Journal of Applied Crystallography

Volume 36, Part 2 (April 2003)



HTML versionpdf versionsupplementary materialssimilar papers buy article online

J. Appl. Cryst. (2003). 36, 193-205    [doi:10.1107/S0021889802022100]

A procedure towards the automatic solution of crystal structures by means of topological analysis of Fourier maps

A. Menéndez-Velázquez and S. García-Granda

Abstract: The last step of a crystal structure determination that requires human intervention is the interpretation of Fourier maps, displayed as peaks in a favourable projection. Crystallographers infer bonding by empirically assigning bonds between peaks via purely geometrical criteria. In this paper, a network connecting peaks and passes of the density function is suggested in order to avoid human intervention and bonding inference. A completely automatic algorithm for the full analysis of critical points and recognition of the molecular graph in Fourier maps has been developed and implemented into the package DIRDIF. This procedure has been applied successfully to a wide variety of crystal structures. In most cases, the complete structure is recovered and the connectivity matrix is constructed without any user intervention.

Online 15 March 2003


pdfdisplay filedownload file

PDF file (21.4 kbytes)
Supplementary material


Notes:

To open or display or play some files, you may need to set your browser up to use the appropriate software. See the full list of file types for an explanation of the different file types and their related mime types and, where available links to sites from where the appropriate software may be obtained.

The download button will force most browsers to prompt for a file name to store the data on your hard disk.

Where possible, images are represented by thumbnails.


Copyright © International Union of Crystallography
IUCr Webmaster