metal-organic compounds\(\def\hfill{\hskip 5em}\def\hfil{\hskip 3em}\def\eqno#1{\hfil {#1}}\)

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Bis[5-(2-naphth­yl)-1H-pyrazole-κN2]silver(I) nitrate

aDepartment of Chemistry, Zhengzhou University, Zhengzhou 450001, People's Republic of China, and bDepartment of Chemistry, University of Malaya, 50603 Kuala Lumpur, Malaysia
*Correspondence e-mail: seikweng@um.edu.my

(Received 20 July 2009; accepted 20 July 2009; online 25 July 2009)

The Ag atom in the title compound, [Ag(C13H10N2)2]NO3, shows an approximately linear coordination [N–Ag–N 162.6 (4)°]. The coordination geometry is distorted towards square-planar owing to two long Ag⋯O inter­actions [Ag⋯O = 2.634 (15) and 2.861 (13) Å]. In the crystal structure, the Ag atom lies on a special position of 2 site symmetry; the nitrate anion is disordered about the special position. The crystal under investigation was a racemic twin with a 33% minor twin component.

Related literature

This structure is the first report of a metal complex of the 5-(2-naphthyl)-1H-pyrazole; for the synthesis of this N-heterocycle, see: Yang & Raptis (2003[Yang, G. & Raptis, R. G. (2003). J. Heterocycl. Chem. 40, 659-664.]).

[Scheme 1]

Experimental

Crystal data
  • [Ag(C13H10N2)2]NO3

  • Mr = 558.34

  • Monoclinic, C 2

  • a = 13.911 (6) Å

  • b = 7.340 (1) Å

  • c = 12.669 (5) Å

  • β = 113.43 (2)°

  • V = 1186.9 (7) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 0.89 mm−1

  • T = 291 K

  • 0.20 × 0.18 × 0.16 mm

Data collection
  • Rigaku R-AXIS RAPID IP diffractometer

  • Absorption correction: multi-scan (ABSCOR; Higashi, 1995[Higashi, T. (1995). ABSCOR. Rigaku Corporation, Tokyo, Japan.]) Tmin = 0.843, Tmax = 0.871

  • 2268 measured reflections

  • 2056 independent reflections

  • 1752 reflections with I > 2σ(I)

  • Rint = 0.061

Refinement
  • R[F2 > 2σ(F2)] = 0.061

  • wR(F2) = 0.174

  • S = 1.09

  • 2056 reflections

  • 179 parameters

  • 32 restraints

  • H-atom parameters constrained

  • Δρmax = 0.36 e Å−3

  • Δρmin = −0.48 e Å−3

  • Absolute structure: Flack (1983[Flack, H. D. (1983). Acta Cryst. A39, 876-881.]), 353 Friedel pairs

  • Flack parameter: 0.33 (8)

Data collection: RAPID-AUTO (Rigaku, 1998[Rigaku (1998). RAPID-AUTO. Rigaku Corporation, Tokyo, Japan.]); cell refinement: RAPID-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002[Rigaku/MSC (2002). CrystalStructure. Rigaku/MSC Inc., The Woodlands, Texas, USA.]); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]); molecular graphics: X-SEED (Barbour, 2001[Barbour, L. J. (2001). J. Supramol. Chem. 1, 189-191.]); software used to prepare material for publication: publCIF (Westrip, 2009[Westrip, S. P. (2009). publCIF. In preparation.]).

Supporting information


Related literature top

This structure is the first report of a metal complex of the 3-(2-naphthyl)pyrazole; for the synthesis of this N-heterocycle, see: Yang & Raptis (2003).

Experimental top

3-(2-Naphthyl)pyrazole was prepared according to the literature method (Yang & Raptis, 2003). An acetonitrile solution (2 ml) of silver nitrate (0.02 mmol, 3.4 mg) was mixed with an ethanol solution (1 ml) of 3-(2-naphthyl)pyrazole (0.02 mmol, 4 mg). The pH value of the mixture was adjusted to about 5 by dilute nitric acid. The resulting solution was allowed to evaporate for two weeks to yield colorless crystals in 60% yield.

Refinement top

The measurements are complete to 94% at a 2θ of 55 °, but are complete to 98% at a 2θ of 50 °.

The nitrate group is disordered about the twofold rotation axis; the anion was allowed to refine off the symmetry element. The three N–O distances were restrained to within 0.01 Å of each other, as were the three O···O distances. The four atoms were restrained to be nearly planar, and their anisotropic temperature factors were restrained to be nearly isotropic. Carbon-bound H atoms were placed in calculated positions [C—H = 0.93, N–H 0.89 Å; U(H) = 1.2Ueq(C,N)].

The crystal under investigation is a racemic twin; the explicit refinement of the Flack parameter gave a minor twin component of 33%.

Computing details top

Data collection: RAPID-AUTO (Rigaku, 1998); cell refinement: RAPID-AUTO (Rigaku, 1998); data reduction: CrystalStructure (Rigaku/MSC, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2009).

Figures top
[Figure 1] Fig. 1. Thermal ellipsoid plot of the [Ag(C13H10N2)2][NO3], displacement ellipsoids are drawn at the 50% probability level. The nitrate anion is disordered about a special position; the disorder is not shown.
Bis[5-(2-naphthyl)-1H-pyrazole-κN2]silver(I) nitrate top
Crystal data top
[Ag(C13H10N2)2]NO3F(000) = 564
Mr = 558.34Dx = 1.562 Mg m3
Monoclinic, C2Mo Kα radiation, λ = 0.71073 Å
Hall symbol: C 2yCell parameters from 2056 reflections
a = 13.911 (6) Åθ = 1.8–27.5°
b = 7.340 (1) ŵ = 0.89 mm1
c = 12.669 (5) ÅT = 291 K
β = 113.43 (2)°Block, colorless
V = 1186.9 (7) Å30.20 × 0.18 × 0.16 mm
Z = 2
Data collection top
Rigaku R-AXIS RAPID IP
diffractometer
2056 independent reflections
Radiation source: fine-focus sealed tube1752 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.061
ω scansθmax = 27.5°, θmin = 1.8°
Absorption correction: multi-scan
(ABSCOR; Higashi, 1995)
h = 178
Tmin = 0.843, Tmax = 0.871k = 97
2268 measured reflectionsl = 1416
Refinement top
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.061 w = 1/[σ2(Fo2) + (0.1009P)2 + 2.0218P]
where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.174(Δ/σ)max = 0.001
S = 1.09Δρmax = 0.36 e Å3
2056 reflectionsΔρmin = 0.48 e Å3
179 parametersExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
32 restraintsExtinction coefficient: 0.010 (2)
Primary atom site location: structure-invariant direct methodsAbsolute structure: Flack (1983), 353 Friedel pairs
Secondary atom site location: difference Fourier mapAbsolute structure parameter: 0.33 (8)
Crystal data top
[Ag(C13H10N2)2]NO3V = 1186.9 (7) Å3
Mr = 558.34Z = 2
Monoclinic, C2Mo Kα radiation
a = 13.911 (6) ŵ = 0.89 mm1
b = 7.340 (1) ÅT = 291 K
c = 12.669 (5) Å0.20 × 0.18 × 0.16 mm
β = 113.43 (2)°
Data collection top
Rigaku R-AXIS RAPID IP
diffractometer
2056 independent reflections
Absorption correction: multi-scan
(ABSCOR; Higashi, 1995)
1752 reflections with I > 2σ(I)
Tmin = 0.843, Tmax = 0.871Rint = 0.061
2268 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.061H-atom parameters constrained
wR(F2) = 0.174Δρmax = 0.36 e Å3
S = 1.09Δρmin = 0.48 e Å3
2056 reflectionsAbsolute structure: Flack (1983), 353 Friedel pairs
179 parametersAbsolute structure parameter: 0.33 (8)
32 restraints
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/UeqOcc. (<1)
Ag10.50000.5000 (2)0.50000.0696 (4)
O10.5305 (13)0.8398 (18)0.4537 (12)0.079 (4)0.50
O20.4805 (13)1.1184 (16)0.4497 (12)0.078 (4)0.50
O30.4805 (13)0.9378 (17)0.5844 (11)0.079 (4)0.50
N10.6133 (6)0.4563 (10)0.4293 (6)0.060 (2)
N20.6235 (6)0.2913 (10)0.3832 (6)0.0565 (16)
H20.58920.19070.38680.068*
N30.4971 (9)0.9654 (11)0.4961 (9)0.062 (3)0.50
C10.6779 (7)0.5684 (15)0.4085 (8)0.068 (2)
H10.68790.68980.43120.082*
C20.7299 (7)0.479 (3)0.3471 (7)0.068 (3)
H2A0.77880.52970.32250.082*
C30.6928 (7)0.3009 (12)0.3311 (7)0.0546 (18)
C40.7151 (6)0.1443 (12)0.2722 (7)0.0537 (18)
C50.6475 (6)0.008 (3)0.2316 (6)0.0616 (18)
H50.58740.01570.24670.074*
C60.6685 (8)0.1416 (16)0.1720 (8)0.070 (2)
H60.62110.23670.14310.084*
C70.7620 (8)0.1405 (17)0.1522 (8)0.067 (2)
C80.7883 (9)0.282 (2)0.0913 (9)0.080 (3)
H80.74400.38210.06390.096*
C90.8788 (10)0.271 (2)0.0733 (9)0.096 (4)
H90.89480.36370.03280.115*
C100.9456 (8)0.130 (3)0.1125 (10)0.094 (4)
H101.00690.12750.09970.113*
C110.9243 (6)0.009 (4)0.1703 (6)0.082 (3)
H110.97190.10390.19660.098*
C120.8311 (6)0.014 (3)0.1924 (6)0.060 (2)
C130.8064 (6)0.1497 (16)0.2520 (8)0.063 (2)
H130.85190.24790.27950.075*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Ag10.0884 (6)0.0661 (6)0.0753 (6)0.0000.0547 (5)0.000
O10.077 (7)0.070 (8)0.097 (8)0.012 (6)0.043 (6)0.013 (7)
O20.089 (8)0.058 (7)0.093 (8)0.009 (6)0.043 (7)0.006 (6)
O30.085 (7)0.088 (9)0.076 (7)0.007 (6)0.045 (6)0.005 (6)
N10.076 (4)0.052 (6)0.062 (4)0.002 (3)0.039 (3)0.003 (3)
N20.072 (4)0.050 (4)0.056 (4)0.001 (3)0.034 (4)0.004 (3)
N30.054 (4)0.071 (9)0.067 (5)0.001 (10)0.029 (4)0.005 (10)
C10.071 (5)0.074 (6)0.060 (5)0.009 (4)0.027 (4)0.003 (4)
C20.068 (4)0.072 (9)0.068 (4)0.003 (6)0.033 (3)0.001 (6)
C30.060 (4)0.057 (4)0.054 (4)0.001 (3)0.029 (4)0.004 (3)
C40.055 (4)0.053 (4)0.058 (5)0.005 (3)0.028 (4)0.009 (4)
C50.071 (4)0.060 (5)0.067 (4)0.008 (7)0.041 (3)0.006 (8)
C60.075 (5)0.074 (6)0.064 (6)0.004 (5)0.031 (5)0.002 (5)
C70.077 (5)0.085 (7)0.048 (5)0.008 (5)0.034 (4)0.004 (4)
C80.090 (6)0.089 (8)0.068 (5)0.011 (6)0.037 (5)0.017 (6)
C90.108 (9)0.124 (11)0.065 (6)0.030 (8)0.043 (6)0.015 (7)
C100.053 (5)0.160 (14)0.066 (6)0.022 (6)0.019 (5)0.023 (7)
C110.053 (4)0.141 (10)0.055 (4)0.004 (10)0.024 (3)0.018 (11)
C120.056 (3)0.081 (7)0.044 (3)0.002 (7)0.021 (3)0.003 (7)
C130.051 (4)0.091 (7)0.056 (5)0.001 (4)0.032 (4)0.004 (4)
Geometric parameters (Å, º) top
Ag1—N1i2.124 (7)C4—C51.42 (2)
Ag1—N12.124 (7)C5—C61.34 (2)
Ag1—O12.634 (15)C5—H50.9300
Ag1—O2ii2.861 (13)C6—C71.419 (13)
O1—N31.246 (10)C6—H60.9300
O2—N31.245 (10)C7—C81.427 (15)
O3—N31.246 (10)C7—C121.44 (2)
N1—C11.319 (12)C8—C91.369 (17)
N1—N21.375 (10)C8—H80.9300
N2—C31.370 (11)C9—C101.35 (2)
N2—H20.8900C9—H90.9300
C1—C21.416 (16)C10—C111.35 (3)
C1—H10.9300C10—H100.9300
C2—C31.39 (2)C11—C121.432 (10)
C2—H2A0.9300C11—H110.9300
C3—C41.469 (12)C12—C131.38 (2)
C4—C131.393 (11)C13—H130.9300
N1i—Ag1—N1162.6 (4)C6—C5—C4121.3 (7)
N1i—Ag1—O1116.7 (4)C6—C5—H5119.4
N1—Ag1—O180.6 (4)C4—C5—H5119.4
N1i—Ag1—O2ii85.7 (4)C5—C6—C7121.2 (10)
N1—Ag1—O2ii77.2 (4)C5—C6—H6119.4
O1—Ag1—O2ii152.4 (5)C7—C6—H6119.4
N3—O1—Ag1119.0 (7)C6—C7—C8122.8 (11)
C1—N1—N2105.7 (7)C6—C7—C12118.1 (10)
C1—N1—Ag1131.9 (7)C8—C7—C12119.1 (9)
N2—N1—Ag1122.0 (5)C9—C8—C7119.8 (12)
C3—N2—N1111.7 (7)C9—C8—H8120.1
C3—N2—H2124.1C7—C8—H8120.1
N1—N2—H2124.1C10—C9—C8122.0 (11)
O2—N3—O1119.7 (7)C10—C9—H9119.0
O2—N3—O3120.3 (7)C8—C9—H9119.0
O1—N3—O3120.0 (7)C11—C10—C9120.7 (11)
N1—C1—C2111.1 (12)C11—C10—H10119.6
N1—C1—H1124.5C9—C10—H10119.6
C2—C1—H1124.5C10—C11—C12122 (2)
C3—C2—C1105.8 (9)C10—C11—H11118.8
C3—C2—H2A127.1C12—C11—H11118.8
C1—C2—H2A127.1C13—C12—C11124.7 (18)
C2—C3—N2105.6 (7)C13—C12—C7119.2 (7)
C2—C3—C4132.0 (7)C11—C12—C7116.1 (17)
N2—C3—C4122.4 (8)C12—C13—C4121.7 (10)
C13—C4—C5118.4 (8)C12—C13—H13119.2
C13—C4—C3117.6 (8)C4—C13—H13119.2
C5—C4—C3123.9 (8)
N1i—Ag1—O1—N315.5 (10)C2—C3—C4—C5158.6 (11)
N1—Ag1—O1—N3166.2 (9)N2—C3—C4—C520.6 (14)
O2ii—Ag1—O1—N3157.0 (11)C13—C4—C5—C62.1 (16)
N1i—Ag1—N1—C1170.0 (8)C3—C4—C5—C6175.7 (10)
O1—Ag1—N1—C115.2 (9)C4—C5—C6—C73.3 (17)
O2ii—Ag1—N1—C1178.7 (9)C5—C6—C7—C8178.5 (11)
N1i—Ag1—N1—N217.3 (6)C5—C6—C7—C123.4 (15)
O1—Ag1—N1—N2157.4 (8)C6—C7—C8—C9178.8 (10)
O2ii—Ag1—N1—N26.0 (6)C12—C7—C8—C90.8 (16)
C1—N1—N2—C31.4 (10)C7—C8—C9—C100.7 (19)
Ag1—N1—N2—C3173.0 (5)C8—C9—C10—C111 (2)
Ag1—O1—N3—O2157.6 (9)C9—C10—C11—C120 (2)
Ag1—O1—N3—O322.4 (10)C10—C11—C12—C13179.1 (13)
N2—N1—C1—C20.9 (10)C10—C11—C12—C72 (2)
Ag1—N1—C1—C2172.6 (6)C6—C7—C12—C132.5 (16)
N1—C1—C2—C30.2 (11)C8—C7—C12—C13179.5 (11)
C1—C2—C3—N20.7 (10)C6—C7—C12—C11179.9 (11)
C1—C2—C3—C4178.6 (9)C8—C7—C12—C111.8 (16)
N1—N2—C3—C21.3 (10)C11—C12—C13—C4178.8 (12)
N1—N2—C3—C4178.1 (8)C7—C12—C13—C41.4 (17)
C2—C3—C4—C1319.2 (15)C5—C4—C13—C121.2 (15)
N2—C3—C4—C13161.6 (8)C3—C4—C13—C12176.7 (10)
Symmetry codes: (i) x+1, y, z+1; (ii) x, y1, z.
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N2—H2···O2ii0.892.042.76 (2)137
N2—H2···O3iii0.892.193.08 (2)173
Symmetry codes: (ii) x, y1, z; (iii) x+1, y1, z+1.

Experimental details

Crystal data
Chemical formula[Ag(C13H10N2)2]NO3
Mr558.34
Crystal system, space groupMonoclinic, C2
Temperature (K)291
a, b, c (Å)13.911 (6), 7.340 (1), 12.669 (5)
β (°) 113.43 (2)
V3)1186.9 (7)
Z2
Radiation typeMo Kα
µ (mm1)0.89
Crystal size (mm)0.20 × 0.18 × 0.16
Data collection
DiffractometerRigaku R-AXIS RAPID IP
diffractometer
Absorption correctionMulti-scan
(ABSCOR; Higashi, 1995)
Tmin, Tmax0.843, 0.871
No. of measured, independent and
observed [I > 2σ(I)] reflections
2268, 2056, 1752
Rint0.061
(sin θ/λ)max1)0.650
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.061, 0.174, 1.09
No. of reflections2056
No. of parameters179
No. of restraints32
H-atom treatmentH-atom parameters constrained
Δρmax, Δρmin (e Å3)0.36, 0.48
Absolute structureFlack (1983), 353 Friedel pairs
Absolute structure parameter0.33 (8)

Computer programs: RAPID-AUTO (Rigaku, 1998), CrystalStructure (Rigaku/MSC, 2002), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), X-SEED (Barbour, 2001), publCIF (Westrip, 2009).

 

Acknowledgements

We thank the Education Department of Henan Province, Zhengzhou University and the University of Malaya for supporting this study.

References

First citationBarbour, L. J. (2001). J. Supramol. Chem. 1, 189–191.  CrossRef CAS Google Scholar
First citationFlack, H. D. (1983). Acta Cryst. A39, 876–881.  CrossRef CAS Web of Science IUCr Journals Google Scholar
First citationHigashi, T. (1995). ABSCOR. Rigaku Corporation, Tokyo, Japan.  Google Scholar
First citationRigaku (1998). RAPID-AUTO. Rigaku Corporation, Tokyo, Japan.  Google Scholar
First citationRigaku/MSC (2002). CrystalStructure. Rigaku/MSC Inc., The Woodlands, Texas, USA.  Google Scholar
First citationSheldrick, G. M. (2008). Acta Cryst. A64, 112–122.  Web of Science CrossRef CAS IUCr Journals Google Scholar
First citationWestrip, S. P. (2009). publCIF. In preparation.  Google Scholar
First citationYang, G. & Raptis, R. G. (2003). J. Heterocycl. Chem. 40, 659–664.  CrossRef CAS Google Scholar

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ISSN: 2056-9890
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