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bt5123 scheme

Acta Cryst. (2009). E65, m1522    [ doi:10.1107/S1600536809045693 ]

Tris(ethylenediamine)zinc(II) hexafluoridosilicate

Y. Li, Q. Shi, A. M. Z. Slawin, J. D. Woollins and J. Dong

Abstract top

The title compound, [Zn(C2H8N2)3](SiF6), was synthesized ionothermally using choline chloride-imidazolidone as solvent and template provider. In the crystal structure, the anions and cations are located on special positions of site symmetry 3.2 and show a typical octahedral geometry. The ZnII ion is coordinated by six N atoms from three ethylenediamine molecules. The crystal structure displays weak hydrogen bonding between [SiF6]2- anions and the ethylenediamine NH hydrogen atoms.

Comment top

A large number of salts with the general formula MG6LR6, where M is a bivalent metal, G may be water or ammonia, L is a quadrivalent element like Si, Sn, Ti or Zr, and R may be Cl, F or CN, (Ray et al., 1973), were studied. We report a similar type of the title salt containing organic molecules. The molecule of the title salt, shown in Fig. 1, consists of one Zn(C2N2H8)3 cation and one SiF6 anion. The coordination of ZnII centers through bridging-bidentate ethylenediamine groups forms a wind-stick-like cluster. The Zn(C2N2H8)3 cluster and SiF6 octahedra are stacked alternately along the threefold axis in approximately CsCl-type packing.

Related literature top

For related structures, see: Ray et al. (1973); Bernhardt & Riley (2003); Cernak et al. (1984); Emsley et al. (1989); Cheng et al. (2008).

Experimental top

A typical synthetic procedure for Zn(C2N2H8)3.SiF6 was as follows: a Teflon-lined autoclave (volume 15 ml) was charged with the ionic liquid [composed of choline chloride (1630 mg, 11.4 mmol) and imidazolidone (2.045 g, 22.8 mmol)], zinc acetate (168 mg, 0.74 mmol), NH4F (71 mg, 1.85 mmol), and silica (49 mg, 0.74 mmol) and heated in an oven at 180 °C for 3 days. Ethylenediamine(C2N2H8), derived from decomposition of the imidazolidone component of the deep-eutectic solvent (DES) itself, is delivered to the synthesis. The synthesized samples were washed with distilled water in an ultrasonic bath, then washed with acetone, and dried at room temperature in air. The colorless crystals of the title salt were abtained with suitable size for single-crystal X-ray analysis.

Refinement top

All H atoms were fixed geometrically (C—H = 0.99 Å, N—H = 0.92 Å) and treated as riding with Uiso(H) = 1.2Ueq of the parent atom.

Computing details top

Data collection: CrystalClear (Rigaku, 2004); cell refinement: CrystalClear (Rigaku, 2004); data reduction: CrystalClear (Rigaku, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).

Figures top
[Figure 1] Fig. 1. The molecular structure of the title compound with displacement ellipsoids drawn at the 50% probability level.
Tris(ethylenediamine)zinc(II) hexafluoridosilicate top
Crystal data top
[Zn(C2H8N2)3](SiF6)Dx = 1.804 Mg m3
Mr = 387.77Mo Kα radiation, λ = 0.71073 Å
Trigonal, P6322Cell parameters from 1402 reflections
Hall symbol: P 6c 2cθ = 6.6–54.6°
a = 9.192 (2) ŵ = 1.87 mm1
c = 9.755 (3) ÅT = 93 K
V = 713.8 (3) Å3Prism, colorless
Z = 20.10 × 0.10 × 0.10 mm
F(000) = 400
Data collection top
Rigaku Mercury CCD
diffractometer
534 independent reflections
Radiation source: rotating anode499 reflections with I > 2σ(I)
confocalRint = 0.045
Detector resolution: 0.83 pixels mm-1θmax = 27.4°, θmin = 3.3°
ω scansh = 1011
Absorption correction: multi-scan
(CrystalClear; Rigaku, 2004)
k = 1011
Tmin = 0.835, Tmax = 0.835l = 119
4809 measured reflections
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.027H-atom parameters constrained
wR(F2) = 0.059 w = 1/[σ2(Fo2) + (0.0158P)2 + 0.5912P]
where P = (Fo2 + 2Fc2)/3
S = 1.11(Δ/σ)max < 0.001
534 reflectionsΔρmax = 0.51 e Å3
32 parametersΔρmin = 0.38 e Å3
0 restraintsAbsolute structure: Flack (1983), 177 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.01 (3)
Crystal data top
[Zn(C2H8N2)3](SiF6)Z = 2
Mr = 387.77Mo Kα radiation
Trigonal, P6322µ = 1.87 mm1
a = 9.192 (2) ÅT = 93 K
c = 9.755 (3) Å0.10 × 0.10 × 0.10 mm
V = 713.8 (3) Å3
Data collection top
Rigaku Mercury CCD
diffractometer
534 independent reflections
Absorption correction: multi-scan
(CrystalClear; Rigaku, 2004)
499 reflections with I > 2σ(I)
Tmin = 0.835, Tmax = 0.835Rint = 0.045
4809 measured reflectionsθmax = 27.4°
Refinement top
R[F2 > 2σ(F2)] = 0.027H-atom parameters constrained
wR(F2) = 0.059Δρmax = 0.51 e Å3
S = 1.11Δρmin = 0.38 e Å3
534 reflectionsAbsolute structure: Flack (1983), 177 Friedel pairs
32 parametersFlack parameter: 0.01 (3)
0 restraints
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
Si10.33330.66670.75000.0135 (3)
F10.48288 (18)0.6657 (2)0.85081 (14)0.0250 (3)
Zn10.66670.33330.75000.01508 (18)
N10.8544 (2)0.5434 (2)0.87149 (19)0.0191 (4)
H1A0.82770.52430.96310.023*
H1B0.95840.55390.85890.023*
C10.8584 (4)0.6997 (3)0.8277 (2)0.0222 (5)
H2A0.96550.79860.85660.027*
H2B0.76510.70700.87160.027*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Si10.0151 (4)0.0151 (4)0.0102 (7)0.0076 (2)0.0000.000
F10.0260 (7)0.0352 (8)0.0183 (7)0.0186 (7)0.0057 (6)0.0011 (7)
Zn10.0169 (2)0.0169 (2)0.0115 (3)0.00843 (11)0.0000.000
N10.0185 (10)0.0240 (11)0.0137 (11)0.0097 (9)0.0018 (8)0.0003 (8)
C10.0234 (13)0.0195 (11)0.0225 (12)0.0099 (13)0.0031 (12)0.0037 (8)
Geometric parameters (Å, °) top
Si1—F1i1.6938 (13)Zn1—N1v2.186 (2)
Si1—F1ii1.6938 (13)Zn1—N1viii2.1863 (19)
Si1—F1iii1.6938 (14)Zn1—N1ix2.1863 (19)
Si1—F1iv1.6938 (14)N1—C11.482 (3)
Si1—F11.6938 (13)N1—H1A0.9200
Si1—F1v1.6938 (13)N1—H1B0.9200
Zn1—N1vi2.1863 (19)C1—C1viii1.523 (4)
Zn1—N1vii2.1863 (19)C1—H2A0.9900
Zn1—N12.186 (2)C1—H2B0.9900
F1i—Si1—F1ii90.69 (10)N1vi—Zn1—N1viii93.40 (7)
F1i—Si1—F1iii89.68 (7)N1vii—Zn1—N1viii170.67 (11)
F1ii—Si1—F1iii89.95 (10)N1—Zn1—N1viii80.19 (10)
F1i—Si1—F1iv89.95 (10)N1v—Zn1—N1viii93.40 (7)
F1ii—Si1—F1iv89.68 (7)N1vi—Zn1—N1ix170.67 (11)
F1iii—Si1—F1iv179.47 (11)N1vii—Zn1—N1ix93.40 (7)
F1i—Si1—F1179.47 (11)N1—Zn1—N1ix93.40 (7)
F1ii—Si1—F189.68 (7)N1v—Zn1—N1ix80.19 (10)
F1iii—Si1—F190.69 (10)N1viii—Zn1—N1ix93.74 (11)
F1iv—Si1—F189.68 (7)C1—N1—Zn1109.01 (14)
F1i—Si1—F1v89.68 (7)C1—N1—H1A109.9
F1ii—Si1—F1v179.47 (11)Zn1—N1—H1A109.9
F1iii—Si1—F1v89.68 (7)C1—N1—H1B109.9
F1iv—Si1—F1v90.69 (10)Zn1—N1—H1B109.9
F1—Si1—F1v89.95 (10)H1A—N1—H1B108.3
N1vi—Zn1—N1vii80.19 (10)N1—C1—C1viii109.52 (17)
N1vi—Zn1—N193.74 (11)N1—C1—H2A109.8
N1vii—Zn1—N193.40 (7)C1viii—C1—H2A109.8
N1vi—Zn1—N1v93.40 (7)N1—C1—H2B109.8
N1vii—Zn1—N1v93.74 (11)C1viii—C1—H2B109.8
N1—Zn1—N1v170.67 (11)H2A—C1—H2B108.2
N1vi—Zn1—N1—C1106.99 (17)N1ix—Zn1—N1—C179.03 (19)
N1vii—Zn1—N1—C1172.64 (16)Zn1—N1—C1—C1viii39.9 (3)
N1viii—Zn1—N1—C114.19 (13)
Symmetry codes: (i) −x+y, y, −z+3/2; (ii) −y+1, xy+1, z; (iii) x, xy+1, −z+3/2; (iv) −x+y, −x+1, z; (v) −y+1, −x+1, −z+3/2; (vi) x, xy, −z+3/2; (vii) −x+y+1, −x+1, z; (viii) −x+y+1, y, −z+3/2; (ix) −y+1, xy, z.
Hydrogen-bond geometry (Å, °) top
D—H···AD—HH···AD···AD—H···A
N1—H1A···F1x0.922.263.113 (3)155
N1—H1A···F1xi0.922.493.239 (3)139
N1—H1B···F1vii0.922.253.153 (3)166
Symmetry codes: (x) y, x, −z+2; (xi) xy+1, −y+1, −z+2; (vii) −x+y+1, −x+1, z.
Table 1
Hydrogen-bond geometry (Å, °)
top
D—H···AD—HH···AD···AD—H···A
N1—H1A···F1i0.922.263.113 (3)155
N1—H1A···F1ii0.922.493.239 (3)139
N1—H1B···F1iii0.922.253.153 (3)166
Symmetry codes: (i) y, x, −z+2; (ii) xy+1, −y+1, −z+2; (iii) −x+y+1, −x+1, z.
Acknowledgements top

The authors are grateful to the Engineering and Physical Science Research Council (EPSRC, UK) and the National Natural Science Funds of China (grant Nos. 20573077, 50672063) for financial support.

references
References top

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