Figure 8
Correlations between (a) Q score [equation (8) ] and sequence identity [SI; equation (14) ], (b) SI and normalized alignment length [Nm; equation (13) ], (c) RMSD and SI, and (d) RMSD and Nm, represented as contour maps of the reduced density of probability [equation (15) ] of obtaining three-dimensional alignments with the corresponding scores in `all-to-all' alignment of all chains found in PDB. The outermost contours correspond to the level of 0.05 of the maximum. |