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Figure 4
Shape-strain energy required to align fitted and target conformations versus energy difference between docked and relaxed ligands. Plots (a) and (b) were obtained with analytical gradients of potential (1)[link] via equation (3)[link] with one and five Gaussians per atom, respectively. The data in plot (c) were obtained with a target shape density (7)[link] represented by grid representations at 0.25 Å spacing.

Journal logoBIOLOGICAL
CRYSTALLOGRAPHY
ISSN: 1399-0047
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