research papers
Structures of (S)-(−)-4-oxo-2-azetidinecarboxylic acid and 3-azetidinecarboxylic acid from powder synchrotron diffraction data
aDepartamento de Química, Facultad de Ciencias, Universidad de Los Andes, Mérida 5101, Venezuela, bEuropean Synchrotron Radiation Facility, BP220, F-38043 Grenoble CEDEX, France, and cDepartment of Chemistry, Keele University, Staffordshire ST5 5BG, England
*Correspondence e-mail: asiloe@ula.ve
The crystal structures of the four-membered heterocycles (S)-(−)-4-oxo-2-azetidinecarboxylic acid (I) and 3-azetidinecarboxylic acid (II) were solved by using powder synchrotron X-ray diffraction data. The asymmetry of the oxoazetidine and azetidine rings is discussed, along with the hydrogen bonding.
Keywords: powder diffraction; structural solution; heterocycles; antibiotics; asymmetry; hydrogen bonding.
1. Introduction
(S)-4-(−)-Oxo-2-azetidinecarboxylic acid (I) and 3-azadinecarboxylic acid (II) are strained four-membered heterocycles, difficult to synthesize owing to unfavorable enthalpies of activation (Huszthy et al., 1993). Compound (I) is an optically active β-lactam derivative of L-aspartic acid, which can be prepared by hydrogenation from (S)-4-(−)-benzyloxycarbonyl-2-azetidinone (Fritz et al., 1986), and by oxidation of 4-vinyl-2-azetidinone (Pietsch, 1976). Derivatives of (I) are of potential interest as precursors to β-lactam antibiotics, since they can be converted into 4-acetoxy-2-azetidinones. These compounds have been recognized as the most useful precursors for the synthesis of carbapenems (Nagao, Kumagai et al., 1992; Nagao, Nagase, Kumagai, Kuramoto et al., 1992; Nagao, Nagase, Kumagai, Matsunaga et al., 1992), powerful antibiotics widely used in the pharmaceutical industry. Optically active monosubtituted alkoxycarbonyl derivatives of (I) yield helical poly β-peptides by anionic (López-Carrasquero et al., 1994). The helical conformations adopted by these polyaspartates are similar to the α-helix of and proteins, and they display piezoelectric and properties (López-Carrasquero et al., 1995; Prieto et al., 1989; Muñoz-Guerra et al., 2002). The propensity for cleavage of the amide bonds has been acknowledged, and, for instance, this feature has been used in the synthesis of a linear polyamide with hydroxymethyl pendant by the selective reduction of the 2-azetidinone moiety in the polymer main chain (Sudo et al., 2001). Compound (II) corresponds to a group of amino acids whose biological activity has been widely recognized. For example, the naturally occurring L-(2)-azetidinecarboxylic acid is homologous to proline (Berman et al., 1969) and mugineic acid regulates the iron intake in graminaseous plants (Ma & Nomoto, 1996; Mino et al., 1983). On the other hand, many efforts have been directed towards the development of conformationally constrained analogs of essential animoacids (Hanessian et al., 1999) and peptidomimetics (Alonso et al., 2001) that display more favorable pharmaceutical properties. Here we report the structures of two compounds with prospective applications in those fields. The crystal structures were solved from powder diffraction data and will be discussed in the light of 6–31+G(d) GAUSSIAN94 (Frisch et al., 1995) geometrical optimizations and the formation of hydrogen bonds.
2. Experimental
2.1. Synthesis of (S)-(−)-4-oxo-2-azetidinecarboxylic acid (I)
(S)-4-Benzyloxycarbonyl-2-azetidinone was prepared as the starting material from L-aspartic acid (Aldrich, 98+%, [a]D25 = +25) according to literature methods (Rodríguez-Galán et al., 1986). In a PARR hydrogenator, 1 g (4.9 mmol) of (S)-4-(−)-benzyloxycarbonyl-2-azetidinone dissolved in 20 ml of i-propanol was hydrogenated over Pd/C to 5% (86 mg) at room temperature and 1.5 atm for 15 to 20 min. After this time, the catalyst was filtered from the solution and most of the solvent evaporated. Hexane was added to the residual mixture, which was allowed to crystallize at room temperature. The (S)-(−)-4-oxo-2-azetidinecarboxylic acid yield was 0.48 g (85%), m.p. 375–377 K Lit. (Frits) 375–377 K. IR (KBr): 3339, 1747, 1729, 1211, 1196, 1166 cm−1. 1H NMR (in DMSO-d6) δ(p.p.m.): 7.5 (br, 1HNH); 4.2 (dd, 1H, CHNH), 3.3 (ddd, 1H, CH2CO), 3.0 (ddd, 1H, CH2CO). [α]D20 = −80°; c = 1 in water (Fritz et al., 1986).
2.2. Powder data collection
X-ray powder diffraction data were collected with the high-resolution X-ray powder diffractometer on beamline BM16 at ESRF (Fitch, 2004), selecting X-rays from the white bending magnet source with wavelengths of 0.84933 (1) and 0.54021 (1) Å for (I) and (II), respectively. Small quantities of (I) and (II) (Aldrich, 98%) were lightly ground with a pestle in an agate mortar and introduced into 1.5 mm diameter borosilicate glass capillaries, mounted on the axis of the diffractometer and spun during measurements. Data were collected for several hours and normalized against monitor counts and detector efficiencies, and rebinned into steps of 2θ = 0.003°.
3. Results
3.1. Structural solution and refinement
The diffraction pattern of the β-lactam (I) was indexed in an orthorhombic cell with a = 8.9468 (2), b = 7.66956 (2) and c = 7.27555 (2) Å (refined values) [DICVOL91 (Boultif & Louër, 1991), with indexing figures of merit: M(20) = 60.0 (de Wolff, 1968) and F(20) = 281.1 (Smith & Snyder, 1979)]. Evaluation of the in the diffraction pattern indicated the P212121 (No. 19), with Z = 4. The pattern decomposition using the Le Bail method (LeBail et al., 1988) and the solution via were obtained using the program EXPO (Altomare et al., 1999). The azetidinecarboxylic acid (II) was also obtained as a pure phase and its powder diffraction pattern was indexed by a monoclinic cell: a = 6.27985 (3), b = 7.8310 (1), c = 5.46296 (3) Å and β = 114.893 (1)° (refined values) [DICVOL91 (Boultif & Louër, 1991), with indexing figures of merit: M(20) = 75.8 (de Wolff, 1968) and F(20) = 390.4 (Smith & Snyder, 1979)]. Analysis of gave two possible space groups: P21 (No. 4) and P21/m (No. 11). Statistical analysis of the reflection intensities distribution performed by the EXPO suite of programs (Altomare et al., 1999) ruled out the centrosymmetric and running the routine of EXPO in default mode in the P21 cell gave as the best solution the positions of all the non-H atoms. Both models were completed placing the H atoms with the sketching facilities of MATERIALS STUDIO (Accelrys Inc., 2001). Rietveld (1969) of the structures were performed with the program GSAS (Larson & Von Dreele, 2001).
For lactam (I), data in the 2θ range 7–43° were included, comprising 218 Bragg reflections, which were modeled using a pseudo-Voigt peak-shape function (Thompson et al., 1987). This function included the axial divergence asymmetry correction at low angle (Finger et al., 1994). The background was described by the automatic interpolation of 20 points throughout the whole pattern. In order to place the appropriate bond and angle restraints on the model, a search of the Cambridge Crystallographic Database (CSD; Allen, 2002) was performed and five 2-acetidinone fragments were found (FEPNAP, EABLEY, FEHWOE, REPLON and VUJHOX). No regular pattern of asymmetry in the four-membered rings could be recognized since distances and bond angles varied depending on the substitute groups. Therefore, it was considered more accurate to restrain the model using the bond lengths and angles obtained in an ab initio molecular-orbital optimization of (I), using GAUSSIAN94 (Frisch et al., 1995 with a 6–31 +G(d) basis set. Bond and angle restraints were weighted by 0.05 Å and 5.00°, respectively. H atoms were refined with C—H, N—H and O—H distances restrained to be 0.99 Å (weighted 0.05 Å). The isotropic displacement parameters for all H atoms were refined individually. The of 73 parameters yielded final agreement factors: Rwp = 0.0861 and Rexp = 0.0308.
For the structure of compound (II), 295 reflections were refined following the procedure described above. Detailed crystallographic information and final .1 Fig. 1 shows the final Rietveld plots for the β-lactam (I) and the azetidinecarboxylic acid (II), respectively.
agreement factors for both structures are summarized in Table 14. Discussion
Fig. 2 shows the and atom-labeling scheme for both compounds. Table 2 depicts the selected bond distances, angles and torsion angles for (I) and (II) compared with those obtained by theoretical ab initio calculations. The carboxylic O2—C3 and O3—C3 bond distances in the β-lactam (I) are markedly different, while those distances are equal within 5σ in the 3-azedinecarboxylic acid (II). These results are clear evidence that at room temperature compound (I) is a neutral species, while compound (II) is a zwitterion. The β-lactam ring in (I) is highly asymmetrical owing to the chiral environment around N1 (see bond distances N1—C1, N1—C3, C2—C3 and C1—C2, and related angles) and flat with maximum deviations of ±0.013 Å from the mean plane. This planarity is promoted by the sp2 states of C3 and N1. O1 lies close to the β-lactam plane at 0.039 Å, while C4 is out of the plane by 1.176 Å. In contrast, the azetidine ring in (II) is almost symmetrical (see bond distances N1—C3, N1—C2, C1—C2 and C1—C3, and related angles), with a pseudo-mirror plane passing through N1 and C1 atoms, due mainly to the acidic substitution in C1, opposite to N1. The azetidine ring is also planar with maximum deviations of −0.018 and +0.017 Å from the mean plane. In this case, C4 is out of the plane by 1.272 Å. The orientation of the carboxylic acid with respect to the ring in both structures can be explored by means of torsion angles about the C1—C4 bond. In the β-lactam (I), torsion angles N1—C1—C4—O3 −5.63 and N1—C1—C4—O2 177.25° indicate that the bonds C4—O3 and C4—O2 are aligned with the C1—N1 bond of the ring. In the 3-azetidinecarboxylic acid (II), O1 and O2 are positioned almost symmetrically with respect to the ring, being part of the pseudo-mirror plane passing through N1—C1, as depicted by the torsion angles C3—C1—C4—O1 146, C2—C1—C4—O2 −134, C3—C1—C4—O2 −39.8 and C2—C1—C4—O1 −52.4°.
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The slightly slacker constraints applied to the geometry of the 4-atom rings allowed them to reach the geometry that best fitted the diffraction data. In this regard, both compounds displayed the same asymmetry pattern shown by the theoretically calculated molecules. However, a closer analysis of the theoretical and X-ray diffraction distances of Table 2 show that for the β-lactam (I) there is an elongation of ca 0.03 Å of the C1—N1 and C1—C2 distances nearer to the pendant carboxylic acid group at C1, which also shows a C1—C4 distance longer than that calculated by 0.036 Å. This could be associated with the librational thermal motion of the molecule. In the case of (II) this elongation is only observed in the C1—C4 bond of the carboxylate group pending group. This thermal motion cannot be modeled from powder diffraction data due to the well known limitations arising from the overlap of reflections, particularly at higher diffraction angles.
Hydrogen bonds for both compounds are summarized in Table 3. In the β-lactam (I), a supramolecular bidimensional structure is recognized, as shown in Fig. 3. Extended chains constructed with strong O2—H5⋯O1 hydrogen bonds run parallel to [010]. Additional N1—H4⋯O3 hydrogen bonds link neighboring chains laterally forming ribbons also running parallel to [010]. As observed in previous studies (Mora et al., 2005), the four hydrogen-bond acceptor capacity of the carboxylic acid is completed by means of two weak C2—H2⋯O3 and C2—H3⋯O1 hydrogen bonds. Hydrogen bonding in the 3-azetidinecarboxylic acid (II) is markedly different because of its zwitterionic characters, which makes the amine group in the ring a double donor of H atoms. In fact, a two-dimensional network of hydrogen bonds is assembled by the combination of two motifs: infinite two-membered zigzag chains connected by N1—H6⋯O1 hydrogen bonds running along b, and infinite one-membered chains running along [101] connected by a bifurcated hydrogen bond N1—H7⋯O1 and N1—H7⋯O2. A perspective view of this hydrogen-bond network is shown in Fig. 4. In addition, some weak C—H⋯O hydrogen bonds are also present, which saturates the acceptor capacity of the carboxylate group.
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Supporting information
10.1107/S0108768106013887/av5050sup1.cif
contains datablocks global, II, I. DOI:Rietveld powder data: contains datablock I. DOI: 10.1107/S0108768106013887/av5050Isup2.rtv
Rietveld powder data: contains datablock II. DOI: 10.1107/S0108768106013887/av5050IIsup4.rtv
Structure factors: contains datablock I. DOI: 10.1107/S0108768106013887/av5050Isup3.hkl
Structure factors: contains datablock II. DOI: 10.1107/S0108768106013887/av5050IIsup5.hkl
Program(s) used to solve structure: EXPO-SIRPOW for (I). For both compounds, program(s) used to refine structure: GSAS.
C4H5NO3 | Z = 4 |
Mr = 114.68 | Synchrotron radiation, λ = 0.84933 Å |
Orthorhombic, P212121 | µ = 0.16 mm−1 |
a = 8.94684 (2) Å | T = 295 K |
b = 7.66956 (2) Å | Particle morphology: thin powder |
c = 7.27555 (2) Å | white |
V = 499.24 (1) Å3 | cylinder, 40.0 × 1.5 mm |
Beam line ID31, ESRF, Grenoble-France. diffractometer | Data collection mode: transmission |
Radiation source: ESRF Beam line ID31 | 2θmin = 7.003°, 2θmax = 43.033°, 2θstep = 0.003° |
Specimen mounting: borosilicate glass capillary |
Least-squares matrix: full | 12011 data points |
Rp = 0.059 | Profile function: CW Profile function number 3 with 19 terms Pseudovoigt profile coefficients as parameterized in P. Thompson, D.E. Cox & J.B. Hastings (1987). J. Appl. Cryst.,20,79-83. Asymmetry correction of L.W. Finger, D.E. Cox & A. P. Jephcoat (1994). J. Appl. Cryst.,27,892-900. #1(GU) = 0.000 #2(GV) = 0.659 #3(GW) = 0.000 #4(GP) = 0.000 #5(LX) = 0.545 #6(LY) = 6.413 #7(S/L) = 0.0053 #8(H/L) = 0.0063 #9(trns) = 0.00 #10(shft)= 0.0000 #11(stec)= 0.00 #12(ptec)= 0.00 #13(sfec)= 0.00 #14(L11) = 0.000 #15(L22) = 0.000 #16(L33) = 0.000 #17(L12) = 0.000 #18(L13) = 0.000 #19(L23) = 0.000 Peak tails are ignored where the intensity is below 0.0010 times the peak Aniso. broadening axis 0.0 0.0 1.0 |
Rwp = 0.086 | 76 parameters |
Rexp = 0.031 | 13 restraints |
R(F2) = 0.08040 | (Δ/σ)max = 0.92 |
χ2 = 7.896 | Background function: GSAS Background function number 7 with 20 terms. Linear interpolation 1: 89.2903 2: 117.828 3: 203.054 4: 255.872 5: 150.869 6: 118.959 7: 106.592 8: 92.2366 9: 87.6108 10: 84.9423 11: 80.9489 12: 77.4853 13: 80.0713 14: 77.2083 15: 76.7130 16: 75.0173 17: 72.2292 18: 69.7666 19: 70.6371 20: 62.0150 |
C4H5NO3 | V = 499.24 (1) Å3 |
Mr = 114.68 | Z = 4 |
Orthorhombic, P212121 | Synchrotron radiation, λ = 0.84933 Å |
a = 8.94684 (2) Å | µ = 0.16 mm−1 |
b = 7.66956 (2) Å | T = 295 K |
c = 7.27555 (2) Å | cylinder, 40.0 × 1.5 mm |
Beam line ID31, ESRF, Grenoble-France. diffractometer | Data collection mode: transmission |
Specimen mounting: borosilicate glass capillary | 2θmin = 7.003°, 2θmax = 43.033°, 2θstep = 0.003° |
Rp = 0.059 | 12011 data points |
Rwp = 0.086 | 76 parameters |
Rexp = 0.031 | 13 restraints |
R(F2) = 0.08040 | (Δ/σ)max = 0.92 |
χ2 = 7.896 |
x | y | z | Uiso*/Ueq | ||
C1 | 0.1999 (3) | 0.3180 (4) | 0.4980 (4) | 0.0367 (15)* | |
N1 | 0.1261 (3) | 0.1666 (3) | 0.5866 (4) | 0.0436 (11)* | |
C3 | 0.1237 (3) | 0.0664 (4) | 0.4294 (5) | 0.0629 (16)* | |
C4 | 0.1158 (3) | 0.4943 (4) | 0.4970 (4) | 0.0374 (14)* | |
O1 | 0.0783 (2) | −0.0787 (3) | 0.4139 (3) | 0.0679 (10)* | |
O2 | 0.1926 (2) | 0.6135 (3) | 0.4067 (3) | 0.0456 (8)* | |
O3 | −0.0011 (2) | 0.5128 (3) | 0.5778 (3) | 0.0461 (8)* | |
C2 | 0.1954 (4) | 0.2126 (4) | 0.3106 (4) | 0.0378 (15)* | |
H1 | 0.307 (2) | 0.347 (3) | 0.542 (3) | 0.06* | |
H2 | 0.312 (2) | 0.191 (3) | 0.269 (2) | 0.06* | |
H3 | 0.133 (2) | 0.263 (3) | 0.180 (3) | 0.06* | |
H4 | 0.098 (2) | 0.184 (3) | 0.725 (2) | 0.06* | |
H5 | 0.112 (4) | 0.697 (5) | 0.402 (5) | 0.06* |
C1—N1 | 1.483 (4) | O1—H5i | 1.75 (4) |
C1—C3 | 2.106 (4) | O2—C4 | 1.319 (4) |
C1—C4 | 1.548 (4) | O2—H5 | 0.96 (4) |
C1—C2 | 1.585 (4) | O3—C4 | 1.208 (4) |
C1—H1 | 1.034 (19) | C2—C1 | 1.585 (4) |
N1—C1 | 1.483 (4) | C2—N1 | 2.131 (4) |
N1—C3 | 1.378 (4) | C2—C3 | 1.554 (5) |
N1—C2 | 2.131 (4) | C2—H2 | 1.10 (2) |
N1—H4 | 1.049 (18) | C2—H3 | 1.17 (2) |
C3—C1 | 2.106 (4) | H1—C1 | 1.034 (19) |
C3—N1 | 1.378 (4) | H1—C4 | 2.076 (19) |
C3—O1 | 1.190 (4) | H2—C2 | 1.10 (2) |
C3—C2 | 1.554 (5) | H2—H3 | 1.82 (3) |
C4—C1 | 1.548 (4) | H3—C2 | 1.17 (2) |
C4—O2 | 1.319 (4) | H3—H2 | 1.82 (3) |
C4—O3 | 1.208 (4) | H4—N1 | 1.049 (18) |
C4—H1 | 2.076 (19) | H5—C4 | 1.70 (4) |
C4—H5 | 1.70 (4) | H5—O1ii | 1.75 (4) |
O1—C3 | 1.190 (4) | H5—O2 | 0.96 (4) |
N1—C1—C4 | 118.0 (2) | O1—C3—C2 | 139.7 (3) |
N1—C1—C2 | 87.9 (2) | C1—C4—O2 | 110.8 (3) |
N1—C1—H1 | 116.5 (11) | C1—C4—O3 | 121.4 (3) |
C4—C1—C2 | 115.4 (2) | O2—C4—O3 | 127.7 (3) |
C4—C1—H1 | 105.3 (11) | C4—O2—H5 | 95 (2) |
C2—C1—H1 | 113.5 (11) | C1—C2—C3 | 84.3 (2) |
C1—N1—C3 | 94.7 (2) | C1—C2—H2 | 106.8 (10) |
C1—N1—H4 | 115.1 (14) | C1—C2—H3 | 122.9 (11) |
C3—N1—H4 | 150.1 (14) | C3—C2—H2 | 115.9 (12) |
N1—C3—O1 | 127.3 (3) | C3—C2—H3 | 119.4 (11) |
N1—C3—C2 | 93.0 (2) | H2—C2—H3 | 106.4 (14) |
Symmetry codes: (i) x, y−1, z; (ii) x, y+1, z. |
C4H7NO2 | Z = 2 |
Mr = 101.10 | Synchrotron radiation, λ = 0.540211 Å |
Monoclinic, P21 | µ = 0.07 mm−1 |
a = 6.27983 (3) Å | T = 295 K |
b = 7.83799 (4) Å | Particle morphology: thin powder |
c = 5.46295 (3) Å | white |
β = 114.8925 (4)° | cylinder, 40.0 × 1.5 mm |
V = 243.91 (1) Å3 | Specimen preparation: Prepared at RT K |
Beam line ID31, ESRF, Grenoble, France diffractometer | Data collection mode: transmission |
Specimen mounting: borosilicate glass capillary | 2θmin = 5.005°, 2θmax = 32.002°, 2θstep = 0.003° |
Least-squares matrix: full | 9000 data points |
Rp = 0.059 | Profile function: CW Profile function number 3 with 19 terms Pseudovoigt profile coefficients as parameterized in P. Thompson, D.E. Cox & J.B. Hastings (1987). J. Appl. Cryst.,20,79-83. Asymmetry correction of L.W. Finger, D.E. Cox & A. P. Jephcoat (1994). J. Appl. Cryst.,27,892-900. #1(GU) = 0.000 #2(GV) = 0.000 #3(GW) = 0.000 #4(GP) = 0.000 #5(LX) = 0.039 #6(LY) = 10.455 #7(S/L) = 0.0050 #8(H/L) = 0.0060 #9(trns) = 0.00 #10(shft)= 0.0000 #11(stec)= -7.74 #12(ptec)= 0.00 #13(sfec)= 0.00 #14(L11) = -0.031 #15(L22) = 0.143 #16(L33) = 0.400 #17(L12) = 0.000 #18(L13) = 0.000 #19(L23) = 0.086 Peak tails are ignored where the intensity is below 0.0100 times the peak Aniso. broadening axis 0.0 0.0 1.0 |
Rwp = 0.072 | 85 parameters |
Rexp = 0.038 | 38 restraints |
R(F2) = 0.13777 | (Δ/σ)max = 1.66 |
χ2 = 3.725 | Background function: GSAS Background function number 7 with 15 terms. Linear interpolation 1: 66.4043 2: 164.150 3: 128.433 4: 76.1305 5: 56.4020 6: 56.2399 7: 56.5216 8: 52.6717 9: 55.3696 10: 57.9681 11: 57.0144 12: 55.4734 13: 41.7283 14: 37.5888 15: 37.2598 |
C4H7NO2 | V = 243.91 (1) Å3 |
Mr = 101.10 | Z = 2 |
Monoclinic, P21 | Synchrotron radiation, λ = 0.540211 Å |
a = 6.27983 (3) Å | µ = 0.07 mm−1 |
b = 7.83799 (4) Å | T = 295 K |
c = 5.46295 (3) Å | cylinder, 40.0 × 1.5 mm |
β = 114.8925 (4)° |
Beam line ID31, ESRF, Grenoble, France diffractometer | Data collection mode: transmission |
Specimen mounting: borosilicate glass capillary | 2θmin = 5.005°, 2θmax = 32.002°, 2θstep = 0.003° |
Rp = 0.059 | 9000 data points |
Rwp = 0.072 | 85 parameters |
Rexp = 0.038 | 38 restraints |
R(F2) = 0.13777 | (Δ/σ)max = 1.66 |
χ2 = 3.725 |
x | y | z | Uiso*/Ueq | ||
C1 | 0.3589 (7) | 0.130 (2) | −0.3240 (9) | 0.0269 (15)* | |
C2 | 0.2951 (7) | 0.1542 (5) | −0.6287 (8) | 0.0318 (18)* | |
C3 | 0.1901 (7) | 0.2807 (5) | −0.3652 (8) | 0.0286 (16)* | |
C4 | 0.6206 (7) | 0.1703 (5) | −0.1408 (9) | 0.0227 (18)* | |
O1 | 0.7716 (5) | 0.0960 (4) | −0.1992 (5) | 0.0318 (10)* | |
O2 | 0.6581 (5) | 0.2606 (3) | 0.0591 (5) | 0.0312 (9)* | |
N1 | 0.1300 (6) | 0.2916 (4) | −0.6541 (7) | 0.0294 (12)* | |
H1 | 0.309 (5) | 0.0071 (7) | −0.295 (7) | 0.024 (14)* | |
H2 | 0.394 (4) | 0.2032 (7) | −0.723 (6) | 0.020 (14)* | |
H3 | 0.276 (6) | 0.0361 (7) | −0.712 (6) | 0.028 (14)* | |
H4 | 0.265 (4) | 0.3801 (7) | −0.266 (7) | 0.029 (13)* | |
H5 | 0.043 (4) | 0.2420 (7) | −0.326 (5) | 0.024 (12)* | |
H6 | 0.166 (5) | 0.4159 (7) | −0.714 (8) | 0.022 (13)* | |
H7 | −0.048 (4) | 0.2729 (7) | −0.761 (6) | 0.031 (12)* |
C1—C2 | 1.551 (7) | N1—C2 | 1.460 (5) |
C1—C3 | 1.542 (14) | N1—C3 | 1.462 (6) |
C1—C4 | 1.556 (6) | N1—H2 | 1.97 (3) |
C1—N1 | 2.179 (10) | N1—H4 | 2.05 (3) |
C1—H1 | 1.04 (2) | N1—H6 | 1.08 (2) |
C1—H3 | 2.09 (3) | N1—H7 | 1.03 (2) |
C2—C1 | 1.551 (7) | H1—C1 | 1.04 (2) |
C2—C3 | 2.071 (7) | H2—C2 | 1.03 (3) |
C2—N1 | 1.460 (5) | H2—N1 | 1.97 (3) |
C2—H2 | 1.03 (3) | H2—H3 | 1.52 (3) |
C2—H3 | 1.015 (16) | H3—C1 | 2.09 (3) |
C3—C1 | 1.542 (14) | H3—C2 | 1.015 (16) |
C3—C2 | 2.071 (7) | H3—H2 | 1.52 (3) |
C3—N1 | 1.462 (6) | H4—C3 | 0.953 (17) |
C3—H4 | 0.953 (17) | H4—N1 | 2.05 (3) |
C3—H5 | 1.07 (3) | H4—H5 | 1.68 (3) |
C3—H7 | 2.05 (3) | H5—C3 | 1.07 (3) |
C4—C1 | 1.556 (6) | H5—H4 | 1.68 (3) |
C4—O1 | 1.263 (6) | H6—O1iii | 1.59 (2) |
C4—O2 | 1.238 (5) | H6—N1 | 1.08 (2) |
O1—C4 | 1.263 (6) | H6—H7 | 1.69 (3) |
O1—H6i | 1.59 (2) | H7—C3 | 2.05 (3) |
O2—C4 | 1.238 (5) | H7—O2iv | 1.69 (2) |
O2—H7ii | 1.69 (2) | H7—N1 | 1.03 (2) |
N1—C1 | 2.179 (10) | H7—H6 | 1.69 (3) |
C2—C1—C3 | 84.1 (6) | N1—C3—H5 | 112.2 (13) |
C2—C1—C4 | 113.0 (5) | H4—C3—H5 | 112 (3) |
C2—C1—H1 | 109 (2) | C1—C4—O1 | 116.4 (5) |
C3—C1—C4 | 114.3 (10) | C1—C4—O2 | 116.2 (5) |
C3—C1—H1 | 119.7 (18) | O1—C4—O2 | 127.0 (3) |
C4—C1—H1 | 113.4 (16) | C4—O1—H6i | 142.2 (13) |
C1—C2—N1 | 92.6 (6) | C2—N1—C3 | 90.2 (3) |
C1—C2—H2 | 130.2 (13) | C2—N1—H6 | 117.6 (19) |
C1—C2—H3 | 107.1 (19) | C2—N1—H7 | 120.5 (8) |
N1—C2—H2 | 103.2 (9) | C3—N1—H6 | 113 (2) |
N1—C2—H3 | 133.1 (18) | C3—N1—H7 | 109 (2) |
H2—C2—H3 | 96 (3) | H6—N1—H7 | 105.7 (17) |
C1—C3—N1 | 93.0 (3) | C2—H2—H3 | 41.7 (15) |
C1—C3—H4 | 113.7 (14) | C2—H3—H2 | 42.6 (15) |
C1—C3—H5 | 110.4 (7) | O1iii—H6—N1 | 178 (3) |
N1—C3—H4 | 114 (2) |
Symmetry codes: (i) −x+1, y−1/2, −z−1; (ii) x+1, y, z+1; (iii) −x+1, y+1/2, −z−1; (iv) x−1, y, z−1. |
Experimental details
(I) | (II) | |
Crystal data | ||
Chemical formula | C4H5NO3 | C4H7NO2 |
Mr | 114.68 | 101.10 |
Crystal system, space group | Orthorhombic, P212121 | Monoclinic, P21 |
Temperature (K) | 295 | 295 |
a, b, c (Å) | 8.94684 (2), 7.66956 (2), 7.27555 (2) | 6.27983 (3), 7.83799 (4), 5.46295 (3) |
α, β, γ (°) | 90, 90, 90 | 90, 114.8925 (4), 90 |
V (Å3) | 499.24 (1) | 243.91 (1) |
Z | 4 | 2 |
Radiation type | Synchrotron, λ = 0.84933 Å | Synchrotron, λ = 0.540211 Å |
µ (mm−1) | 0.16 | 0.07 |
Specimen shape, size (mm) | Cylinder, 40.0 × 1.5 | Cylinder, 40.0 × 1.5 |
Data collection | ||
Data collection method | Beam line ID31, ESRF, Grenoble-France. | Beam line ID31, ESRF, Grenoble, France |
Specimen mounting | Borosilicate glass capillary | Borosilicate glass capillary |
Data collection mode | Transmission | Transmission |
Scan method | ? | ? |
Absorption correction | ? GSAS Absorption/surface roughness correction: function number 0 No correction is applied. | – |
Tmin, Tmax | 1.000, 1.000 | – |
2θ values (°) | 2θmin = 7.003 2θmax = 43.033 2θstep = 0.003 | 2θmin = 5.005 2θmax = 32.002 2θstep = 0.003 |
Refinement | ||
R factors and goodness of fit | Rp = 0.059, Rwp = 0.086, Rexp = 0.031, R(F2) = 0.08040, χ2 = 7.896 | Rp = 0.059, Rwp = 0.072, Rexp = 0.038, R(F2) = 0.13777, χ2 = 3.725 |
No. of data points | 12011 | 9000 |
No. of parameters | 76 | 85 |
No. of restraints | 13 | 38 |
(Δ/σ)max | 0.92 | 1.66 |
Computer programs: EXPO-SIRPOW, GSAS.
Acknowledgements
We thank the ESRF for providing synchrotron radiation beam-time, FONACIT–Venezuela and CDCHT-ULA (Grants C-990-99-08-AA and C1246-04-08A).
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