supplementary materials

Bis[8-ethyl-5-oxo-2-(piperazin-4-ium-1-yl)-5,8-dihydropyrido[2,3-d]pyrimidine-6-carboxylic acid] 2,5-dicarboxybenzene-1,4-dicarboxylate octahydrate
The asymmetric unit of the title compound, 2C14H18N5O3+·C10H5O82-·8H2O, contains one [H2ppa]+cation, one half of an [H2btec]2- anion (H4btec = 1,2,4,5-benzenetetracarboxylic acid and Hppa = 8-ethyl-5-oxo-2-piperazin-1-yl-5,8-dihydropyrido[2,3-d]pyrimidine-6-carboxylic acid) that is completed by inversion symmetry and four water molecules. In the crystal, the molecules are connected by intermolecular hydrogen-bonding interactions and
-
stacking between the benzene rings of the [H2btec]2- anion and the pyrimidine rings of the [H2ppa]+ cation [centroid-centroid distance = 3.597 (3) Å], generating a three-dimensional supramolecular structure.
A mixture of AgNO3 (0.085 g, 0.5 mmol), Hppa (0.089 g, 0.25 mmol), H4btec
(0.064 g, 0.25 mmol) and distilled water (8 ml) was stirred for 20 min. in
air. The mixture was then transferred to a 18 ml Teflon-lined hydrothermal
bomb. The bomb was kept at 393 K for 96 h under autogenous pressure. Upon
cooling, colorless blocks of 1 were obtained from the reaction mixture.
The H atoms bonded to C atoms were positioned geometrically and refined using a
riding model approximation [aromatic C—H = 0.93 Å, aliphatic C—H =0.96
—0.97 Å], with Uiso(H) = 1.2—1.5 Ueq(C).The H on N atoms
were located in difference Fourier maps, and refined with distances restraint
of N—H = 0.90 Å, and with Uiso(H)= 1.2 Ueq(N). The H
atoms bonded to O atoms were located in difference Fourier maps and refined
with Uiso(H) = 1.3 Ueq(O) for carboxyl groups of
[C14H18O3N5]+and [C10H4O8]2-respectively. The O—H
bonds are 0.986 Å and 0.924 Å in carboxyl groups of
[C14H18O3N5]+ and [C10H4O8]2-. The H atoms bonded
to OW atoms were located in a difference Fourier maps and refined with OW—H
=0.812 Å—0.878 Å and Uiso(H) = 1.1—1.5 Ueq(OW).
Data collection: SMART (Bruker, 2001); cell refinement: SAINT (Bruker, 2001); data reduction: SAINT (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL-Plus (Sheldrick, 2008); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).
Bis[8-ethyl-5-oxo-2-(piperazin-4-ium-1-yl)-5,8-dihydropyrido[2,3-
d]pyrimidine-6-carboxylic acid]
2,5-dicarboxybenzene-1,4-dicarboxylate octahydrate
top
Crystal data top
| C14H18N5O3+·0.5C10H4O8−·4H2O | Z = 2 |
| Mr = 502.46 | F(000) = 530 |
| Triclinic, P1 | Dx = 1.465 Mg m−3 |
| Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
| a = 8.8336 (16) Å | Cell parameters from 10252 reflections |
| b = 11.103 (2) Å | θ = 2.5–27.4° |
| c = 12.445 (2) Å | µ = 0.12 mm−1 |
| α = 83.010 (2)° | T = 296 K |
| β = 76.737 (2)° | Block, colourless |
| γ = 73.831 (2)° | 0.52 × 0.48 × 0.39 mm |
| V = 1138.9 (4) Å3 | |
Data collection top
Bruker APEX CCD area-detector diffractometer | 5071 independent reflections |
| Radiation source: fine-focus sealed tube | 3550 reflections with I > 2σ(I) |
| graphite | Rint = 0.021 |
| phi and ω scans | θmax = 27.4°, θmin = 2.5° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −11→11 |
| Tmin = 0.940, Tmax = 0.954 | k = −14→14 |
| 10252 measured reflections | l = −16→16 |
Refinement top
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.046 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.160 | H atoms treated by a mixture of independent and constrained refinement |
| S = 1.01 | w = 1/[σ2(Fo2) + (0.1P)2] where P = (Fo2 + 2Fc2)/3 |
| 5071 reflections | (Δ/σ)max < 0.001 |
| 352 parameters | Δρmax = 0.33 e Å−3 |
| 14 restraints | Δρmin = −0.20 e Å−3 |
Crystal data top
| C14H18N5O3+·0.5C10H4O8−·4H2O | γ = 73.831 (2)° |
| Mr = 502.46 | V = 1138.9 (4) Å3 |
| Triclinic, P1 | Z = 2 |
| a = 8.8336 (16) Å | Mo Kα radiation |
| b = 11.103 (2) Å | µ = 0.12 mm−1 |
| c = 12.445 (2) Å | T = 296 K |
| α = 83.010 (2)° | 0.52 × 0.48 × 0.39 mm |
| β = 76.737 (2)° | |
Data collection top
Bruker APEX CCD area-detector diffractometer | 5071 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 3550 reflections with I > 2σ(I) |
| Tmin = 0.940, Tmax = 0.954 | Rint = 0.021 |
| 10252 measured reflections | θmax = 27.4° |
Refinement top
| R[F2 > 2σ(F2)] = 0.046 | H atoms treated by a mixture of independent and constrained refinement |
| wR(F2) = 0.160 | Δρmax = 0.33 e Å−3 |
| S = 1.01 | Δρmin = −0.20 e Å−3 |
| 5071 reflections | Absolute structure: ? |
| 352 parameters | Flack parameter: ? |
| 14 restraints | Rogers parameter: ? |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top| | x | y | z | Uiso*/Ueq | |
| C1 | −0.2298 (2) | 0.58949 (18) | 0.76095 (14) | 0.0453 (4) | |
| C2 | −0.1629 (2) | 0.63420 (16) | 0.64826 (13) | 0.0362 (4) | |
| C3 | 0.0071 (2) | 0.60173 (15) | 0.60569 (13) | 0.0348 (4) | |
| C4 | 0.05712 (18) | 0.65003 (14) | 0.49440 (12) | 0.0316 (3) | |
| C5 | 0.2186 (2) | 0.62709 (16) | 0.43913 (13) | 0.0377 (4) | |
| H5A | 0.2968 | 0.5782 | 0.4765 | 0.045* | |
| C6 | 0.14597 (19) | 0.74223 (16) | 0.28730 (13) | 0.0336 (4) | |
| C7 | −0.05440 (18) | 0.72426 (14) | 0.43356 (12) | 0.0295 (3) | |
| C8 | −0.2657 (2) | 0.70738 (16) | 0.58476 (13) | 0.0360 (4) | |
| H8A | −0.3755 | 0.7269 | 0.6149 | 0.043* | |
| C9 | −0.33740 (19) | 0.83037 (17) | 0.41760 (14) | 0.0402 (4) | |
| H9A | −0.2943 | 0.8957 | 0.3727 | 0.048* | |
| H9B | −0.4340 | 0.8707 | 0.4687 | 0.048* | |
| C10 | −0.3799 (3) | 0.7527 (2) | 0.3443 (2) | 0.0640 (6) | |
| H10A | −0.4572 | 0.8056 | 0.3042 | 0.096* | |
| H10B | −0.4251 | 0.6892 | 0.3887 | 0.096* | |
| H10C | −0.2847 | 0.7134 | 0.2931 | 0.096* | |
| C11 | 0.0817 (2) | 0.85693 (19) | 0.11400 (14) | 0.0470 (4) | |
| H11A | 0.1022 | 0.9380 | 0.0881 | 0.056* | |
| H11B | −0.0279 | 0.8712 | 0.1564 | 0.056* | |
| C12 | 0.1010 (2) | 0.78182 (19) | 0.01646 (14) | 0.0472 (5) | |
| H12A | 0.0685 | 0.7049 | 0.0421 | 0.057* | |
| H12B | 0.0317 | 0.8298 | −0.0325 | 0.057* | |
| C13 | 0.3844 (2) | 0.68542 (19) | 0.02854 (14) | 0.0475 (5) | |
| H13A | 0.4945 | 0.6720 | −0.0128 | 0.057* | |
| H13B | 0.3654 | 0.6040 | 0.0552 | 0.057* | |
| C14 | 0.3613 (2) | 0.7624 (2) | 0.12515 (15) | 0.0474 (5) | |
| H14A | 0.4303 | 0.7166 | 0.1751 | 0.057* | |
| H14B | 0.3910 | 0.8403 | 0.0992 | 0.057* | |
| C15 | 0.0728 (2) | 0.91872 (15) | 0.58174 (12) | 0.0335 (4) | |
| C16 | 0.1614 (2) | 0.95494 (15) | 0.48134 (14) | 0.0350 (4) | |
| H16 | 0.271 (2) | 0.9248 (16) | 0.4737 (15) | 0.037 (5)* | |
| C17 | 0.09561 (19) | 1.03470 (15) | 0.39901 (12) | 0.0327 (4) | |
| C18 | 0.2204 (2) | 1.06072 (16) | 0.29829 (14) | 0.0419 (4) | |
| C19 | 0.1758 (2) | 0.82880 (18) | 0.65566 (15) | 0.0459 (4) | |
| N1 | 0.27157 (18) | 0.75043 (15) | −0.04528 (11) | 0.0452 (4) | |
| H1A | 0.2821 | 0.7007 | −0.0999 | 0.054* | |
| H1B | 0.2974 | 0.8215 | −0.0764 | 0.054* | |
| N2 | 0.19315 (17) | 0.79002 (15) | 0.18387 (11) | 0.0430 (4) | |
| N3 | 0.26607 (16) | 0.67052 (14) | 0.33790 (11) | 0.0396 (3) | |
| N4 | −0.01218 (15) | 0.77067 (13) | 0.33069 (10) | 0.0338 (3) | |
| N5 | −0.21691 (15) | 0.75273 (13) | 0.48113 (11) | 0.0333 (3) | |
| O1 | −0.37365 (18) | 0.61061 (16) | 0.80048 (11) | 0.0640 (4) | |
| OW1 | 0.34139 (19) | 0.54945 (15) | 0.80171 (12) | 0.0614 (4) | |
| HW1A | 0.4401 (19) | 0.557 (2) | 0.7779 (18) | 0.072* | |
| HW1B | 0.298 (2) | 0.581 (2) | 0.7463 (16) | 0.070* | |
| O2 | −0.12330 (19) | 0.52214 (15) | 0.81832 (12) | 0.0622 (4) | |
| H2A | −0.018 (2) | 0.516 (2) | 0.7683 (19) | 0.083 (8)* | |
| OW2 | 0.3559 (2) | 0.95983 (17) | 0.85270 (14) | 0.0721 (5) | |
| HW2A | 0.442 (3) | 0.954 (3) | 0.8054 (18) | 0.097* | |
| HW2B | 0.353 (3) | 1.013 (2) | 0.8988 (19) | 0.103* | |
| O3 | 0.10748 (15) | 0.53510 (12) | 0.66146 (10) | 0.0502 (3) | |
| OW3 | 0.8262 (3) | 0.59914 (18) | 0.05037 (17) | 0.0835 (5) | |
| HW3A | 0.764 (3) | 0.562 (3) | 0.0954 (17) | 0.092* | |
| HW3B | 0.840 (4) | 0.570 (3) | −0.0121 (15) | 0.118* | |
| OW4 | 0.6900 (2) | 0.85376 (17) | 0.01290 (14) | 0.0782 (5) | |
| HW4A | 0.713 (4) | 0.876 (2) | −0.0572 (15) | 0.107* | |
| HW4B | 0.725 (3) | 0.7783 (16) | 0.022 (2) | 0.092* | |
| O4 | 0.17347 (18) | 1.10598 (16) | 0.20881 (11) | 0.0655 (4) | |
| O5 | 0.36177 (16) | 1.03613 (14) | 0.30721 (12) | 0.0604 (4) | |
| O6 | 0.1120 (2) | 0.80744 (16) | 0.75738 (11) | 0.0660 (4) | |
| H6A | 0.002 (2) | 0.842 (2) | 0.772 (2) | 0.084 (8)* | |
| O7 | 0.31545 (18) | 0.77853 (16) | 0.61765 (13) | 0.0728 (5) | |
Atomic displacement parameters (Å2) top| | U11 | U22 | U33 | U12 | U13 | U23 |
| C1 | 0.0499 (11) | 0.0524 (11) | 0.0330 (9) | −0.0199 (9) | −0.0005 (8) | −0.0002 (8) |
| C2 | 0.0399 (9) | 0.0389 (9) | 0.0298 (8) | −0.0142 (7) | −0.0017 (7) | −0.0034 (7) |
| C3 | 0.0377 (9) | 0.0347 (8) | 0.0327 (8) | −0.0095 (7) | −0.0074 (7) | −0.0035 (6) |
| C4 | 0.0312 (8) | 0.0334 (8) | 0.0311 (8) | −0.0097 (6) | −0.0052 (6) | −0.0039 (6) |
| C5 | 0.0305 (8) | 0.0460 (10) | 0.0352 (9) | −0.0059 (7) | −0.0080 (7) | −0.0036 (7) |
| C6 | 0.0310 (8) | 0.0433 (9) | 0.0284 (8) | −0.0123 (7) | −0.0040 (6) | −0.0072 (7) |
| C7 | 0.0283 (8) | 0.0337 (8) | 0.0280 (7) | −0.0097 (6) | −0.0042 (6) | −0.0068 (6) |
| C8 | 0.0308 (8) | 0.0441 (10) | 0.0324 (8) | −0.0124 (7) | 0.0007 (6) | −0.0076 (7) |
| C9 | 0.0274 (8) | 0.0474 (10) | 0.0416 (9) | −0.0031 (7) | −0.0069 (7) | −0.0030 (7) |
| C10 | 0.0566 (13) | 0.0637 (13) | 0.0801 (15) | −0.0067 (10) | −0.0388 (12) | −0.0093 (11) |
| C11 | 0.0415 (10) | 0.0579 (11) | 0.0347 (9) | −0.0089 (8) | −0.0026 (7) | 0.0040 (8) |
| C12 | 0.0452 (10) | 0.0649 (12) | 0.0352 (9) | −0.0233 (9) | −0.0109 (8) | 0.0091 (8) |
| C13 | 0.0413 (10) | 0.0584 (12) | 0.0375 (10) | −0.0115 (9) | −0.0004 (8) | −0.0009 (8) |
| C14 | 0.0329 (9) | 0.0750 (13) | 0.0337 (9) | −0.0191 (9) | 0.0004 (7) | −0.0023 (8) |
| C15 | 0.0365 (9) | 0.0342 (8) | 0.0304 (8) | −0.0091 (7) | −0.0076 (6) | −0.0026 (6) |
| C16 | 0.0298 (8) | 0.0377 (9) | 0.0365 (9) | −0.0083 (7) | −0.0045 (7) | −0.0047 (7) |
| C17 | 0.0368 (9) | 0.0324 (8) | 0.0288 (8) | −0.0115 (7) | −0.0022 (6) | −0.0045 (6) |
| C18 | 0.0458 (10) | 0.0395 (9) | 0.0358 (9) | −0.0133 (8) | 0.0042 (7) | −0.0034 (7) |
| C19 | 0.0483 (11) | 0.0515 (11) | 0.0385 (10) | −0.0105 (9) | −0.0161 (8) | 0.0025 (8) |
| N1 | 0.0549 (9) | 0.0520 (9) | 0.0302 (7) | −0.0205 (7) | −0.0041 (6) | −0.0018 (6) |
| N2 | 0.0332 (8) | 0.0654 (10) | 0.0276 (7) | −0.0139 (7) | −0.0012 (6) | 0.0003 (7) |
| N3 | 0.0296 (7) | 0.0550 (9) | 0.0329 (7) | −0.0097 (6) | −0.0051 (6) | −0.0026 (6) |
| N4 | 0.0301 (7) | 0.0423 (8) | 0.0284 (7) | −0.0104 (6) | −0.0035 (5) | −0.0029 (6) |
| N5 | 0.0282 (7) | 0.0410 (8) | 0.0296 (7) | −0.0082 (6) | −0.0036 (5) | −0.0040 (5) |
| O1 | 0.0535 (9) | 0.0927 (11) | 0.0404 (7) | −0.0267 (8) | 0.0077 (6) | 0.0014 (7) |
| OW1 | 0.0568 (9) | 0.0730 (10) | 0.0537 (9) | −0.0144 (8) | −0.0185 (7) | 0.0068 (7) |
| O2 | 0.0631 (10) | 0.0786 (10) | 0.0395 (7) | −0.0200 (8) | −0.0073 (7) | 0.0145 (7) |
| OW2 | 0.0719 (11) | 0.0748 (11) | 0.0624 (10) | −0.0340 (9) | 0.0177 (8) | −0.0015 (8) |
| O3 | 0.0469 (8) | 0.0571 (8) | 0.0416 (7) | −0.0086 (6) | −0.0123 (6) | 0.0107 (6) |
| OW3 | 0.0943 (14) | 0.0840 (13) | 0.0773 (12) | −0.0392 (11) | −0.0119 (11) | 0.0024 (10) |
| OW4 | 0.0926 (13) | 0.0772 (11) | 0.0517 (9) | −0.0234 (10) | 0.0125 (9) | −0.0031 (9) |
| O4 | 0.0650 (10) | 0.0936 (12) | 0.0312 (7) | −0.0228 (8) | −0.0001 (6) | 0.0087 (7) |
| O5 | 0.0412 (8) | 0.0692 (9) | 0.0569 (8) | −0.0126 (7) | 0.0083 (6) | 0.0090 (7) |
| O6 | 0.0667 (10) | 0.0878 (11) | 0.0363 (7) | −0.0113 (9) | −0.0163 (7) | 0.0145 (7) |
| O7 | 0.0492 (9) | 0.0929 (12) | 0.0579 (9) | 0.0087 (8) | −0.0165 (7) | 0.0124 (8) |
Geometric parameters (Å, °) top
| C1—O1 | 1.219 (2) | C12—H12B | 0.9700 |
| C1—O2 | 1.320 (2) | C13—N1 | 1.489 (2) |
| C1—C2 | 1.475 (2) | C13—C14 | 1.503 (3) |
| C2—C8 | 1.368 (2) | C13—H13A | 0.9700 |
| C2—C3 | 1.430 (2) | C13—H13B | 0.9700 |
| C3—O3 | 1.268 (2) | C14—N2 | 1.462 (2) |
| C3—C4 | 1.439 (2) | C14—H14A | 0.9700 |
| C4—C7 | 1.400 (2) | C14—H14B | 0.9700 |
| C4—C5 | 1.401 (2) | C15—C16 | 1.393 (2) |
| C5—N3 | 1.311 (2) | C15—C17i | 1.406 (2) |
| C5—H5A | 0.9300 | C15—C19 | 1.525 (2) |
| C6—N4 | 1.339 (2) | C16—C17 | 1.392 (2) |
| C6—N2 | 1.350 (2) | C16—H16 | 0.917 (19) |
| C6—N3 | 1.367 (2) | C17—C15i | 1.406 (2) |
| C7—N4 | 1.3307 (19) | C17—C18 | 1.525 (2) |
| C7—N5 | 1.3834 (19) | C18—O5 | 1.230 (2) |
| C8—N5 | 1.345 (2) | C18—O4 | 1.275 (2) |
| C8—H8A | 0.9300 | C19—O7 | 1.213 (2) |
| C9—N5 | 1.487 (2) | C19—O6 | 1.285 (2) |
| C9—C10 | 1.499 (3) | N1—H1A | 0.9000 |
| C9—H9A | 0.9700 | N1—H1B | 0.9000 |
| C9—H9B | 0.9700 | OW1—HW1A | 0.878 (15) |
| C10—H10A | 0.9600 | OW1—HW1B | 0.854 (15) |
| C10—H10B | 0.9600 | O2—H2A | 0.986 (16) |
| C10—H10C | 0.9600 | OW2—HW2A | 0.842 (16) |
| C11—N2 | 1.451 (2) | OW2—HW2B | 0.860 (16) |
| C11—C12 | 1.507 (3) | OW3—HW3A | 0.849 (16) |
| C11—H11A | 0.9700 | OW3—HW3B | 0.850 (17) |
| C11—H11B | 0.9700 | OW4—HW4A | 0.871 (16) |
| C12—N1 | 1.491 (2) | OW4—HW4B | 0.812 (16) |
| C12—H12A | 0.9700 | O6—H6A | 0.924 (17) |
| | | |
| O1—C1—O2 | 120.65 (17) | N1—C13—C14 | 110.52 (15) |
| O1—C1—C2 | 123.66 (18) | N1—C13—H13A | 109.5 |
| O2—C1—C2 | 115.69 (16) | C14—C13—H13A | 109.5 |
| C8—C2—C3 | 120.28 (14) | N1—C13—H13B | 109.5 |
| C8—C2—C1 | 119.08 (16) | C14—C13—H13B | 109.5 |
| C3—C2—C1 | 120.64 (15) | H13A—C13—H13B | 108.1 |
| O3—C3—C2 | 122.75 (15) | N2—C14—C13 | 109.98 (14) |
| O3—C3—C4 | 121.96 (15) | N2—C14—H14A | 109.7 |
| C2—C3—C4 | 115.29 (14) | C13—C14—H14A | 109.7 |
| C7—C4—C5 | 115.19 (14) | N2—C14—H14B | 109.7 |
| C7—C4—C3 | 121.64 (14) | C13—C14—H14B | 109.7 |
| C5—C4—C3 | 123.17 (15) | H14A—C14—H14B | 108.2 |
| N3—C5—C4 | 123.88 (15) | C16—C15—C17i | 117.61 (15) |
| N3—C5—H5A | 118.1 | C16—C15—C19 | 113.70 (15) |
| C4—C5—H5A | 118.1 | C17i—C15—C19 | 128.68 (15) |
| N4—C6—N2 | 117.33 (15) | C17—C16—C15 | 124.81 (15) |
| N4—C6—N3 | 126.49 (14) | C17—C16—H16 | 120.7 (11) |
| N2—C6—N3 | 116.17 (14) | C15—C16—H16 | 114.4 (11) |
| N4—C7—N5 | 117.27 (13) | C16—C17—C15i | 117.58 (14) |
| N4—C7—C4 | 123.16 (14) | C16—C17—C18 | 113.93 (15) |
| N5—C7—C4 | 119.57 (14) | C15i—C17—C18 | 128.49 (15) |
| N5—C8—C2 | 123.73 (15) | O5—C18—O4 | 123.21 (16) |
| N5—C8—H8A | 118.1 | O5—C18—C17 | 118.33 (16) |
| C2—C8—H8A | 118.1 | O4—C18—C17 | 118.46 (16) |
| N5—C9—C10 | 111.63 (15) | O7—C19—O6 | 121.26 (18) |
| N5—C9—H9A | 109.3 | O7—C19—C15 | 119.71 (17) |
| C10—C9—H9A | 109.3 | O6—C19—C15 | 119.03 (17) |
| N5—C9—H9B | 109.3 | C13—N1—C12 | 111.63 (13) |
| C10—C9—H9B | 109.3 | C13—N1—H1A | 109.3 |
| H9A—C9—H9B | 108.0 | C12—N1—H1A | 109.3 |
| C9—C10—H10A | 109.5 | C13—N1—H1B | 109.3 |
| C9—C10—H10B | 109.5 | C12—N1—H1B | 109.3 |
| H10A—C10—H10B | 109.5 | H1A—N1—H1B | 108.0 |
| C9—C10—H10C | 109.5 | C6—N2—C11 | 123.41 (14) |
| H10A—C10—H10C | 109.5 | C6—N2—C14 | 122.94 (15) |
| H10B—C10—H10C | 109.5 | C11—N2—C14 | 112.99 (13) |
| N2—C11—C12 | 110.08 (15) | C5—N3—C6 | 115.45 (14) |
| N2—C11—H11A | 109.6 | C7—N4—C6 | 115.83 (14) |
| C12—C11—H11A | 109.6 | C8—N5—C7 | 119.48 (14) |
| N2—C11—H11B | 109.6 | C8—N5—C9 | 120.08 (13) |
| C12—C11—H11B | 109.6 | C7—N5—C9 | 120.43 (13) |
| H11A—C11—H11B | 108.2 | HW1A—OW1—HW1B | 101.7 (17) |
| N1—C12—C11 | 110.68 (14) | C1—O2—H2A | 105.2 (15) |
| N1—C12—H12A | 109.5 | HW2A—OW2—HW2B | 107 (2) |
| C11—C12—H12A | 109.5 | HW3A—OW3—HW3B | 106 (2) |
| N1—C12—H12B | 109.5 | HW4A—OW4—HW4B | 109 (2) |
| C11—C12—H12B | 109.5 | C19—O6—H6A | 111.5 (16) |
| H12A—C12—H12B | 108.1 | | |
| Symmetry codes: (i) −x, −y+2, −z+1. |
Hydrogen-bond geometry (Å, °) top
| D—H···A | D—H | H···A | D···A | D—H···A |
| O6—H6A···O4i | 0.92 (2) | 1.47 (2) | 2.392 (2) | 178 (3) |
| N1—H1A···OW1ii | 0.90 | 2.08 | 2.952 (2) | 164 |
| N1—H1A···O6ii | 0.90 | 2.56 | 3.022 (2) | 113 |
| N1—H1B···OW2ii | 0.90 | 1.82 | 2.717 (2) | 176 |
| OW1—HW1A···O1iii | 0.88 (2) | 1.98 (2) | 2.780 (2) | 150 (2) |
| OW1—HW1B···O3 | 0.85 (2) | 2.38 (2) | 3.041 (2) | 135 (2) |
| OW1—HW1B···O7 | 0.85 (2) | 2.57 (2) | 3.204 (2) | 132 (2) |
| OW1—HW1B···O6 | 0.85 (2) | 2.59 (2) | 3.084 (2) | 118 (2) |
| O2—H2A···O3 | 0.99 (2) | 1.56 (2) | 2.5013 (19) | 159 (2) |
| OW2—HW2B···OW4iv | 0.86 (2) | 1.86 (2) | 2.703 (3) | 168 (3) |
| OW2—HW2A···O5iv | 0.84 (2) | 1.98 (2) | 2.819 (2) | 173 (3) |
| OW3—HW3A···OW1v | 0.85 (2) | 1.93 (2) | 2.770 (2) | 169 (3) |
| OW3—HW3B···O2vi | 0.85 (2) | 2.17 (2) | 3.011 (3) | 172 (3) |
| OW4—HW4A···O4vii | 0.87 (2) | 1.94 (2) | 2.782 (2) | 163 (3) |
| OW4—HW4B···OW3 | 0.81 (2) | 1.97 (2) | 2.775 (3) | 174 (3) |
| Symmetry codes: (i) −x, −y+2, −z+1; (ii) x, y, z−1; (iii) x+1, y, z; (iv) −x+1, −y+2, −z+1; (v) −x+1, −y+1, −z+1; (vi) x+1, y, z−1; (vii) −x+1, −y+2, −z. |
Table 1
Hydrogen-bond geometry (Å, °) top
| D—H···A | D—H | H···A | D···A | D—H···A |
| O6—H6A···O4i | 0.92 (2) | 1.47 (2) | 2.392 (2) | 178 (3) |
| N1—H1A···OW1ii | 0.90 | 2.08 | 2.952 (2) | 164 |
| N1—H1A···O6ii | 0.90 | 2.56 | 3.022 (2) | 113 |
| N1—H1B···OW2ii | 0.90 | 1.82 | 2.717 (2) | 176 |
| OW1—HW1A···O1iii | 0.88 (2) | 1.98 (2) | 2.780 (2) | 150 (2) |
| OW1—HW1B···O3 | 0.85 (2) | 2.38 (2) | 3.041 (2) | 135 (2) |
| OW1—HW1B···O7 | 0.85 (2) | 2.57 (2) | 3.204 (2) | 132 (2) |
| OW1—HW1B···O6 | 0.85 (2) | 2.59 (2) | 3.084 (2) | 118 (2) |
| O2—H2A···O3 | 0.99 (2) | 1.56 (2) | 2.5013 (19) | 159 (2) |
| OW2—HW2B···OW4iv | 0.86 (2) | 1.86 (2) | 2.703 (3) | 168 (3) |
| OW2—HW2A···O5iv | 0.84 (2) | 1.98 (2) | 2.819 (2) | 173 (3) |
| OW3—HW3A···OW1v | 0.85 (2) | 1.93 (2) | 2.770 (2) | 169 (3) |
| OW3—HW3B···O2vi | 0.85 (2) | 2.17 (2) | 3.011 (3) | 172 (3) |
| OW4—HW4A···O4vii | 0.87 (2) | 1.94 (2) | 2.782 (2) | 163 (3) |
| OW4—HW4B···OW3 | 0.81 (2) | 1.97 (2) | 2.775 (3) | 174 (3) |
| Symmetry codes: (i) −x, −y+2, −z+1; (ii) x, y, z−1; (iii) x+1, y, z; (iv) −x+1, −y+2, −z+1; (v) −x+1, −y+1, −z+1; (vi) x+1, y, z−1; (vii) −x+1, −y+2, −z. |
This work was supported by the Science and Technology Foundation of Southwest
University (SWUB2007035).
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Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany.
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Pipemidic acid (8-ethyl-5-oxo-2-piperazin-1-yl-5,8-dihydropyrido[2,3-d]pyrimidine-6- carboxylic acid) is member of quinolones used to treat infections (Mizuki et al., 1996). The complexes of the Hppa and H4btec have not been reported till now. In this paper, the structure of the title compound, 1, is described (Fig. 1). The asymmetric unit contains one [H2ppa]+cation, one half of [H2btec]2- anion that is completed by inversion symmetry, and four lattice water molecules. The molecules are linked by intermolecular N—H···O and O—H···O hydrogen-bonding interactions (N···O = 2.717 (2)–3.022 (2) Å, O···O = 2.392 (2)–3.204 (2) Å) and π—π stacking between the benzene rings of [H2btec]2- anion and the pyrimidine rings of [H2ppa]+cation (centroid distance of 3.597 (3) Å) to form a three-dimensional supramolecular structure.