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Figure 7
Superposition of PDB chain 1kn0:A (Kagawa et al., 2002BB23) with best-matching SCOP domains, as suggested by (a) Q score (d1di2a_) (b) RMSD (d1emn_1) (c) [N_{\rm align}] (d1elxb_) (d) Z score (d1qmca_). Khaki/orange: unmatched/matched parts of 1kn0:A ; dark green/green: unmatched/matched parts of the SCOP domains. The achieved scores are presented in Table 2[link]. The hits are chosen from a total of 33 588 found by SSM in the course of matching with pSSE = 15% SSE similarity threshold. The pictures were obtained using MOLSCRIPT (Kraulis, 1991BB27) and Raster3d (Merritt & Bacon, 1997BB34) software.

Journal logoBIOLOGICAL
ISSN: 1399-0047
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