research communications\(\def\hfill{\hskip 5em}\def\hfil{\hskip 3em}\def\eqno#1{\hfil {#1}}\)

Journal logoCRYSTALLOGRAPHIC
COMMUNICATIONS
ISSN: 2056-9890
Volume 71| Part 7| July 2015| Pages 861-863

Crystal structure of 4-hy­dr­oxy­pyridin-1-ium 3,5-di­carb­­oxy­benzoate

CROSSMARK_Color_square_no_text.svg

aDepartment of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN 46556-5670, USA
*Correspondence e-mail: aoliver2@nd.edu

Edited by S. Parkin, University of Kentucky, USA (Received 7 June 2015; accepted 19 June 2015; online 27 June 2015)

The structure of the title salt, C5H6NO+·C9H5O6, (I), shows that 4-hy­droxy­pyridine has abstracted an H atom from benzene-1,3,5-tri­carb­oxy­lic acid, yielding a pyridinium cation and carboxyl­ate anion. The two ions form an extensive three-dimensional hydrogen-bonded network throughout the crystal. The hydrogen bonds that comprise the core of the network are considered strong, with O—H⋯O and N—H⋯O donor-to-acceptor distances ranging from 2.533 (2) to 2.700 (2) Å. Packing is further enhanced by π-stacking of the cations and anions with like species [centroid–centroid distance = 3.6206 (13) Å].

1. Chemical Context

As a study in crystal engineering utilizing hydrogen bonding between disparate mol­ecules (Desiraju, 2003[Desiraju, G. R. (2003). J. Mol. Struct. 656, 5-15.]), we have been investigating the cocrystallization of various pyridine compounds with benzene carb­oxy­lic acids (Staun & Oliver, 2012[Staun, S. L. & Oliver, A. G. (2012). Acta Cryst. C68, o84-o87.]). From previous work, 4-hy­droxy­pyridine undergoes hydrogen migration from the hy­droxy O to the pyridine N atom, yielding 4-pyridone (Tyl et al., 2008[Tyl, A., Nowak, M. & Kusz, J. (2008). Acta Cryst. C64, o661-o664.]). We were surprised to find that in the case of 4-hy­droxy­pyridin-1-ium 3,5-di­carb­oxy­benzoate, (I), an H atom is abstracted from one carb­oxy­lic acid group, yielding a pyridinium salt. This result allows for the hy­droxy O and pyridine N atom to both act as hydrogen-bond donors, rather than the donor/acceptor situation of the 4-pyridone species. These two mol­ecules have been incorporated as linker species in metal–organic frameworks (Guo et al., 2011[Guo, J., Ma, J.-F., Liu, B., Kan, W.-Q. & Yang, J. (2011). Cryst. Growth Des. 11, 3609-3621.]).

[Scheme 1]

2. Structural Commentary

The structure of (I) shows that the 4-hy­droxy­pyridine has abstracted an H atom from the benzene­tri­carb­oxy­lic acid, yielding a pyridinium cation and a carboxyl­ate anion (Fig. 1[link]). Bond distances about the pyridine ring show some localization of the bonds: C1—C2 and C4—C5 are slightly shorter than the ideal aromatic distance [1.367 (3) and 1.369 (3) Å, respectively, cf. 1.390 Å for an aromatic C—C bond]. The N1—C1 and N1—C5 distances are typical for an aromatic N atom [1.345 (3) and 1.348 (3) Å, respectively]. The remaining bonds within the ring display typical aromatic distances [C2—C3 = 1.405 (3) Å and C3—C4 = 1.402 (3) Å]. The C3—O1 distance of 1.326 (2) Å is typical for a hy­droxy O atom bound to an aromatic ring. Bond angles within the pyridine ring are unexceptional.

[Figure 1]
Figure 1
Labeling scheme for (I). Displacement ellipsoids are depicted at the 50% probability level. The inter-ion hydrogen bond is shown as a dashed red line.

Two of the three carb­oxy­lic acid groups show distinct single- and double-bond character [C12—O3 = 1.305 (3) Å and C14—O7 = 1.332 (3) Å; C12—O2 = 1.224 (2) Å and C14—O6 = 1.204 (3) Å]. The remaining carboxyl­ate group displays C—O bond distances that are similar to each other and indicate delocalization of the C—O bonds [1.268 (3) and 1.249 (2) Å for C13—O4 and C4—O5, respectively], supporting the proposed single negative charge on the benzene­tri­carb­oxy­lic acid mol­ecule. This is further supported by the presence of H atoms, located in a difference Fourier map, on atoms O3 and O7. Bond distances and angles within the benzene ring are as expected.

3. Supra­molecular Features

The local inter­molecular contacts consist of the pyridinium cation forming a hydrogen bond from the hy­droxy group to the anionic carboxyl­ate group (O1⋯O5; see Table 1[link] for detailed contacts) and from pyridine atom N1 to carboxyl­ate atom O4i [symmetry code: (i) −x + [{1\over 2}], y + [{1\over 2}], z − [{1\over 2}]]. Carb­oxy­lic acid atoms O3 and O7 are donors for hydrogen bonds to atoms O4ii and O2iii, respectively [symmetry codes: (ii) −x, −y, z − [{1\over 2}]; (iii) −x, −y + 1, z + [{1\over 2}]]. Since these hydrogen bonds extend over several mol­ecules, an extensive hydrogen-bonded network exists in this structure.

Table 1
Hydrogen-bond geometry (Å, °)

D—H⋯A D—H H⋯A DA D—H⋯A
O1—H1O⋯O5 0.95 (3) 1.59 (4) 2.533 (2) 171 (3)
N1—H1N⋯O4i 0.98 (3) 1.73 (3) 2.700 (2) 173 (4)
O3—H3O⋯O4ii 0.93 (3) 1.65 (3) 2.574 (2) 172 (3)
O7—H7O⋯O2iii 0.90 (3) 1.79 (3) 2.678 (2) 166 (3)
Symmetry codes: (i) [-x+{\script{1\over 2}}, y+{\script{1\over 2}}, z-{\script{1\over 2}}]; (ii) [-x, -y, z-{\script{1\over 2}}]; (iii) [-x, -y+1, z+{\script{1\over 2}}].

Pertinent features of this extended network are an R44(28) ring comprised of 3,5-di­carb­oxy­benzoate ions (Fig. 2[link]) (Bernstein et al., 1995[Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl. 34, 1555-1573.]). The carb­oxy­lic acid groups are involved in the hydrogen bonding within this ring. There is also an R66(44) ring of 3,5-di­carb­oxy­benzoate ions, that incorporate a different chain of carb­oxy­lic acid groups. These rings are bridged by the 4-hy­droxy­pyridinium cations resulting in the three-dimensional network. The hydrogen bonds within the structure are surprisingly strong, with O—H⋯O and N—H⋯O distances ranging from 2.533 (2) to 2.700 (2) Å (Table 1[link]).

[Figure 2]
Figure 2
A view of (I) approximately along the crystallographic c axis. Color code: blue represents the R44(28) ring, purple the R66(44) ring, and green the bridging 4-hy­droxy­pyridinium cations.

The cations and anions form homogeneous π-stacked columns parallel to the c axis, that is, 4-pyridinium cations stacking with other cations and 3,5-di­carb­oxy­benzoate anions stacking with other anions. The centroid-to-centroid distances for both the pyridinium and the di­carb­oxy­benzoate inter­actions are 3.6206 (13) Å, i.e. the c-axis spacing. The centroid-to-perpendicular distances are 3.3629 (9) Å for the cation and 3.4372 (9) Å for the anion. Both measurements are within accepted ππ contact ranges (see Table 2[link]; Spek, 2009[Spek, A. L. (2009). Acta Cryst. D65, 148-155.]).

Table 2
π-stacking inter­actions within (I)

Inter­action CgCg (Å) Cg⋯perp (Å)
Cg1⋯Cg1i 3.6206 (13) 3.4373 (9)
Cg2⋯Cg2i 3.6206 (13) 3.3627 (9)
Cg1 is the centroid of the 3,5-di­carb­oxy­benzoate ring, Cg2 is the centroid of the 4-hy­droxy­pyridinium ring [symmetry code: (i) x, y, 1 + z], CgCg is the centroid-to-centroid distance, and Cg⋯perp is the distance to the plane perpendicular to the ring centroid.

4. Database Survey

A search of the Cambridge Structural Database (CSD, Version 5.36 plus 3 updates; Groom & Allen, 2014[Groom, C. R. & Allen, F. H. (2014). Angew. Chem. Int. Ed. 53, 662-671.]) for 4-hy­droxy­pyridine and benzene­tri­carb­oxy­lic acid gave only five hits. In the compound that is most closely related to the title compound, namely benzene-1,3,5-tri­carb­oxy­lic acid pyridin-4(1H)-one (Campos-Gaxiola et al., 2014[Campos-Gaxiola, J. J., Zamora Falcon, F., Corral Higuera, R., Höpfl, H. & Cruz-Enríquez, A. (2014). Acta Cryst. E70, o453-o454.]), there are three mol­ecules of 4-pyridone present in the asymmetric unit. Benzene­tri­carb­oxy­lic acid and a tetra­kis­[(pyridin-4-yl­oxy)meth­yl]methane moiety (incorporating a 4-hy­droxy­pyridine functionality) have been utilized in the devlopment of frameworks incorporating copper and cadmium (Guo et al., 2011[Guo, J., Ma, J.-F., Liu, B., Kan, W.-Q. & Yang, J. (2011). Cryst. Growth Des. 11, 3609-3621.]).

5. Synthesis and Crystallization

To a solution of benzene-1,3,5-tri­carb­oxy­lic acid (0.035 g, 1.24 mmol) in MeOH (3 ml) in a 20 ml vial was added a solution of 4-hy­droxy­pyridine (0.0218 g, 1.77 mmol) in MeOH (3 ml). The mixture was shaken vigorously, covered with perforated Parafilm and allowed to evaporate slowly over a period of 5 d, yielding colorless rod-like crystals.

6. Refinement

Crystal data, data collection and structure refinement details are summarized in Table 3[link]. Carb­oxy­lic, hy­droxy, and pyridinium H atoms were initally located in a difference Fourier map. H atoms on the 4-hy­droxy­pyridinium cation were refined freely. H atoms on the carb­oxy­lic acid groups were included with refined coordinates and atomic displacement parameters tied to that of the O atom to which they are bonded. C—H hydrogens were included in idealized positions riding on the C atom to which they are bonded, with C—H distances constrained to 0.95 Å and Uiso(H) = 1.2 Ueq(C).

Table 3
Experimental details

Crystal data
Chemical formula C5H6NO+·C9H5O6
Mr 305.24
Crystal system, space group Orthorhombic, Pna21
Temperature (K) 122
a, b, c (Å) 29.3465 (10), 12.2113 (5), 3.6206 (2)
V3) 1297.47 (10)
Z 4
Radiation type Cu Kα
μ (mm−1) 1.10
Crystal size (mm) 0.11 × 0.06 × 0.06
 
Data collection
Diffractometer Bruker APEXII
Absorption correction Numerical (SADABS; Krause et al., 2015[Krause, L., Herbst-Irmer, R., Sheldrick, G. M. & Stalke, D. (2015). J. Appl. Cryst. 48, 3-10.])
Tmin, Tmax 0.694, 0.753
No. of measured, independent and observed [I > 2σ(I)] reflections 6000, 2322, 2172
Rint 0.018
(sin θ/λ)max−1) 0.614
 
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.028, 0.071, 1.05
No. of reflections 2322
No. of parameters 213
No. of restraints 1
H-atom treatment H atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å−3) 0.15, −0.19
Absolute structure Flack x determined using 786 quotients [(I+) − (I)]/[(I+) + (I)] (Parsons et al., 2013[Parsons, S., Flack, H. D. & Wagner, T. (2013). Acta Cryst. B69, 249-259.])
Absolute structure parameter 0.20 (8)
Computer programs: APEX2 and SAINT (Bruker 2012[Bruker (2012). APEX2 and SAINT. Bruker-Nonius AXS Inc. Madison, Wisconsin, USA.]), SHELXS97 (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]), SHELXL2014 (Sheldrick, 2015[Sheldrick, G. M. (2015). Acta Cryst. C71, 3-8.]), OLEX2 (Dolomanov et al., 2009[Dolomanov, O. V., Bourhis, L. J., Gildea, R. J., Howard, J. A. K. & Puschmann, H. (2009). J. Appl. Cryst. 42, 339-341.]), Mercury (Macrae et al., 2008[Macrae, C. F., Bruno, I. J., Chisholm, J. A., Edgington, P. R., McCabe, P., Pidcock, E., Rodriguez-Monge, L., Taylor, R., van de Streek, J. & Wood, P. A. (2008). J. Appl. Cryst. 41, 466-470.]), POVRay (Cason, 2003[Cason, C. J. (2003). POV-RAY. Persistence of Vision Ray Tracer Pty Ltd, Victoria, Australia.]), publCIF (Westrip, 2010[Westrip, S. P. (2010). J. Appl. Cryst. 43, 920-925.]) and PLATON (Spek, 2009[Spek, A. L. (2009). Acta Cryst. D65, 148-155.]).

The compound is achiral, but crystallizes with a noncentrosymmetric, polar space group. The Flack x parameter refined to 0.20 (8), which suggests the possibility of a small amount of inversion twinnning (Parsons et al., 2013[Parsons, S., Flack, H. D. & Wagner, T. (2013). Acta Cryst. B69, 249-259.]), but the strength of the anomalous signal is very weak. We compared both a model twinned by inversion and the untwinned model, and there was no significant difference. We therefore elected to model the structure without inclusion of a twin component.

Supporting information


Chemical Context top

As a study in crystal engineering utilizing hydrogen bonding between disparate molecules (Desiraju, 2003), we have been investigating the cocrystallization of various pyridine compounds with benzene carb­oxy­lic acids (Staun & Oliver, 2012). From previous work, 4-hy­droxy­pyridine undergoes hydrogen migration from the hy­droxy O to the pyridine N atom, yielding 4-pyridone (Tyl et al., 2008). We were surprised to find that in the case of 4-hy­droxy­pyridin-1-ium 3,5-di­carb­oxy­benzoate, (I), an H atom is abstracted from one carb­oxy­lic acid group, yielding a pyridinium salt. This result allows for the hy­droxy O and pyridine N atom to both act as hydrogen-bond donors, rather than the donor/acceptor situation of the 4-pyridone species. These two molecules have been incorporated as linker species in metal–organic frameworks (Guo et al., 2011).

Structural Commentary top

The structure of (I) shows that the 4-hy­droxy­pyridine has abstracted an H atom from the benzene­tri­carb­oxy­lic acid, yielding a pyridinium cation and a carboxyl­ate anion (Fig. 1). Bond distances about the pyridine ring show some localization of the bonds: C1—C2 and C4—C5 are slightly shorter than the ideal aromatic distance [1.367 (3) and 1.369 (3) Å, respectively, cf. 1.390 Å for an aromatic C—C bond]. The N1—C1 and N1—C5 distances are typical for an aromatic N atom [1.345 (3) and 1.348 (3) Å, respectively]. The remaining bonds within the ring display typical aromatic distances [C2—C3 = 1.405 (3) Å and C3—C4 = 1.402 (3) Å]. The C3—O1 distance of 1.326 (2) Å is typical for a hy­droxy O atom bound to an aromatic ring. Bond angles within the pyridine ring are unexceptional.

Two of the three carb­oxy­lic acid groups show distinct single- and double-bond character [C12—O3 = 1.305 (3) Å and C14—O7 = 1.332 (3) Å; C12—O2 = 1.224 (2) Å and C14—O6 = 1.204 (3) Å]. The remaining carboxyl­ate group displays C—O bond distances that are similar to each other and indicate delocalization of the C—O bonds [1.268 (3) and 1.249 (2) Å for C13—O4 and C4—O5, respectively], supporting the proposed single negative charge on the benzene­tri­carb­oxy­lic acid molecule. This is further supported by the presence of H atoms, located in a difference Fourier map, on atoms O3 and O7. Bond distances and angles within the benzene ring are as expected.

Supra­molecular Features top

The local inter­molecular contacts consist of the pyridinium cation forming a hydrogen bond from the hy­droxy group to the anionic carboxyl­ate group (O1···O5; see Table 1 for detailed contacts) and from pyridine atom N1 to carboxyl­ate atom O4i [symmetry code: (i) -x+1/2, y+1/2, z-1/2]. Carb­oxy­lic acid atoms O3 and O7 are donors for hydrogen bonds to atoms O4ii and O2iii, respectively [symmetry codes: (ii) -x, -y, z-1/2; (iii) -x, -y+1, z+1/2]. Since these hydrogen bonds extend over several molecules, an extensive hydrogen-bonded network exists in this structure.

Pertinent features of this extended network are an R44(28) ring comprised of 3,5-di­carb­oxy­benzoate ions (Fig. 2) (Bernstein et al., 1995). The carb­oxy­lic acid groups are involved in the hydrogen bonding within this ring. There is also an R66(44) ring of 3,5-di­carb­oxy­benzoate ions, that incorporate a different chain of carb­oxy­lic acid groups. These rings are bridged by the 4-hy­droxy­pyridinium cations resulting in the three-dimensional network. The hydrogen bonds within the structure are surprisingly strong, with O—H···O and N—H···O distances ranging from 2.533 (2) to 2.700 (2) Å (Table 1).

The cations and anions form homogeneous π-stacked columns parallel to the c axis, that is, 4-pyridinium cations stacking with other cations and 3,5-di­carb­oxy­benzoate anions stacking with other anions. The centroid-to-centroid distances for both the pyridinium and the di­carb­oxy­benzoate inter­actions are 3.6206 (13) Å, i.e. the c-axis spacing. The centroid-to-perpendicular distances are 3.3629 (9) Å for the cation and 3.4372 (9) Å for the anion. Both measurements are within accepted ππ contact ranges (see Table 2; Spek, 2009).

Database Survey top

A search of the Cambridge Structural Database (CSD, Version 5.36 plus 3 updates; Groom & Allen, 2014) for 4-hy­droxy­pyridine and benzene­tri­carb­oxy­lic acid gave only five hits. In the compound that is most closely related to the title compound, namely benzene-1,3,5-tri­carb­oxy­lic acid pyridin-4(1H)-one (Campos-Gaxiola et al., 2014), there are three molecules of 4-pyridone present in the asymmetric unit. Benzene­tri­carb­oxy­lic acid and a tetra­kis[(pyridin-4-yl­oxy)methyl]­methane moiety (incorporating a 4-hy­droxy­pyridine functionality) have been utilized in the devlopment of frameworks incorporating copper and cadmium (Guo et al., 2011).

Synthesis and Crystallization top

To a solution of benzene-1,3,5-tri­carb­oxy­lic acid (0.035 g, 1.24 mmol) in MeOH (3 ml) in a 20 ml vial was added a solution of 4-hy­droxy­pyridine (0.0218 g, 1.77 mmol) in MeOH (3 ml). The mixture was shaken vigorously, covered with perforated Parafilm and allowed to evaporate slowly over a period of 5 d, yielding colorless rod-like crystals.

Refinement top

Crystal data, data collection and structure refinement details are summarized in Table 3. Carb­oxy­lic, hy­droxy, and pyridinium H atoms were initally located in a difference Fourier map. H atoms on the 4-hy­droxy­pyridinium cation were refined freely. H atoms on the carb­oxy­lic acid groups were included with refined coordinates and atomic displacement parameters tied to that of the O atom to which they are bonded. C—H hydrogens were included in idealized positions riding on the C atom to which they are bonded, with C—H distances constrained to 0.95 Å and Uiso(H) = 1.2 Ueq(C).

The compound is achiral, but crystallizes with a noncentrosymmetric, polar space group. The Flack x parameter refined to 0.20 (8), which suggests the possibility of a small amount of inversion twinnning (Parsons et al., 2013), but the strength of the anomalous signal is very weak. We compared both a model twinned by inversion and the untwinned model, and there was no significant difference. We therefore elected to model the structure without inclusion of a twin component.

Computing details top

Data collection: APEX2 (Bruker, 2012); cell refinement: SAINT (Bruker 2012); data reduction: SAINT (Bruker 2012); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015); molecular graphics: OLEX2 (Dolomanov et al., 2009), Mercury (Macrae et al., 2008) and POVRay (Cason, 2003); software used to prepare material for publication: publCIF (Westrip, 2010) and PLATON (Spek, 2009).

Figures top
[Figure 1] Fig. 1. Labeling scheme for (I). Displacement ellipsoids are depicted at the 50% probability level. The inter-ion hydrogen bond is shown as a dashed red line.
[Figure 2] Fig. 2. A view of (I) approximately along the crystallographic c axis. Color code: blue represents the R44(28) ring, purple the R66(44) ring, and green the bridging 4-hydroxypyridinium cations.
4-Hydroxypyridin-1-ium 3,5dicarboxybenzoate top
Crystal data top
C5H6NO+·C9H5O6Dx = 1.563 Mg m3
Mr = 305.24Cu Kα radiation, λ = 1.54184 Å
Orthorhombic, Pna21Cell parameters from 2373 reflections
a = 29.3465 (10) Åθ = 3.4–71.2°
b = 12.2113 (5) ŵ = 1.10 mm1
c = 3.6206 (2) ÅT = 122 K
V = 1297.47 (10) Å3Rod, colorless
Z = 40.11 × 0.06 × 0.06 mm
F(000) = 632
Data collection top
Bruker APEXII
diffractometer
2322 independent reflections
Radiation source: Incoatec micro-focus2172 reflections with I > 2σ(I)
Detector resolution: 8.33 pixels mm-1Rint = 0.018
combination of ω and ϕ–scansθmax = 71.2°, θmin = 3.0°
Absorption correction: numerical
SADABS (Krause et al., 2015)
h = 2735
Tmin = 0.694, Tmax = 0.753k = 1314
6000 measured reflectionsl = 44
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.028H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.071 w = 1/[σ2(Fo2) + (0.0441P)2 + 0.1815P]
where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max = 0.001
2322 reflectionsΔρmax = 0.15 e Å3
213 parametersΔρmin = 0.19 e Å3
1 restraintAbsolute structure: Flack x determined using 786 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013)
Primary atom site location: structure-invariant direct methodsAbsolute structure parameter: 0.20 (8)
Crystal data top
C5H6NO+·C9H5O6V = 1297.47 (10) Å3
Mr = 305.24Z = 4
Orthorhombic, Pna21Cu Kα radiation
a = 29.3465 (10) ŵ = 1.10 mm1
b = 12.2113 (5) ÅT = 122 K
c = 3.6206 (2) Å0.11 × 0.06 × 0.06 mm
Data collection top
Bruker APEXII
diffractometer
2322 independent reflections
Absorption correction: numerical
SADABS (Krause et al., 2015)
2172 reflections with I > 2σ(I)
Tmin = 0.694, Tmax = 0.753Rint = 0.018
6000 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.028H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.071Δρmax = 0.15 e Å3
S = 1.05Δρmin = 0.19 e Å3
2322 reflectionsAbsolute structure: Flack x determined using 786 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013)
213 parametersAbsolute structure parameter: 0.20 (8)
1 restraint
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
O10.23997 (5)0.04165 (12)0.3072 (5)0.0195 (4)
H1O0.2112 (11)0.062 (3)0.405 (11)0.057 (11)*
N10.32385 (6)0.30371 (16)0.1767 (5)0.0181 (4)
H1N0.3450 (9)0.365 (3)0.166 (11)0.048 (10)*
C10.33796 (7)0.2029 (2)0.0796 (6)0.0186 (5)
H1A0.36790.19330.01570.022*
C20.30997 (6)0.11410 (19)0.1159 (7)0.0169 (4)
H2A0.32010.04330.04440.020*
C30.26602 (6)0.12932 (17)0.2608 (6)0.0145 (4)
C40.25177 (7)0.23551 (18)0.3521 (6)0.0160 (4)
H4A0.22180.24810.44240.019*
C50.28155 (7)0.32085 (18)0.3095 (6)0.0174 (4)
H5A0.27230.39290.37410.021*
O20.06609 (4)0.25817 (12)0.5787 (5)0.0182 (3)
O30.04180 (5)0.08670 (13)0.5070 (5)0.0215 (4)
H3O0.0703 (9)0.067 (2)0.417 (9)0.032*
O40.11707 (4)0.02696 (12)0.7027 (5)0.0196 (4)
O50.16718 (4)0.10740 (13)0.6111 (6)0.0252 (4)
O60.11934 (5)0.47723 (13)1.1519 (5)0.0220 (4)
O70.05337 (5)0.53129 (13)0.8992 (5)0.0204 (4)
H7O0.0611 (8)0.598 (3)0.987 (9)0.031*
C60.01288 (6)0.21569 (17)0.6846 (6)0.0127 (4)
C70.04618 (7)0.13490 (17)0.6462 (6)0.0128 (4)
H7A0.03800.06380.56280.015*
C80.09153 (6)0.15874 (17)0.7304 (6)0.0133 (4)
C90.10330 (6)0.26321 (18)0.8480 (6)0.0142 (4)
H9A0.13410.27950.90560.017*
C100.07019 (6)0.34410 (18)0.8820 (6)0.0131 (4)
C110.02463 (6)0.32021 (17)0.8012 (6)0.0134 (4)
H11A0.00190.37510.82610.016*
C120.03557 (6)0.18988 (17)0.5860 (6)0.0138 (4)
C130.12794 (6)0.07323 (18)0.6782 (6)0.0150 (4)
C140.08419 (7)0.45642 (18)0.9953 (6)0.0156 (5)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
O10.0143 (7)0.0151 (8)0.0291 (9)0.0021 (6)0.0044 (7)0.0012 (7)
N10.0152 (8)0.0205 (10)0.0185 (9)0.0067 (8)0.0004 (7)0.0002 (8)
C10.0122 (9)0.0270 (12)0.0166 (11)0.0006 (9)0.0006 (8)0.0004 (10)
C20.0142 (9)0.0208 (11)0.0157 (10)0.0018 (8)0.0008 (8)0.0017 (9)
C30.0133 (9)0.0166 (11)0.0135 (10)0.0014 (8)0.0015 (8)0.0005 (9)
C40.0132 (9)0.0180 (11)0.0170 (10)0.0010 (8)0.0016 (8)0.0006 (10)
C50.0190 (10)0.0171 (11)0.0161 (11)0.0012 (8)0.0000 (8)0.0007 (9)
O20.0116 (6)0.0130 (7)0.0299 (9)0.0009 (5)0.0012 (6)0.0000 (7)
O30.0124 (7)0.0138 (8)0.0382 (11)0.0007 (6)0.0073 (7)0.0059 (7)
O40.0122 (6)0.0134 (7)0.0331 (9)0.0017 (6)0.0034 (6)0.0022 (7)
O50.0120 (7)0.0220 (9)0.0417 (11)0.0023 (6)0.0085 (7)0.0032 (8)
O60.0179 (7)0.0204 (8)0.0277 (9)0.0050 (6)0.0047 (7)0.0032 (7)
O70.0179 (8)0.0126 (8)0.0308 (10)0.0003 (6)0.0019 (7)0.0057 (7)
C60.0125 (8)0.0126 (10)0.0130 (9)0.0008 (8)0.0013 (7)0.0010 (8)
C70.0142 (8)0.0112 (10)0.0129 (10)0.0014 (7)0.0007 (7)0.0018 (8)
C80.0128 (9)0.0143 (10)0.0129 (10)0.0005 (8)0.0009 (8)0.0022 (9)
C90.0111 (9)0.0166 (11)0.0150 (10)0.0017 (8)0.0008 (8)0.0002 (9)
C100.0139 (9)0.0136 (10)0.0117 (10)0.0017 (8)0.0003 (8)0.0002 (8)
C110.0139 (9)0.0138 (10)0.0127 (10)0.0024 (8)0.0004 (8)0.0006 (8)
C120.0152 (9)0.0125 (10)0.0137 (10)0.0000 (8)0.0002 (8)0.0009 (9)
C130.0129 (9)0.0159 (11)0.0164 (10)0.0001 (8)0.0000 (8)0.0007 (9)
C140.0139 (9)0.0168 (11)0.0162 (11)0.0012 (8)0.0026 (9)0.0015 (9)
Geometric parameters (Å, º) top
O1—C31.326 (2)O5—C131.249 (2)
O1—H1O0.95 (3)O6—C141.204 (3)
N1—C11.345 (3)O7—C141.332 (3)
N1—C51.348 (3)O7—H7O0.90 (3)
N1—H1N0.98 (3)C6—C111.388 (3)
C1—C21.367 (3)C6—C71.396 (3)
C1—H1A0.9500C6—C121.499 (3)
C2—C31.405 (3)C7—C81.396 (3)
C2—H2A0.9500C7—H7A0.9500
C3—C41.402 (3)C8—C91.389 (3)
C4—C51.369 (3)C8—C131.506 (3)
C4—H4A0.9500C9—C101.391 (3)
C5—H5A0.9500C9—H9A0.9500
O2—C121.224 (2)C10—C111.399 (3)
O3—C121.305 (3)C10—C141.489 (3)
O3—H3O0.93 (3)C11—H11A0.9500
O4—C131.268 (3)
C3—O1—H1O111 (2)C6—C7—C8119.90 (19)
C1—N1—C5121.26 (19)C6—C7—H7A120.1
C1—N1—H1N119.9 (18)C8—C7—H7A120.1
C5—N1—H1N118.7 (18)C9—C8—C7119.70 (18)
N1—C1—C2121.04 (19)C9—C8—C13119.95 (17)
N1—C1—H1A119.5C7—C8—C13120.29 (19)
C2—C1—H1A119.5C8—C9—C10120.39 (18)
C1—C2—C3118.9 (2)C8—C9—H9A119.8
C1—C2—H2A120.6C10—C9—H9A119.8
C3—C2—H2A120.6C9—C10—C11120.1 (2)
O1—C3—C4123.01 (18)C9—C10—C14119.06 (17)
O1—C3—C2118.02 (19)C11—C10—C14120.86 (18)
C4—C3—C2118.97 (19)C6—C11—C10119.51 (18)
C5—C4—C3119.15 (19)C6—C11—H11A120.2
C5—C4—H4A120.4C10—C11—H11A120.2
C3—C4—H4A120.4O2—C12—O3123.40 (18)
N1—C5—C4120.7 (2)O2—C12—C6123.77 (19)
N1—C5—H5A119.7O3—C12—C6112.83 (17)
C4—C5—H5A119.7O5—C13—O4124.62 (19)
C12—O3—H3O117.1 (18)O5—C13—C8116.56 (19)
C14—O7—H7O110.8 (17)O4—C13—C8118.82 (17)
C11—C6—C7120.42 (17)O6—C14—O7124.0 (2)
C11—C6—C12120.09 (17)O6—C14—C10124.07 (19)
C7—C6—C12119.45 (18)O7—C14—C10111.89 (17)
C5—N1—C1—C20.7 (3)C7—C6—C11—C100.3 (3)
N1—C1—C2—C30.7 (3)C12—C6—C11—C10178.11 (19)
C1—C2—C3—O1177.5 (2)C9—C10—C11—C60.5 (3)
C1—C2—C3—C42.1 (3)C14—C10—C11—C6177.9 (2)
O1—C3—C4—C5177.3 (2)C11—C6—C12—O24.8 (4)
C2—C3—C4—C52.2 (3)C7—C6—C12—O2173.0 (2)
C1—N1—C5—C40.5 (3)C11—C6—C12—O3175.4 (2)
C3—C4—C5—N10.9 (3)C7—C6—C12—O36.7 (3)
C11—C6—C7—C80.9 (3)C9—C8—C13—O525.5 (3)
C12—C6—C7—C8178.7 (2)C7—C8—C13—O5151.8 (2)
C6—C7—C8—C90.7 (3)C9—C8—C13—O4154.9 (2)
C6—C7—C8—C13178.04 (19)C7—C8—C13—O427.8 (3)
C7—C8—C9—C100.1 (3)C9—C10—C14—O620.3 (3)
C13—C8—C9—C10177.3 (2)C11—C10—C14—O6161.3 (2)
C8—C9—C10—C110.7 (3)C9—C10—C14—O7159.0 (2)
C8—C9—C10—C14177.74 (19)C11—C10—C14—O719.4 (3)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O1—H1O···O50.95 (3)1.59 (4)2.533 (2)171 (3)
N1—H1N···O4i0.98 (3)1.73 (3)2.700 (2)173 (4)
O3—H3O···O4ii0.93 (3)1.65 (3)2.574 (2)172 (3)
O7—H7O···O2iii0.90 (3)1.79 (3)2.678 (2)166 (3)
Symmetry codes: (i) x+1/2, y+1/2, z1/2; (ii) x, y, z1/2; (iii) x, y+1, z+1/2.
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O1—H1O···O50.95 (3)1.59 (4)2.533 (2)171 (3)
N1—H1N···O4i0.98 (3)1.73 (3)2.700 (2)173 (4)
O3—H3O···O4ii0.93 (3)1.65 (3)2.574 (2)172 (3)
O7—H7O···O2iii0.90 (3)1.79 (3)2.678 (2)166 (3)
Symmetry codes: (i) x+1/2, y+1/2, z1/2; (ii) x, y, z1/2; (iii) x, y+1, z+1/2.
π-stacking interactions within (I) top
InteractionCg···Cg (Å)Cg···perp (Å)
Cg1···Cg1i3.6206 (13)3.4373 (9)
Cg2···Cg2i3.6206 (13)3.3627 (9)
Cg1 is the centroid of the 3,5-dicarboxybenzoate ring, Cg2 is the centroid of the 4-hydroxypyridinium ring [symmetry code: (i) x, y, 1+z], Cg···Cg is the centroid-to-centroid distance, and Cg···perp is the distance to the plane perpendicular to the ring centroid.

Experimental details

Crystal data
Chemical formulaC5H6NO+·C9H5O6
Mr305.24
Crystal system, space groupOrthorhombic, Pna21
Temperature (K)122
a, b, c (Å)29.3465 (10), 12.2113 (5), 3.6206 (2)
V3)1297.47 (10)
Z4
Radiation typeCu Kα
µ (mm1)1.10
Crystal size (mm)0.11 × 0.06 × 0.06
Data collection
DiffractometerBruker APEXII
diffractometer
Absorption correctionNumerical
SADABS (Krause et al., 2015)
Tmin, Tmax0.694, 0.753
No. of measured, independent and
observed [I > 2σ(I)] reflections
6000, 2322, 2172
Rint0.018
(sin θ/λ)max1)0.614
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.028, 0.071, 1.05
No. of reflections2322
No. of parameters213
No. of restraints1
H-atom treatmentH atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å3)0.15, 0.19
Absolute structureFlack x determined using 786 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013)
Absolute structure parameter0.20 (8)

Computer programs: APEX2 (Bruker, 2012), SAINT (Bruker 2012), SHELXS97 (Sheldrick, 2008), SHELXL2014 (Sheldrick, 2015), OLEX2 (Dolomanov et al., 2009), Mercury (Macrae et al., 2008) and POVRay (Cason, 2003), publCIF (Westrip, 2010) and PLATON (Spek, 2009).

 

Acknowledgements

We thank the University of Notre Dame for generous support of the micro-focus source used in this project. SLS thanks the Indiana Academy of Science for a Junior Research Grant and the Henderson lab for kind donation of materials and research space.

References

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Volume 71| Part 7| July 2015| Pages 861-863
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