supplementary materials

Propane-1,3-diyl bis(4-aminobenzoate)
Molecules of the title compound, C17H18N2O4, lie on a twofold rotation axis that passes through the central methylene C atom. The molecules adopt a `V' shape and the trimethylene unit assumes a gauche-gauche conformation. The amino N atom shows a nonplanar coordination. Adjacent molecules are connected by N-H
O hydrogen bonds into chains running along [001]. Furthermore, N-H
N hydrogen bonds connect these chains into a three-dimensional network.
The compound was returned unchanged but in a crystalline form in an unsuccessful
condensation with o-vanillin in ethanol medium.
Carbon-bound H-atoms were placed in calculated positions [C–H 0.95–0.99 Å,
U(H) 1.2U(C)] and were included in the refinement in the riding
model approximation. The amino H-atoms were located in a difference Fourier
map, and were refined isotropically
with a distance restraint of N–H 0.86±0.01 Å.
822 Friedel pairs were merged.
Data collection: APEX2 (Bruker, 2009); cell refinement: SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).
Propane-1,3-diyl bis(4-aminobenzoate)
top
Crystal data top
| C17H18N2O4 | F(000) = 332 |
| Mr = 314.33 | Dx = 1.242 Mg m−3 |
| Monoclinic, C2 | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: C 2y | Cell parameters from 915 reflections |
| a = 23.725 (5) Å | θ = 2.6–26.8° |
| b = 4.5109 (9) Å | µ = 0.09 mm−1 |
| c = 8.2171 (17) Å | T = 100 K |
| β = 107.173 (3)° | Plate, yellow |
| V = 840.2 (3) Å3 | 0.35 × 0.35 × 0.02 mm |
| Z = 2 | |
Data collection top
Bruker SMART APEX diffractometer | 788 reflections with I > 2σ(I) |
| Radiation source: fine-focus sealed tube | Rint = 0.090 |
| graphite | θmax = 27.5°, θmin = 1.8° |
| ω scans | h = −30→29 |
| 3936 measured reflections | k = −5→5 |
| 1082 independent reflections | l = −10→10 |
Refinement top
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.043 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.109 | H atoms treated by a mixture of independent and constrained refinement |
| S = 0.96 | w = 1/[σ2(Fo2) + (0.0523P)2] where P = (Fo2 + 2Fc2)/3 |
| 1082 reflections | (Δ/σ)max = 0.001 |
| 113 parameters | Δρmax = 0.24 e Å−3 |
| 3 restraints | Δρmin = −0.24 e Å−3 |
Crystal data top
| C17H18N2O4 | V = 840.2 (3) Å3 |
| Mr = 314.33 | Z = 2 |
| Monoclinic, C2 | Mo Kα radiation |
| a = 23.725 (5) Å | µ = 0.09 mm−1 |
| b = 4.5109 (9) Å | T = 100 K |
| c = 8.2171 (17) Å | 0.35 × 0.35 × 0.02 mm |
| β = 107.173 (3)° | |
Data collection top
Bruker SMART APEX diffractometer | 788 reflections with I > 2σ(I) |
| 3936 measured reflections | Rint = 0.090 |
| 1082 independent reflections | θmax = 27.5° |
Refinement top
| R[F2 > 2σ(F2)] = 0.043 | H atoms treated by a mixture of independent and constrained refinement |
| wR(F2) = 0.109 | Δρmax = 0.24 e Å−3 |
| S = 0.96 | Δρmin = −0.24 e Å−3 |
| 1082 reflections | Absolute structure: ? |
| 113 parameters | Flack parameter: ? |
| 3 restraints | Rogers parameter: ? |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top| | x | y | z | Uiso*/Ueq | Occ. (<1) |
| O1 | 0.42724 (7) | 0.4987 (4) | 0.0488 (2) | 0.0262 (5) | |
| O2 | 0.35969 (8) | 0.7580 (5) | −0.1476 (2) | 0.0304 (5) | |
| N1 | 0.29701 (11) | 1.0783 (6) | 0.5367 (3) | 0.0298 (6) | |
| C1 | 0.5000 | 0.1862 (10) | 0.0000 | 0.0279 (10) | |
| H1A | 0.5095 | 0.0569 | −0.0857 | 0.033* | 0.50 |
| H1B | 0.4905 | 0.0569 | 0.0857 | 0.033* | 0.50 |
| C2 | 0.44676 (11) | 0.3705 (7) | −0.0862 (3) | 0.0263 (7) | |
| H2A | 0.4572 | 0.5279 | −0.1562 | 0.032* | |
| H2B | 0.4153 | 0.2454 | −0.1609 | 0.032* | |
| C3 | 0.38135 (11) | 0.6876 (7) | 0.0010 (3) | 0.0244 (7) | |
| C4 | 0.36179 (11) | 0.7924 (7) | 0.1432 (3) | 0.0228 (6) | |
| C5 | 0.31600 (11) | 0.9969 (7) | 0.1134 (3) | 0.0260 (7) | |
| H5 | 0.2991 | 1.0721 | 0.0016 | 0.031* | |
| C6 | 0.29486 (12) | 1.0917 (7) | 0.2423 (3) | 0.0286 (7) | |
| H6 | 0.2631 | 1.2289 | 0.2187 | 0.034* | |
| C7 | 0.31969 (11) | 0.9879 (7) | 0.4094 (3) | 0.0252 (7) | |
| C8 | 0.36569 (11) | 0.7851 (8) | 0.4393 (3) | 0.0295 (7) | |
| H8 | 0.3830 | 0.7123 | 0.5514 | 0.035* | |
| C9 | 0.38646 (11) | 0.6885 (8) | 0.3103 (3) | 0.0282 (7) | |
| H9 | 0.4179 | 0.5495 | 0.3338 | 0.034* | |
| H11 | 0.3137 (17) | 1.032 (12) | 0.641 (2) | 0.098 (16)* | |
| H12 | 0.2748 (10) | 1.233 (4) | 0.519 (3) | 0.025 (8)* | |
Atomic displacement parameters (Å2) top| | U11 | U22 | U33 | U12 | U13 | U23 |
| O1 | 0.0204 (9) | 0.0351 (12) | 0.0206 (9) | 0.0041 (10) | 0.0021 (7) | 0.0031 (9) |
| O2 | 0.0239 (10) | 0.0453 (13) | 0.0165 (9) | 0.0042 (10) | −0.0024 (7) | 0.0029 (10) |
| N1 | 0.0272 (14) | 0.0364 (17) | 0.0227 (13) | 0.0056 (12) | 0.0025 (11) | 0.0016 (12) |
| C1 | 0.021 (2) | 0.030 (3) | 0.029 (2) | 0.000 | 0.0034 (16) | 0.000 |
| C2 | 0.0205 (13) | 0.0329 (17) | 0.0243 (14) | −0.0040 (13) | 0.0046 (11) | −0.0024 (13) |
| C3 | 0.0172 (13) | 0.0302 (17) | 0.0224 (13) | −0.0048 (13) | 0.0005 (11) | 0.0009 (13) |
| C4 | 0.0163 (12) | 0.0304 (17) | 0.0183 (12) | −0.0025 (12) | −0.0001 (10) | 0.0023 (11) |
| C5 | 0.0190 (13) | 0.0322 (17) | 0.0193 (13) | −0.0007 (14) | −0.0058 (11) | 0.0043 (13) |
| C6 | 0.0191 (14) | 0.0368 (19) | 0.0236 (14) | 0.0029 (13) | −0.0031 (12) | 0.0038 (13) |
| C7 | 0.0186 (13) | 0.0335 (18) | 0.0202 (13) | −0.0060 (14) | 0.0006 (10) | 0.0005 (13) |
| C8 | 0.0218 (14) | 0.043 (2) | 0.0179 (13) | 0.0039 (14) | −0.0026 (11) | 0.0090 (14) |
| C9 | 0.0181 (14) | 0.0397 (19) | 0.0237 (14) | 0.0030 (14) | 0.0012 (11) | 0.0050 (14) |
Geometric parameters (Å, °) top
| O1—C3 | 1.347 (3) | C3—C4 | 1.457 (4) |
| O1—C2 | 1.444 (3) | C4—C5 | 1.391 (4) |
| O2—C3 | 1.219 (3) | C4—C9 | 1.405 (3) |
| N1—C7 | 1.372 (3) | C5—C6 | 1.368 (4) |
| N1—H11 | 0.858 (10) | C5—H5 | 0.9500 |
| N1—H12 | 0.861 (10) | C6—C7 | 1.405 (4) |
| C1—C2 | 1.503 (4) | C6—H6 | 0.9500 |
| C1—C2i | 1.503 (4) | C7—C8 | 1.389 (4) |
| C1—H1A | 0.9900 | C8—C9 | 1.365 (4) |
| C1—H1B | 0.9900 | C8—H8 | 0.9500 |
| C2—H2A | 0.9900 | C9—H9 | 0.9500 |
| C2—H2B | 0.9900 | | |
| | | |
| C3—O1—C2 | 116.39 (19) | C5—C4—C9 | 118.1 (2) |
| C7—N1—H11 | 121 (3) | C5—C4—C3 | 119.4 (2) |
| C7—N1—H12 | 118.1 (19) | C9—C4—C3 | 122.4 (2) |
| H11—N1—H12 | 116 (4) | C6—C5—C4 | 121.1 (2) |
| C2—C1—C2i | 112.9 (4) | C6—C5—H5 | 119.4 |
| C2—C1—H1A | 109.0 | C4—C5—H5 | 119.4 |
| C2i—C1—H1A | 109.0 | C5—C6—C7 | 120.6 (3) |
| C2—C1—H1B | 109.0 | C5—C6—H6 | 119.7 |
| C2i—C1—H1B | 109.0 | C7—C6—H6 | 119.7 |
| H1A—C1—H1B | 107.8 | N1—C7—C8 | 121.7 (2) |
| O1—C2—C1 | 105.94 (18) | N1—C7—C6 | 120.0 (3) |
| O1—C2—H2A | 110.5 | C8—C7—C6 | 118.2 (2) |
| C1—C2—H2A | 110.5 | C9—C8—C7 | 121.2 (3) |
| O1—C2—H2B | 110.5 | C9—C8—H8 | 119.4 |
| C1—C2—H2B | 110.5 | C7—C8—H8 | 119.4 |
| H2A—C2—H2B | 108.7 | C8—C9—C4 | 120.7 (3) |
| O2—C3—O1 | 121.5 (2) | C8—C9—H9 | 119.7 |
| O2—C3—C4 | 125.4 (3) | C4—C9—H9 | 119.7 |
| O1—C3—C4 | 113.1 (2) | | |
| | | |
| C3—O1—C2—C1 | 176.5 (2) | C3—C4—C5—C6 | 177.4 (3) |
| C2i—C1—C2—O1 | −71.92 (18) | C4—C5—C6—C7 | 1.1 (4) |
| C2—O1—C3—O2 | −3.8 (4) | C5—C6—C7—N1 | −178.2 (3) |
| C2—O1—C3—C4 | 176.2 (2) | C5—C6—C7—C8 | −0.6 (4) |
| O2—C3—C4—C5 | −2.2 (4) | N1—C7—C8—C9 | 177.6 (3) |
| O1—C3—C4—C5 | 177.8 (3) | C6—C7—C8—C9 | 0.1 (5) |
| O2—C3—C4—C9 | 176.1 (3) | C7—C8—C9—C4 | 0.1 (5) |
| O1—C3—C4—C9 | −4.0 (4) | C5—C4—C9—C8 | 0.3 (4) |
| C9—C4—C5—C6 | −0.9 (4) | C3—C4—C9—C8 | −177.9 (3) |
| Symmetry codes: (i) −x+1, y, −z. |
Hydrogen-bond geometry (Å, °) top
| D—H···A | D—H | H···A | D···A | D—H···A |
| N1—H11···O2ii | 0.86 (1) | 2.15 (2) | 2.958 (3) | 157 (5) |
| N1—H12···N1iii | 0.86 (1) | 2.25 (1) | 3.104 (3) | 169 (2) |
| Symmetry codes: (ii) x, y, z+1; (iii) −x+1/2, y+1/2, −z+1. |
Table 1
Hydrogen-bond geometry (Å, °) top
| D—H···A | D—H | H···A | D···A | D—H···A |
| N1—H11···O2i | 0.86 (1) | 2.15 (2) | 2.958 (3) | 157 (5) |
| N1—H12···N1ii | 0.86 (1) | 2.25 (1) | 3.104 (3) | 169 (2) |
| Symmetry codes: (i) x, y, z+1; (ii) −x+1/2, y+1/2, −z+1. |
The authors thank the Higher Education Commission of Pakistan and the
University of Malaya for supporting this study.
Barbour, L. J. (2001). J. Supramol. Chem. 1, 189–191.
Bruker (2009). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA.
Pérez, S. & Brisse, F. (1977). Acta Cryst. B33, 3259–3262.
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122.
Westrip, S. P. (2010). J. Appl. Cryst. 43, 920–925.
The chemical is a commercially available chemical that should be compable of condensing with carbonyl compounds to yield Schff bases; its special feature is its trimethylene portion, which assumes a V shape. The C17H18N2O4 molecule (Scheme I) lies on a twofold rotation axis that passes through the central methylene carbon atom; this symmetry element relates one 4-aminobenzoate unit to the other. The molecule assumes a V shape and the trimethylene portion assumes a gauche–gauche conformation. The amino nitrogen atom shows non-planar coordination (Fig. 1). Adjacent molecules are connected by N–H···O and N–H···N shydrogen bonds to form a three-dimensional network.