organic compounds\(\def\hfill{\hskip 5em}\def\hfil{\hskip 3em}\def\eqno#1{\hfil {#1}}\)

Journal logoCRYSTALLOGRAPHIC
COMMUNICATIONS
ISSN: 2056-9890

2-Methyl-3-{2-nitro-1-[2-(prop-2-yn-1-yl­­oxy)phen­yl]eth­yl}-1H-indole

aDepartment of Physics, RKM Vivekananda College (Autonomous), Chennai 600 004, India, and bOrganic Chemistry Division, Central Leather Research Institute, Adyar, Chennai 600 020, India
*Correspondence e-mail: ksethusankar@yahoo.co.in

(Received 8 August 2011; accepted 12 September 2011; online 17 September 2011)

In the title compound, C20H18N2O3, the indole unit is essentially planar, with a maximum deviation of 0.0197 (18) Å for the N atom and forms a dihedral angle of 78.09 (9)° with the propyne-subsituted phenyl ring. The propyne group is almost linear, the C—C≡C angle being 176.5 (2)°, and is also in the flagpole position on the O atom. In the crystal, mol­ecules are linked via N—H⋯O and C—H⋯O inter­molecular hydrogen bonds involving the nitro-group O atoms as acceptors.

Related literature

For general backround to indoles, see: Gribble (1996[Gribble, G. W. (1996). Comprehensive Heterocyclic Chemistry, 2nd ed., Vol. 2, pp. 207-257. New York: Pergamon Press.]); Mathiesen et al. (2005[Mathiesen, J. M., Ulven, T., Martini, L., Gerlach, L. O., Heinemann, A. & Kostenis, E. (2005). Mol. Pharmacol. 68, 393-402.]). For related structures, see: Narayanan et al. (2011[Narayanan, P., Sethusankar, K., Ramachandiran, K. & Perumal, P. T. (2011). Acta Cryst. E67, o517.]); Ranjith et al. (2010[Ranjith, S., Thirunarayanan, A., Raja, S., Rajakumar, P. & SubbiahPandi, A. (2010). Acta Cryst. E66, o2261-o2262.]). For bond-length distortions, see: Allen (1981[Allen, F. H. (1981). Acta Cryst. B37, 900-906.]).

[Scheme 1]

Experimental

Crystal data
  • C20H18N2O3

  • Mr = 334.36

  • Tetragonal, I 41 /a

  • a = 23.3474 (7) Å

  • c = 12.8536 (7) Å

  • V = 7006.5 (5) Å3

  • Z = 16

  • Mo Kα radiation

  • μ = 0.09 mm−1

  • T = 295 K

  • 0.30 × 0.25 × 0.20 mm

Data collection
  • Bruker Kappa APEXII diffractometer

  • 31091 measured reflections

  • 3954 independent reflections

  • 2629 reflections with I > 2σ(I)

  • Rint = 0.034

Refinement
  • R[F2 > 2σ(F2)] = 0.049

  • wR(F2) = 0.149

  • S = 1.03

  • 3954 reflections

  • 231 parameters

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.35 e Å−3

  • Δρmin = −0.30 e Å−3

Table 1
Hydrogen-bond geometry (Å, °)

D—H⋯A D—H H⋯A DA D—H⋯A
N1—H1A⋯O2i 0.86 2.14 2.997 (2) 173
C11—H11A⋯O1ii 0.97 2.52 3.433 (3) 157
C15—H15⋯O1iii 0.93 2.57 3.315 (3) 137
Symmetry codes: (i) [-y+{\script{3\over 4}}, x-{\script{1\over 4}}, -z+{\script{3\over 4}}]; (ii) [-y+{\script{5\over 4}}, x-{\script{1\over 4}}, z-{\script{1\over 4}}]; (iii) [y+{\script{1\over 4}}, -x+{\script{5\over 4}}, z-{\script{3\over 4}}].

Data collection: APEX2 (Bruker, 2008[Bruker (2008). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA.]); cell refinement: SAINT (Bruker, 2008[Bruker (2008). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA.]); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]); molecular graphics: ORTEP-3 (Farrugia, 1997[Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.]) and Mercury (Macrae et al., 2008[Macrae, C. F., Bruno, I. J., Chisholm, J. A., Edgington, P. R., McCabe, P., Pidcock, E., Rodriguez-Monge, L., Taylor, R., van de Streek, J. & Wood, P. A. (2008). J. Appl. Cryst. 41, 466-470.]); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009[Spek, A. L. (2009). Acta Cryst. D65, 148-155.]).

Supporting information


Comment top

Indole is a common motif for drug target and as such, of new diversity–tolerant routes to this previleged biological scaffold continues to be of significant benefit (Gribble, 1996) and forms the basis of a wide variety of drugs, including the anti–inflammatory agent indomethacin, reserpine and sumatriptan. Indole derivatives are identified as interfering with a G protein–independent signalling pathway of the CRTH2 receptor (Mathiesen et al., 2005). As a part of our studies, we report herein the crystal structure of the title compound, which comprises the bicycle indole moiety, propyne subsituted phenyl ring and nitro methane group, as illustrated in (Fig. 1).

In the title compound, C20H18N2O3, the indole bicycle moiety (C1–C8/N1) is essentially planar with a maximum deviation of -0.0197 (18)Å for N1 atom. The indole moiety (C1–C8/N1) forms a dihedral angle of 78.09 (9)° with the propyne subsituted phenyl ring (C12–C17). In the indole ring system, the dihedral angle between the pyrrole ring (C5–C8/N1) and benzene ring (C1–C6) is 1.17 (10)°.

In the indole moiety, the endocyclic angles at C4 and C6 are contracted to 117.5 (2)° and 118.0 (17)°, respectively, while those at C2, C3 and C5 are expanded to 121.5 (2)°, 121.6 (3)° and 121.2 (3)°, respectively. This would appear to be a real effect caused by the fusion of the smaller pyrrole ring to the six–membered benzene ring, and the strain is taken up by the angular distortion rather than by bond–length distortions (Allen, 1981).

The angles around atom C10: [C7—C10—C12 = 113.88 (13)°, C7—C10—C11 = 110.41 (14)° and C12—C10—C11 = 109.95 (14)°] deviates significantly from ideal tetrahedral values which may be as a result of steric interactions between indole, nitromethane and propyne subsituted phenyl ring. The deviation of atom C10 from the indole moiety is -0.1066 (16)Å. The deviations of atom O3 from the phenyl ring (C12–C17) and propyne group (O3/C18/C19/C20) are 0.0504 (14)Å and 0.3088 (14)Å, respectively.

The oxygen subsituted propyne group is slightly twisted from the phenyl ring (C12–C17) which it is attached as evindenced by the torsion angle C16–C17–O3–C18 = 7.2 (3)°. The propyne group is almost linear, C18–C19C20 angle being 176.5 (2)°, and is also in the flagpole position on O3 atom. The title compound exhibits structural similarities with the already reported related structures (Narayanan et al., 2011; Ranjith et al., 2010).

In the crystal packing, molecules are linked via N—H···O and bifurcated C—H···O intermolecular hydrogen bonds involving the nitro group O atoms as acceptors (Table 1). The symmetry codes are: (i) -y+3/4, x-1/4, -z+3/4; (ii) -y+5/4, x-1/4, z-1/4; (iii) y+1/4, -x+5/4, z-3/4. The packing view of the title compound is shown in (Fig. 2).

Related literature top

For general backround to indoles, see: Gribble (1996); Mathiesen et al. (2005). For related structures, see: Narayanan et al. (2011); Ranjith et al. (2010). For bond-length distortions, see: Allen (1981).

Experimental top

To the nitroalkene (1.74 mmol) in water (10 ml) was added KHSO4 (30 mol%) and the mixture was stirred for 5 minutes. 1–Ethyl–indole (1.74 mmol) was added to the mixture and the stirring was continued following the progress of the reaction by TLC. After completion of the reaction, the reaction mixture was extracted with ethyl acetate (3× 10 ml), dried over anhydrous sodium sulfate, filtered, concentrated under reduced pressure and the residue was column chromatographed over silica gel using EtOAc : Petroleum ether (1.5 : 8.5) as eluent to get the pure product.

Refinement top

The hydrogen atoms were placed in calculated positions with C—H = 0.89Å to 0.98Å, N—H = 0.86Å and refined in the riding model with fixed isotropic displacement parameters: Uiso(H) = 1.5Ueq(C)for methyl group and Uiso(H) = 1.2Ueq(C, N) for other groups.

In the crystal, solvent accessible void 42Å3 is found.

Structure description top

Indole is a common motif for drug target and as such, of new diversity–tolerant routes to this previleged biological scaffold continues to be of significant benefit (Gribble, 1996) and forms the basis of a wide variety of drugs, including the anti–inflammatory agent indomethacin, reserpine and sumatriptan. Indole derivatives are identified as interfering with a G protein–independent signalling pathway of the CRTH2 receptor (Mathiesen et al., 2005). As a part of our studies, we report herein the crystal structure of the title compound, which comprises the bicycle indole moiety, propyne subsituted phenyl ring and nitro methane group, as illustrated in (Fig. 1).

In the title compound, C20H18N2O3, the indole bicycle moiety (C1–C8/N1) is essentially planar with a maximum deviation of -0.0197 (18)Å for N1 atom. The indole moiety (C1–C8/N1) forms a dihedral angle of 78.09 (9)° with the propyne subsituted phenyl ring (C12–C17). In the indole ring system, the dihedral angle between the pyrrole ring (C5–C8/N1) and benzene ring (C1–C6) is 1.17 (10)°.

In the indole moiety, the endocyclic angles at C4 and C6 are contracted to 117.5 (2)° and 118.0 (17)°, respectively, while those at C2, C3 and C5 are expanded to 121.5 (2)°, 121.6 (3)° and 121.2 (3)°, respectively. This would appear to be a real effect caused by the fusion of the smaller pyrrole ring to the six–membered benzene ring, and the strain is taken up by the angular distortion rather than by bond–length distortions (Allen, 1981).

The angles around atom C10: [C7—C10—C12 = 113.88 (13)°, C7—C10—C11 = 110.41 (14)° and C12—C10—C11 = 109.95 (14)°] deviates significantly from ideal tetrahedral values which may be as a result of steric interactions between indole, nitromethane and propyne subsituted phenyl ring. The deviation of atom C10 from the indole moiety is -0.1066 (16)Å. The deviations of atom O3 from the phenyl ring (C12–C17) and propyne group (O3/C18/C19/C20) are 0.0504 (14)Å and 0.3088 (14)Å, respectively.

The oxygen subsituted propyne group is slightly twisted from the phenyl ring (C12–C17) which it is attached as evindenced by the torsion angle C16–C17–O3–C18 = 7.2 (3)°. The propyne group is almost linear, C18–C19C20 angle being 176.5 (2)°, and is also in the flagpole position on O3 atom. The title compound exhibits structural similarities with the already reported related structures (Narayanan et al., 2011; Ranjith et al., 2010).

In the crystal packing, molecules are linked via N—H···O and bifurcated C—H···O intermolecular hydrogen bonds involving the nitro group O atoms as acceptors (Table 1). The symmetry codes are: (i) -y+3/4, x-1/4, -z+3/4; (ii) -y+5/4, x-1/4, z-1/4; (iii) y+1/4, -x+5/4, z-3/4. The packing view of the title compound is shown in (Fig. 2).

For general backround to indoles, see: Gribble (1996); Mathiesen et al. (2005). For related structures, see: Narayanan et al. (2011); Ranjith et al. (2010). For bond-length distortions, see: Allen (1981).

Computing details top

Data collection: APEX2 (Bruker, 2008); cell refinement: SAINT (Bruker, 2008); data reduction: SAINT (Bruker, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and Mercury (Macrae et al., 2008); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).

Figures top
[Figure 1] Fig. 1. The molecular structure of the title compound with the atom numbering scheme. Displacement ellipsoids are drawn at 30% probability level. H atoms are present as small spheres of arbitary radius.
[Figure 2] Fig. 2. The packing arrangement of the title compound viewed down a axis. Dashed lines indicates the N—H···O and bifurcated C—H···O intermolecular hydrogen bonds. Symmetry codes as in the Table 1.
2-Methyl-3-{2-nitro-1-[2-(prop-2-yn-1-yloxy)phenyl]ethyl}-1H-indole top
Crystal data top
C20H18N2O3Dx = 1.268 Mg m3
Mr = 334.36Mo Kα radiation, λ = 0.71073 Å
Tetragonal, I41/aCell parameters from 3954 reflections
Hall symbol: -I 4adθ = 2.5–27.3°
a = 23.3474 (7) ŵ = 0.09 mm1
c = 12.8536 (7) ÅT = 295 K
V = 7006.5 (5) Å3Block, brown
Z = 160.30 × 0.25 × 0.20 mm
F(000) = 2816
Data collection top
Bruker Kappa APEXII
diffractometer
2629 reflections with I > 2σ(I)
Radiation source: fine–focus sealed tubeRint = 0.034
Graphite monochromatorθmax = 27.3°, θmin = 2.5°
ω and φ scansh = 3030
31091 measured reflectionsk = 3030
3954 independent reflectionsl = 1616
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.049Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.149H atoms treated by a mixture of independent and constrained refinement
S = 1.03 w = 1/[σ2(Fo2) + (0.061P)2 + 4.4075P]
where P = (Fo2 + 2Fc2)/3
3954 reflections(Δ/σ)max = 0.001
231 parametersΔρmax = 0.35 e Å3
0 restraintsΔρmin = 0.30 e Å3
Crystal data top
C20H18N2O3Z = 16
Mr = 334.36Mo Kα radiation
Tetragonal, I41/aµ = 0.09 mm1
a = 23.3474 (7) ÅT = 295 K
c = 12.8536 (7) Å0.30 × 0.25 × 0.20 mm
V = 7006.5 (5) Å3
Data collection top
Bruker Kappa APEXII
diffractometer
2629 reflections with I > 2σ(I)
31091 measured reflectionsRint = 0.034
3954 independent reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0490 restraints
wR(F2) = 0.149H atoms treated by a mixture of independent and constrained refinement
S = 1.03Δρmax = 0.35 e Å3
3954 reflectionsΔρmin = 0.30 e Å3
231 parameters
Special details top

Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R–factor wR and goodness of fit S are based on F2, conventional R–factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R–factors(gt) etc. and is not relevant to the choice of reflections for refinement. R–factors based on F2 are statistically about twice as large as those based on F, and R–factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
C10.57180 (8)0.58359 (8)0.28887 (15)0.0561 (5)
H10.60500.59070.25110.067*
C20.54456 (11)0.62723 (10)0.34038 (18)0.0739 (6)
H20.55950.66410.33650.089*
C30.49531 (12)0.61764 (12)0.39812 (19)0.0837 (7)
H30.47840.64800.43350.100*
C40.47114 (10)0.56413 (12)0.40392 (16)0.0746 (6)
H40.43790.55770.44210.090*
C50.49805 (8)0.52014 (9)0.35072 (14)0.0567 (5)
C60.54906 (7)0.52835 (8)0.29372 (12)0.0471 (4)
C70.56448 (7)0.47343 (7)0.25110 (12)0.0456 (4)
C80.52332 (8)0.43530 (9)0.28289 (14)0.0574 (5)
C90.51646 (12)0.37274 (10)0.2625 (2)0.0854 (7)
H9A0.49370.35590.31670.128*
H9B0.55350.35480.26100.128*
H9C0.49780.36730.19670.128*
C100.61764 (7)0.45897 (7)0.19019 (12)0.0461 (4)
H100.61500.41850.17030.055*
C110.67081 (8)0.46567 (9)0.25835 (14)0.0556 (5)
H11A0.70490.45680.21820.067*
H11B0.67380.50490.28260.067*
C120.62457 (7)0.49375 (7)0.09048 (12)0.0466 (4)
C130.66337 (9)0.53799 (9)0.07902 (15)0.0608 (5)
H130.68770.54690.13390.073*
C140.66695 (11)0.56947 (10)0.01207 (17)0.0747 (6)
H140.69360.59890.01820.090*
C150.63101 (11)0.55691 (10)0.09283 (17)0.0741 (6)
H150.63270.57850.15360.089*
C160.59234 (10)0.51273 (9)0.08517 (14)0.0627 (5)
H160.56810.50440.14060.075*
C170.58959 (8)0.48052 (8)0.00541 (13)0.0486 (4)
C180.52168 (9)0.41607 (9)0.06941 (14)0.0626 (5)
H18A0.54760.40810.12660.075*
H18B0.49520.44580.09120.075*
C190.49038 (9)0.36474 (10)0.04196 (16)0.0655 (5)
C200.46475 (12)0.32315 (15)0.0253 (2)0.0902 (8)
N10.48348 (7)0.46368 (8)0.34151 (12)0.0659 (5)
H1A0.45360.44820.36870.079*
N20.66652 (9)0.42633 (9)0.34832 (17)0.0796 (6)
O10.66570 (12)0.44706 (10)0.43438 (16)0.1362 (10)
O20.66138 (13)0.37606 (8)0.3327 (2)0.1423 (10)
O30.55338 (6)0.43482 (6)0.01938 (9)0.0586 (4)
H200.4442 (13)0.2919 (12)0.011 (2)0.118 (11)*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
C10.0576 (11)0.0581 (11)0.0526 (10)0.0033 (9)0.0041 (9)0.0056 (9)
C20.0856 (16)0.0634 (13)0.0727 (14)0.0126 (11)0.0077 (12)0.0021 (11)
C30.0949 (18)0.0863 (17)0.0700 (15)0.0366 (14)0.0004 (13)0.0033 (13)
C40.0628 (13)0.1061 (19)0.0551 (12)0.0235 (13)0.0091 (10)0.0114 (12)
C50.0506 (10)0.0771 (13)0.0423 (9)0.0048 (9)0.0010 (8)0.0119 (9)
C60.0461 (9)0.0606 (10)0.0346 (8)0.0030 (8)0.0055 (7)0.0109 (7)
C70.0482 (9)0.0536 (10)0.0351 (8)0.0032 (7)0.0042 (7)0.0098 (7)
C80.0602 (11)0.0666 (12)0.0453 (9)0.0122 (9)0.0003 (8)0.0121 (9)
C90.1018 (18)0.0704 (15)0.0841 (16)0.0319 (13)0.0091 (14)0.0090 (12)
C100.0505 (9)0.0473 (9)0.0405 (8)0.0002 (7)0.0030 (7)0.0045 (7)
C110.0536 (10)0.0630 (11)0.0503 (10)0.0055 (9)0.0033 (8)0.0066 (9)
C120.0496 (9)0.0515 (9)0.0387 (8)0.0034 (7)0.0057 (7)0.0033 (7)
C130.0667 (12)0.0661 (12)0.0497 (10)0.0107 (9)0.0081 (9)0.0049 (9)
C140.0923 (16)0.0709 (14)0.0610 (13)0.0162 (12)0.0210 (12)0.0106 (11)
C150.1057 (18)0.0701 (13)0.0466 (11)0.0043 (12)0.0202 (11)0.0167 (10)
C160.0816 (14)0.0664 (12)0.0400 (10)0.0116 (11)0.0039 (9)0.0073 (9)
C170.0527 (10)0.0539 (10)0.0392 (8)0.0083 (8)0.0044 (7)0.0031 (7)
C180.0674 (12)0.0758 (13)0.0447 (10)0.0065 (10)0.0129 (9)0.0074 (9)
C190.0575 (12)0.0849 (15)0.0542 (11)0.0005 (11)0.0083 (9)0.0130 (11)
C200.0810 (17)0.109 (2)0.0808 (17)0.0283 (17)0.0087 (13)0.0050 (16)
N10.0560 (9)0.0874 (12)0.0542 (9)0.0139 (9)0.0098 (8)0.0156 (9)
N20.0929 (14)0.0688 (12)0.0771 (13)0.0006 (10)0.0388 (11)0.0223 (10)
O10.211 (3)0.1348 (18)0.0629 (11)0.0503 (17)0.0414 (14)0.0353 (12)
O20.209 (3)0.0599 (11)0.158 (2)0.0096 (13)0.0778 (19)0.0308 (12)
O30.0645 (8)0.0686 (8)0.0428 (7)0.0091 (6)0.0115 (6)0.0054 (6)
Geometric parameters (Å, º) top
C1—C21.371 (3)C11—H11A0.9700
C1—C61.396 (3)C11—H11B0.9700
C1—H10.9300C12—C131.382 (3)
C2—C31.387 (3)C12—C171.399 (2)
C2—H20.9300C13—C141.385 (3)
C3—C41.373 (4)C13—H130.9300
C3—H30.9300C14—C151.367 (3)
C4—C51.384 (3)C14—H140.9300
C4—H40.9300C15—C161.374 (3)
C5—N11.367 (3)C15—H150.9300
C5—C61.411 (2)C16—C171.387 (2)
C6—C71.440 (3)C16—H160.9300
C7—C81.372 (2)C17—O31.373 (2)
C7—C101.506 (2)C18—O31.429 (2)
C8—N11.368 (3)C18—C191.447 (3)
C8—C91.492 (3)C18—H18A0.9700
C9—H9A0.9600C18—H18B0.9700
C9—H9B0.9600C19—C201.160 (4)
C9—H9C0.9600C20—H200.89 (3)
C10—C121.526 (2)N1—H1A0.8600
C10—C111.528 (2)N2—O21.197 (3)
C10—H100.9800N2—O11.208 (3)
C11—N21.480 (3)
C2—C1—C6119.24 (19)C10—C11—H11A109.8
C2—C1—H1120.4N2—C11—H11B109.8
C6—C1—H1120.4C10—C11—H11B109.8
C1—C2—C3121.5 (2)H11A—C11—H11B108.3
C1—C2—H2119.2C13—C12—C17117.67 (16)
C3—C2—H2119.2C13—C12—C10123.84 (16)
C4—C3—C2121.1 (2)C17—C12—C10118.49 (15)
C4—C3—H3119.4C12—C13—C14121.8 (2)
C2—C3—H3119.4C12—C13—H13119.1
C3—C4—C5117.5 (2)C14—C13—H13119.1
C3—C4—H4121.3C15—C14—C13119.4 (2)
C5—C4—H4121.3C15—C14—H14120.3
N1—C5—C4130.19 (19)C13—C14—H14120.3
N1—C5—C6107.22 (17)C14—C15—C16120.67 (19)
C4—C5—C6122.6 (2)C14—C15—H15119.7
C1—C6—C5118.00 (17)C16—C15—H15119.7
C1—C6—C7135.28 (16)C15—C16—C17119.8 (2)
C5—C6—C7106.71 (16)C15—C16—H16120.1
C8—C7—C6106.82 (16)C17—C16—H16120.1
C8—C7—C10125.92 (17)O3—C17—C16124.02 (17)
C6—C7—C10127.11 (15)O3—C17—C12115.38 (14)
N1—C8—C7109.02 (18)C16—C17—C12120.60 (18)
N1—C8—C9119.85 (18)O3—C18—C19108.69 (16)
C7—C8—C9131.1 (2)O3—C18—H18A110.0
C8—C9—H9A109.5C19—C18—H18A110.0
C8—C9—H9B109.5O3—C18—H18B110.0
H9A—C9—H9B109.5C19—C18—H18B110.0
C8—C9—H9C109.5H18A—C18—H18B108.3
H9A—C9—H9C109.5C20—C19—C18176.5 (2)
H9B—C9—H9C109.5C19—C20—H20178 (2)
C7—C10—C12113.88 (13)C5—N1—C8110.22 (15)
C7—C10—C11110.41 (14)C5—N1—H1A124.9
C12—C10—C11109.95 (14)C8—N1—H1A124.9
C7—C10—H10107.4O2—N2—O1123.0 (2)
C12—C10—H10107.4O2—N2—C11119.0 (2)
C11—C10—H10107.4O1—N2—C11117.9 (2)
N2—C11—C10109.25 (15)C17—O3—C18116.90 (14)
N2—C11—H11A109.8
C6—C1—C2—C30.7 (3)C7—C10—C12—C13105.5 (2)
C1—C2—C3—C41.5 (4)C11—C10—C12—C1319.0 (2)
C2—C3—C4—C50.5 (3)C7—C10—C12—C1774.2 (2)
C3—C4—C5—N1179.0 (2)C11—C10—C12—C17161.27 (16)
C3—C4—C5—C61.3 (3)C17—C12—C13—C141.7 (3)
C2—C1—C6—C51.0 (3)C10—C12—C13—C14178.07 (18)
C2—C1—C6—C7179.47 (19)C12—C13—C14—C150.4 (3)
N1—C5—C6—C1178.18 (15)C13—C14—C15—C161.3 (4)
C4—C5—C6—C12.0 (3)C14—C15—C16—C170.1 (3)
N1—C5—C6—C70.71 (19)C15—C16—C17—O3178.42 (18)
C4—C5—C6—C7179.09 (17)C15—C16—C17—C122.1 (3)
C1—C6—C7—C8178.48 (19)C13—C12—C17—O3177.55 (16)
C5—C6—C7—C80.12 (18)C10—C12—C17—O32.7 (2)
C1—C6—C7—C105.8 (3)C13—C12—C17—C162.9 (3)
C5—C6—C7—C10175.64 (15)C10—C12—C17—C16176.84 (16)
C6—C7—C8—N10.52 (19)C4—C5—N1—C8178.7 (2)
C10—C7—C8—N1176.34 (15)C6—C5—N1—C81.1 (2)
C6—C7—C8—C9179.6 (2)C7—C8—N1—C51.0 (2)
C10—C7—C8—C94.6 (3)C9—C8—N1—C5179.79 (18)
C8—C7—C10—C12125.70 (18)C10—C11—N2—O258.0 (3)
C6—C7—C10—C1259.3 (2)C10—C11—N2—O1118.6 (2)
C8—C7—C10—C11110.05 (19)C16—C17—O3—C187.2 (3)
C6—C7—C10—C1164.9 (2)C12—C17—O3—C18173.23 (16)
C7—C10—C11—N260.3 (2)C19—C18—O3—C17174.73 (16)
C12—C10—C11—N2173.18 (16)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1A···O2i0.862.142.997 (2)173
C11—H11A···O1ii0.972.523.433 (3)157
C15—H15···O1iii0.932.573.315 (3)137
Symmetry codes: (i) y+3/4, x1/4, z+3/4; (ii) y+5/4, x1/4, z1/4; (iii) y+1/4, x+5/4, z3/4.

Experimental details

Crystal data
Chemical formulaC20H18N2O3
Mr334.36
Crystal system, space groupTetragonal, I41/a
Temperature (K)295
a, c (Å)23.3474 (7), 12.8536 (7)
V3)7006.5 (5)
Z16
Radiation typeMo Kα
µ (mm1)0.09
Crystal size (mm)0.30 × 0.25 × 0.20
Data collection
DiffractometerBruker Kappa APEXII
Absorption correction
No. of measured, independent and
observed [I > 2σ(I)] reflections
31091, 3954, 2629
Rint0.034
(sin θ/λ)max1)0.646
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.049, 0.149, 1.03
No. of reflections3954
No. of parameters231
H-atom treatmentH atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å3)0.35, 0.30

Computer programs: APEX2 (Bruker, 2008), SAINT (Bruker, 2008), SHELXS97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997) and Mercury (Macrae et al., 2008), SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).

Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1A···O2i0.862.142.997 (2)172.6
C11—H11A···O1ii0.972.523.433 (3)156.5
C15—H15···O1iii0.932.573.315 (3)137.2
Symmetry codes: (i) y+3/4, x1/4, z+3/4; (ii) y+5/4, x1/4, z1/4; (iii) y+1/4, x+5/4, z3/4.
 

Acknowledgements

PN and KS thank Dr Babu Varghese, SAIF, IIT, Chennai, India, for the X–ray intensity data collection and Dr V. Murugan, Head of the Department of Physics, for providing facilities in the department to carry out this work.

References

First citationAllen, F. H. (1981). Acta Cryst. B37, 900–906.  CSD CrossRef CAS Web of Science IUCr Journals Google Scholar
First citationBruker (2008). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA.  Google Scholar
First citationFarrugia, L. J. (1997). J. Appl. Cryst. 30, 565.  CrossRef IUCr Journals Google Scholar
First citationGribble, G. W. (1996). Comprehensive Heterocyclic Chemistry, 2nd ed., Vol. 2, pp. 207–257. New York: Pergamon Press.  Google Scholar
First citationMacrae, C. F., Bruno, I. J., Chisholm, J. A., Edgington, P. R., McCabe, P., Pidcock, E., Rodriguez-Monge, L., Taylor, R., van de Streek, J. & Wood, P. A. (2008). J. Appl. Cryst. 41, 466–470.  Web of Science CSD CrossRef CAS IUCr Journals Google Scholar
First citationMathiesen, J. M., Ulven, T., Martini, L., Gerlach, L. O., Heinemann, A. & Kostenis, E. (2005). Mol. Pharmacol. 68, 393–402.  Web of Science PubMed CAS Google Scholar
First citationNarayanan, P., Sethusankar, K., Ramachandiran, K. & Perumal, P. T. (2011). Acta Cryst. E67, o517.  Web of Science CSD CrossRef IUCr Journals Google Scholar
First citationRanjith, S., Thirunarayanan, A., Raja, S., Rajakumar, P. & SubbiahPandi, A. (2010). Acta Cryst. E66, o2261–o2262.  Web of Science CSD CrossRef CAS IUCr Journals Google Scholar
First citationSheldrick, G. M. (2008). Acta Cryst. A64, 112–122.  Web of Science CrossRef CAS IUCr Journals Google Scholar
First citationSpek, A. L. (2009). Acta Cryst. D65, 148–155.  Web of Science CrossRef CAS IUCr Journals Google Scholar

This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.

Journal logoCRYSTALLOGRAPHIC
COMMUNICATIONS
ISSN: 2056-9890
Follow Acta Cryst. E
Sign up for e-alerts
Follow Acta Cryst. on Twitter
Follow us on facebook
Sign up for RSS feeds