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ISSN: 2056-9890

4,4′-Bi­pyridine–terephthalic acid (1/1)

aDepartment of Chemistry, Youngstown State University, One University Plaza, Youngstown, OH 44555, USA
*Correspondence e-mail: srlovelacecameron@ysu.edu

(Received 24 April 2012; accepted 9 May 2012; online 12 May 2012)

The asymmetric unit of the title compound, C10H8N2·C8H6O4, consists of one half-mol­ecule of each moiety, 4,4′-bipyridine (bpy) and terephthalic acid (bdc), both being located on crystallographic inversion centers. They are linked together via strong inter­molecular O—H⋯N hydrogen bonds, forming infinite chains propagating along [1-21]. The chains are further connected through C—H⋯O inter­actions giving sheets in (012). The sheets are linked via ππ inter­actions between the bpy rings and the bdc–bpy rings [centroid–centroid distances = 3.690 (2) and 3.869 (2) Å], resulting in the formation of a three-dimensional supra­molecular layer-like structure.

Related literature

For dissolution of metal salts, see: Karpova et al. (2004[Karpova, E. V., Zakharov, M. A., Gutnikov, S. I. & Alekseyev, R. S. (2004). Acta Cryst. E60, o2491-o2492.]); Yao et al. (2008[Yao, J. C., Qin, J. H., Sun, Q. B., Qu, L. & Li, Y. G. (2008). Z. Kristallogr. New Cryst. Struct. 223, 11-12.]); Zhao et al. (2007[Zhao, W.-X., Gao, Y.-X., Dong, S.-F., Li, Y. & Zhang, W.-P. (2007). Acta Cryst. E63, o2728.]).

[Scheme 1]

Experimental

Crystal data
  • C10H8N2·C8H6O4

  • Mr = 322.31

  • Triclinic, [P \overline 1]

  • a = 6.783 (4) Å

  • b = 6.895 (4) Å

  • c = 8.161 (5) Å

  • α = 98.340 (8)°

  • β = 95.845 (9)°

  • γ = 104.623 (8)°

  • V = 361.5 (4) Å3

  • Z = 1

  • Mo Kα radiation

  • μ = 0.11 mm−1

  • T = 100 K

  • 0.39 × 0.21 × 0.13 mm

Data collection
  • Bruker SMART APEXII CCD diffractometer

  • Absorption correction: multi-scan (SADABS; Bruker, 2011[Bruker (2011). APEX2, SAINT and SADABS. Bruker AXS Inc, Madison, Wisconsin, USA.]) Tmin = 0.659, Tmax = 0.746

  • 4318 measured reflections

  • 2215 independent reflections

  • 1750 reflections with I > 2σ(I)

  • Rint = 0.020

Refinement
  • R[F2 > 2σ(F2)] = 0.049

  • wR(F2) = 0.143

  • S = 1.05

  • 2215 reflections

  • 111 parameters

  • H atoms treated by a mixture of independent and constrained refinement

  • Δρmax = 0.43 e Å−3

  • Δρmin = −0.33 e Å−3

Table 1
Hydrogen-bond geometry (Å, °)

D—H⋯A D—H H⋯A DA D—H⋯A
O2—H2⋯N1i 1.10 1.49 2.5899 (17) 175
C5—H5⋯O1ii 0.95 2.50 3.231 (3) 134
Symmetry codes: (i) -x+1, -y, -z+1; (ii) -x, -y, -z+1.

Data collection: APEX2 (Bruker, 2011[Bruker (2011). APEX2, SAINT and SADABS. Bruker AXS Inc, Madison, Wisconsin, USA.]); cell refinement: SAINT (Bruker, 2011[Bruker (2011). APEX2, SAINT and SADABS. Bruker AXS Inc, Madison, Wisconsin, USA.]); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]); program(s) used to refine structure: SHELXLE (Hübschle et al., 2011[Hübschle, C. B., Sheldrick, G. M. & Dittrich, B. (2011). J. Appl. Cryst. 44, 1281-1284.]) and SHELXL97 (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]); molecular graphics: DIAMOND (Brandenburg, 2001[Brandenburg, K. (2001). DIAMOND. Crystal Impact GbR, Bonn, Germany.]); software used to prepare material for publication: publCIF (Westrip, 2010[Westrip, S. P. (2010). J. Appl. Cryst. 43, 920-925.]).

Supporting information


Comment top

The title organic compound was obtained as a side-product during part of our investigations into the solvothermal synthesis of magnesium based metal organic framework compounds. Reaction of magnesium nitrate with terephthalic acid and 4,4'-bipyridine at 373 K did not yield an extended framework, but the high solubility of magnesium nitrate in DMF led to formation of the title organic compound in the form of colorless rod-like crystals. Similar dissolution of metal salts in organic solvents, leaving the organic compound as a side-product, have previously been observed (Karpova et al., 2004; Yao et al., 2008; Zhao et al., 2007).

The asymmetric unit of the title organic compound is composed of one half-molecule of each component, that is 4,4'-bipyridine (bpy) and terephthalic acid (bdc). The inversion symmetry within bpy and bdc generates the full molecules (Fig. 1).

Strong inter-molecular O—H···N hydrogen bonds between the bpy and bdc molecules lead to the formation of infinite one-dimensional chains propagating along [1 -2 1] (Table 1 and Fig. 2). The pyridine rings of the bpy molecule exhibit a planar configuration with a dihedral angle of 0° between the planes of the two pyridyl rings. The dihedral angle between the bpy and bdc molecules within the chains is 7.20 (4)°.

The bpy molecules and the bdc molecules in neighbouring chains are π-stacked above one another [centroid-centroid distance of 3.869 (2) Å; symmetry code: -x+1, -y, -z] in an ABAB···fashion resulting in a two-dimensional supramolecular layer-like structure (Fig. 2). The interplanar spacing between the chains, defined as the distance between the planes of neighbouring bpy rings is 3.2512 Å [centroid-centroid distance 3.690 (2) Å; slippage of 1.745 Å]. The layers, formed through π-stacking, are further connected through C-H···O interactions along (012) resulting in a three-dimensional supramolecular-like structure (Fig. 3). Thus the overall structure of the title compound is stabilized by strong hydrogen bonds and π-π interactions.

Related literature top

For dissolution of metal salts, see: Karpova et al. (2004); Yao et al. (2008); Zhao et al. (2007).

Experimental top

The compound was synthesized under solvothermal conditions. In a typical synthesis, Mg(NO3)2.6H2O (0.129 g, 1.0 mmol) and terepthalic acid (0.169 g, 2.0 mmol) were dissolved in DMF (5.0 ml). Then, 4,4'-bipyridine (0.239 g, 3.0 mmol) was added to the reaction mixture and stirred for one hour before transferring the mixture into a glass vial. The final mixture was heated to 373 K (100 °C) for 24 h. The vial was then slowly cooled to room temperature. Slow cooling of the reaction mixture yielded colorless rod-like crystals of the title compound as a minor product, along with an unidentified white powder.

Refinement top

The carboxylic acid H atoms were located in difference electron density maps, but were placed in calculated positions with fixed C—O—H angles, but with the C—C—O—H dihedral angles and the O—H distances freely refined (AFIX 148 command in SHELXTL; Sheldrick, 2008). The C-bound H atoms were included in calculated positions: C-H = 0.95 Å; Uiso(H) = k × Ueq(O,C), where k = 1.5 for carboxylic acid H atoms, and = 1.2 for other H atoms.

Computing details top

Data collection: APEX2 (Bruker, 2011); cell refinement: SAINT (Bruker, 2011); data reduction: SAINT (Bruker, 2011); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXLE (Hübschle et al., 2011) and SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 2001); software used to prepare material for publication: publCIF (Westrip, 2010).

Figures top
[Figure 1] Fig. 1. View of the title organic compound with atom numbering. Displacement ellipsoids are drawn at the 50% probability level [symmetry codes: (i) -x, -y + 1, -z + 1; (ii) -x + 1, -y + 1, -z].
[Figure 2] Fig. 2. A view along the a axis of the two-dimensional supramolecular layer-like structure of the title compound. Green and purple dots represent the hydrogen bonds within the chains and the π···π stacking interactions between the chains, respectively [see Table 1 for details].
[Figure 3] Fig. 3. View of the three-dimensional supramolecular-like structure. Green dots represent the C-H···O hydrogen bonds connecting parallel stacks of chains. The purple arrows represent the π-π interactions within the π-stacks [see Table 1 for details].
4,4'-Bipyridine–terephthalic acid (1/1) top
Crystal data top
C10H8N2·C8H6O4Z = 1
Mr = 322.31F(000) = 168
Triclinic, P1Dx = 1.480 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.783 (4) ÅCell parameters from 245 reflections
b = 6.895 (4) Åθ = 4.3–31.4°
c = 8.161 (5) ŵ = 0.11 mm1
α = 98.340 (8)°T = 100 K
β = 95.845 (9)°Rod, colorless
γ = 104.623 (8)°0.39 × 0.21 × 0.13 mm
V = 361.5 (4) Å3
Data collection top
Bruker SMART APEXII CCD
diffractometer
2215 independent reflections
Radiation source: fine-focus sealed tube1750 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.020
ω scansθmax = 31.5°, θmin = 2.6°
Absorption correction: multi-scan
(SADABS; Bruker, 2011)
h = 99
Tmin = 0.659, Tmax = 0.746k = 109
4318 measured reflectionsl = 1111
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.049Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.143H atoms treated by a mixture of independent and constrained refinement
S = 1.05 w = 1/[σ2(Fo2) + (0.0819P)2 + 0.0211P]
where P = (Fo2 + 2Fc2)/3
2215 reflections(Δ/σ)max < 0.001
111 parametersΔρmax = 0.43 e Å3
0 restraintsΔρmin = 0.33 e Å3
Crystal data top
C10H8N2·C8H6O4γ = 104.623 (8)°
Mr = 322.31V = 361.5 (4) Å3
Triclinic, P1Z = 1
a = 6.783 (4) ÅMo Kα radiation
b = 6.895 (4) ŵ = 0.11 mm1
c = 8.161 (5) ÅT = 100 K
α = 98.340 (8)°0.39 × 0.21 × 0.13 mm
β = 95.845 (9)°
Data collection top
Bruker SMART APEXII CCD
diffractometer
2215 independent reflections
Absorption correction: multi-scan
(SADABS; Bruker, 2011)
1750 reflections with I > 2σ(I)
Tmin = 0.659, Tmax = 0.746Rint = 0.020
4318 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0490 restraints
wR(F2) = 0.143H atoms treated by a mixture of independent and constrained refinement
S = 1.05Δρmax = 0.43 e Å3
2215 reflectionsΔρmin = 0.33 e Å3
111 parameters
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
C10.11190 (17)0.19752 (17)0.67373 (14)0.0175 (2)
C20.05394 (16)0.35241 (16)0.58115 (13)0.0155 (2)
C30.14077 (17)0.38403 (17)0.58505 (14)0.0178 (2)
H30.23700.30480.64270.021*
C40.19359 (17)0.46838 (17)0.49560 (14)0.0173 (2)
H40.32600.44640.49240.021*
C50.44781 (18)0.16270 (17)0.21492 (14)0.0198 (2)
H50.35700.09430.28240.024*
C60.39356 (17)0.31190 (17)0.13785 (14)0.0187 (2)
H60.26640.34210.15120.022*
C70.52575 (16)0.41778 (16)0.04063 (13)0.0152 (2)
C80.70734 (17)0.36148 (17)0.02350 (14)0.0181 (2)
H80.80200.42800.04220.022*
C90.74945 (17)0.20858 (17)0.10241 (14)0.0186 (2)
H90.87310.17140.08810.022*
N10.62329 (15)0.11110 (14)0.19795 (12)0.0181 (2)
O10.00764 (13)0.12024 (14)0.77275 (11)0.0266 (2)
O20.28465 (13)0.15786 (13)0.63990 (11)0.0228 (2)
H20.3174 (12)0.044 (2)0.7131 (16)0.034*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
C10.0174 (5)0.0182 (5)0.0173 (5)0.0061 (4)0.0004 (4)0.0040 (4)
C20.0166 (5)0.0167 (5)0.0140 (5)0.0060 (4)0.0013 (4)0.0032 (4)
C30.0165 (5)0.0207 (5)0.0181 (5)0.0056 (4)0.0042 (4)0.0067 (4)
C40.0146 (5)0.0214 (5)0.0182 (5)0.0079 (4)0.0030 (4)0.0047 (4)
C50.0202 (5)0.0197 (5)0.0214 (5)0.0060 (4)0.0046 (4)0.0074 (4)
C60.0169 (5)0.0207 (5)0.0216 (5)0.0086 (4)0.0043 (4)0.0065 (4)
C70.0152 (5)0.0153 (5)0.0149 (5)0.0048 (4)0.0002 (4)0.0025 (4)
C80.0162 (5)0.0205 (5)0.0195 (5)0.0063 (4)0.0030 (4)0.0064 (4)
C90.0159 (5)0.0200 (5)0.0214 (5)0.0080 (4)0.0010 (4)0.0042 (4)
N10.0187 (5)0.0179 (5)0.0184 (5)0.0069 (4)0.0001 (4)0.0037 (3)
O10.0230 (4)0.0325 (5)0.0316 (5)0.0112 (4)0.0088 (4)0.0193 (4)
O20.0222 (4)0.0274 (5)0.0267 (5)0.0150 (3)0.0080 (3)0.0126 (3)
Geometric parameters (Å, º) top
C1—O11.2198 (14)C5—H50.9500
C1—O21.3152 (15)C6—C71.3960 (16)
C1—C21.5004 (17)C6—H60.9500
C2—C41.3922 (16)C7—C81.3957 (16)
C2—C31.3945 (17)C7—C7ii1.489 (2)
C3—C4i1.3883 (16)C8—C91.3853 (16)
C3—H30.9500C8—H80.9500
C4—C3i1.3883 (16)C9—N11.3377 (15)
C4—H40.9500C9—H90.9500
C5—N11.3399 (16)O2—H21.1019
C5—C61.3859 (17)
O1—C1—O2124.24 (11)C5—C6—C7120.01 (11)
O1—C1—C2121.98 (11)C5—C6—H6120.0
O2—C1—C2113.77 (10)C7—C6—H6120.0
C4—C2—C3119.74 (10)C8—C7—C6116.69 (10)
C4—C2—C1120.93 (10)C8—C7—C7ii121.97 (12)
C3—C2—C1119.31 (10)C6—C7—C7ii121.34 (12)
C4i—C3—C2119.79 (10)C9—C8—C7119.94 (10)
C4i—C3—H3120.1C9—C8—H8120.0
C2—C3—H3120.1C7—C8—H8120.0
C3i—C4—C2120.48 (11)N1—C9—C8122.74 (11)
C3i—C4—H4119.8N1—C9—H9118.6
C2—C4—H4119.8C8—C9—H9118.6
N1—C5—C6122.57 (11)C9—N1—C5118.02 (10)
N1—C5—H5118.7C1—O2—H2109.5
C6—C5—H5118.7
O1—C1—C2—C4166.89 (11)N1—C5—C6—C71.27 (18)
O2—C1—C2—C411.94 (15)C5—C6—C7—C81.53 (17)
O1—C1—C2—C311.33 (17)C5—C6—C7—C7ii178.58 (12)
O2—C1—C2—C3169.83 (10)C6—C7—C8—C90.57 (17)
C4—C2—C3—C4i0.35 (18)C7ii—C7—C8—C9179.53 (11)
C1—C2—C3—C4i177.90 (10)C7—C8—C9—N10.75 (18)
C3—C2—C4—C3i0.35 (18)C8—C9—N1—C51.07 (17)
C1—C2—C4—C3i177.87 (10)C6—C5—N1—C90.05 (17)
Symmetry codes: (i) x, y+1, z+1; (ii) x+1, y+1, z.
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O2—H2···N1iii1.101.492.5899 (17)175
C5—H5···O1iv0.952.503.231 (3)134
Symmetry codes: (iii) x+1, y, z+1; (iv) x, y, z+1.

Experimental details

Crystal data
Chemical formulaC10H8N2·C8H6O4
Mr322.31
Crystal system, space groupTriclinic, P1
Temperature (K)100
a, b, c (Å)6.783 (4), 6.895 (4), 8.161 (5)
α, β, γ (°)98.340 (8), 95.845 (9), 104.623 (8)
V3)361.5 (4)
Z1
Radiation typeMo Kα
µ (mm1)0.11
Crystal size (mm)0.39 × 0.21 × 0.13
Data collection
DiffractometerBruker SMART APEXII CCD
diffractometer
Absorption correctionMulti-scan
(SADABS; Bruker, 2011)
Tmin, Tmax0.659, 0.746
No. of measured, independent and
observed [I > 2σ(I)] reflections
4318, 2215, 1750
Rint0.020
(sin θ/λ)max1)0.736
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.049, 0.143, 1.05
No. of reflections2215
No. of parameters111
H-atom treatmentH atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å3)0.43, 0.33

Computer programs: APEX2 (Bruker, 2011), SAINT (Bruker, 2011), SHELXS97 (Sheldrick, 2008), SHELXLE (Hübschle et al., 2011) and SHELXL97 (Sheldrick, 2008), DIAMOND (Brandenburg, 2001), publCIF (Westrip, 2010).

Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O2—H2···N1i1.101.492.5899 (17)175
C5—H5···O1ii0.952.503.231 (3)134
Symmetry codes: (i) x+1, y, z+1; (ii) x, y, z+1.
 

Acknowledgements

We thank the Department of Energy (DOE), USA, for financial support. The X-ray diffractometer was funded by the National Science Foundation (grant 0087210), Ohio Board of Regents (grant CAP-491), and by Youngstown State University.

References

First citationBrandenburg, K. (2001). DIAMOND. Crystal Impact GbR, Bonn, Germany.  Google Scholar
First citationBruker (2011). APEX2, SAINT and SADABS. Bruker AXS Inc, Madison, Wisconsin, USA.  Google Scholar
First citationHübschle, C. B., Sheldrick, G. M. & Dittrich, B. (2011). J. Appl. Cryst. 44, 1281–1284.  Web of Science CrossRef IUCr Journals Google Scholar
First citationKarpova, E. V., Zakharov, M. A., Gutnikov, S. I. & Alekseyev, R. S. (2004). Acta Cryst. E60, o2491–o2492.  Web of Science CSD CrossRef IUCr Journals Google Scholar
First citationSheldrick, G. M. (2008). Acta Cryst. A64, 112–122.  Web of Science CrossRef CAS IUCr Journals Google Scholar
First citationWestrip, S. P. (2010). J. Appl. Cryst. 43, 920–925.  Web of Science CrossRef CAS IUCr Journals Google Scholar
First citationYao, J. C., Qin, J. H., Sun, Q. B., Qu, L. & Li, Y. G. (2008). Z. Kristallogr. New Cryst. Struct. 223, 11–12.  CAS Google Scholar
First citationZhao, W.-X., Gao, Y.-X., Dong, S.-F., Li, Y. & Zhang, W.-P. (2007). Acta Cryst. E63, o2728.  Web of Science CSD CrossRef IUCr Journals Google Scholar

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ISSN: 2056-9890
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