4—H4 | 0.9300 | C15—H15A | 0.9600 |
| C5—C6 | 1.377 (3) | C15—H15B | 0.9600 |
| C5—H5 | 0.9300 | C15—H15C | 0.9600 |
| C6—C7 | 1.387 (3) | O3—H3 | 0.8200 |
| C6—H6 | 0.9300 | O1W—H1W | 0.86 (3) |
| C7—C14 | 1.382 (3) | O1W—H2W | 0.87 (3) |
| C7—H7 | 0.9300 | ||
| O3—C1—C10 | 123.24 (18) | C12—C9—H9 | 119.2 |
| O3—C1—C2 | 116.77 (17) | C9—C10—C1 | 120.01 (18) |
| C10—C1—C2 | 119.98 (18) | C9—C10—H10 | 120.0 |
| O4—C2—C11 | 122.55 (17) | C1—C10—H10 | 120.0 |
| O4—C2—C1 | 117.08 (17) | C2—C11—C12 | 118.56 (17) |
| C11—C2—C1 | 120.29 (16) | C2—C11—C3 | 122.38 (16) |
| O2—C3—C13 | 119.21 (18) | C12—C11—C3 | 119.06 (17) |
| O2—C3—C11 | 122.56 (18) | C9—C12—C11 | 119.58 (18) |
| C13—C3—C11 | 118.22 (16) | C9—C12—C8 | 117.85 (17) |
| C5—C4—C13 | 120.20 (19) | C11—C12—C8 | 122.57 (17) |
| C5—C4—H4 | 119.9 | C4—C13—C14 | 118.95 (18) |
| C13—C4—H4 | 119.9 | C4—C13—C3 | 118.85 (17) |
| C4—C5—C6 | 120.9 (2) | C14—C13—C3 | 122.18 (17) |
| C4—C5—H5 | 119.6 | C7—C14—C13 | 120.27 (19) |
| C6—C5—H5 | 119.6 | C7—C14—C8 | 119.88 (18) |
| C5—C6—C7 | 119.6 (2) | C13—C14—C8 | 119.85 (18) |
| C5—C6—H6 | 120.2 | O4—C15—H15A | 109.5 |
| C7—C6—H6 | 120.2 | O4—C15—H15B | 109.5 |
| C14—C7—C6 | 120.1 (2) | H15A—C15—H15B | 109.5 |
| C14—C7—H7 | 120.0 | O4—C15—H15C | 109.5 |
| C6—C7—H7 | 119.9 | H15A—C15—H15C | 109.5 |
| O1—C8—C12 | 121.26 (19) | H15B—C15—H15C | 109.5 |
| O1—C8—C14 | 120.74 (18) | C1—O3—H3 | 109.5 |
| C12—C8—C14 | 117.99 (16) | C2—O4—C15 | 115.30 (16) |
| C10—C9—C12 | 121.52 (18) | H1W—O1W—H2W | 107.3 (16) |
| C10—C9—H9 | 119.2 | ||
| O3—C1—C2—O4 | 4.7 (3) | C3—C11—C12—C8 | −0.1 (3) |
| C10—C1—C2—O4 | −174.23 (17) | O1—C8—C12—C9 | −1.6 (3) |
| O3—C1—C2—C11 | −178.49 (17) | C14—C8—C12—C9 | 177.72 (16) |
| C10—C1—C2—C11 | 2.6 (3) | O1—C8—C12—C11 | 179.19 (17) |
| C13—C4—C5—C6 | 1.0 (3) | C14—C8—C12—C11 | −1.5 (3) |
| C4—C5—C6—C7 | 0.3 (3) | C5—C4—C13—C14 | −1.7 (3) |
| C5—C6—C7—C14 | −0.7 (3) | C5—C4—C13—C3 | 176.53 (17) |
| C12—C9—C10—C1 | −1.3 (3) | O2—C3—C13—C4 | −3.0 (3) |
| O3—C1—C10—C9 | −179.48 (18) | C11—C3—C13—C4 | 177.29 (16) |
| C2—C1—C10—C9 | −0.6 (3) | O2—C3—C13—C14 | 175.24 (18) |
| O4—C2—C11—C12 | 174.08 (16) | C11—C3—C13—C14 | −4.5 (3) |
| C1—C2—C11—C12 | −2.5 (3) | C6—C7—C14—C13 | −0.1 (3) |
| O4—C2—C11—C3 | −6.0 (3) | C6—C7—C14—C8 | −179.97 (18) |
| C1—C2—C11—C3 | 177.34 (16) | C4—C13—C14—C7 | 1.3 (3) |
| O2—C3—C11—C2 | 3.3 (3) | C3—C13—C14—C7 | −176.93 (17) |
| C13—C3—C11—C2 | −176.94 (16) | C4—C13—C14—C8 | −178.80 (17) |
| O2—C3—C11—C12 | −176.78 (18) | C3—C13—C14—C8 | 3.0 (3) |
| C13—C3—C11—C12 | 2.9 (3) | O1—C8—C14—C7 | −0.7 (3) |
| C10—C9—C12—C11 | 1.3 (3) | C12—C8—C14—C7 | 179.92 (16) |
| C10—C9—C12—C8 | −177.90 (17) | O1—C8—C14—C13 | 179.34 (18) |
| C2—C11—C12—C9 | 0.6 (3) | C12—C8—C14—C13 | 0.0 (3) |
| C3—C11—C12—C9 | −179.25 (16) | C11—C2—O4—C15 | 95.3 (2) |
| C2—C11—C12—C8 | 179.82 (16) | C1—C2—O4—C15 | −87.9 (2) |
| D—H···A | D—H | H···A | D···A | D—H···A |
| O1W—H1W···O2i | 0.86 (3) | 2.31 (2) | 2.960 (3) | 133 (3) |
| O1W—H2W···O4ii | 0.87 (3) | 2.30 (2) | 3.072 (3) | 149 (3) |
| O3—H3···O1W | 0.82 | 1.87 | 2.687 (2) | 173 |
| Symmetry codes: (i) x, y+1, z; (ii) −x+1, −y+1, −z+1. |
| D—H···A | D—H | H···A | D···A | D—H···A |
| O1W—H1W···O2i | 0.86 (3) | 2.31 (2) | 2.960 (3) | 133 (3) |
| O1W—H2W···O4ii | 0.87 (3) | 2.30 (2) | 3.072 (3) | 149 (3) |
| O3—H3···O1W | 0.82 | 1.87 | 2.687 (2) | 173 |
| Symmetry codes: (i) x, y+1, z; (ii) −x+1, −y+1, −z+1. |
The authors acknowledge South China University of Technology and Dongguan University of Technology for support of this work.
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Anthraquinone derivatives extracted from the roots of Morinda officinalis How (most common familiar name in China: Bajitian) have been used in China since ancient times to treat a wide range of symptoms including poor digestion, high blood pressure and immune deficiencies . Recent studies have demonstrated that they have multiple pharmacological actions (Kim et al., 2005). One component found in Morinda officinalis How, 1-Methoxy-2-hydroxyanthraquinone, is known as alizarin-1-methylether and exhibits a variety of potent biological effects such as antiviral and antimicrobial activities (Ali et al., 2000), antioxidant activity (Jia et al., 2007) and cyototoxic activity (Wu et al., 2003). We report here the structure of the monhydrate.
In the title compound (Fig. 1), the C-C bond lengths show normal values (Allen et al., 1987), and the C-O and C=O bond lengths are comparable to those observed in similar structures (Ng et al., 2005; Boonnak et al., 2005). The anthraquinone ring system is substantially planar, the dihedral angle between the two benzene rings being 3.07 (4)°. In the crystal structure, the crystal water connects with alizarin-1-methylether by O—H···.O hydrogen bonds.The molecules are self-assembled by O—H···.O hydrogen bonding interactions (Table 1 and Fig. 2) into a supramolecular network.