EMatch: an efficient method for aligning atomic resolution subunits into intermediate-resolution cryo-EM maps of large macromolecular assemblies

Dror, O.; Lasker, K.; Nussinov, R.; Wolfson, H.

doi:10.1107/S0907444906041059

Acta Crystallographica Section D
Acta Crystallographica
Section D BIOLOGICAL CRYSTALLOGRAPHY

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Figure 1
EMatch flow. The strategy of EMatch consists of three stages. In the first stage, helices are identified in a given cryo-EM map of a protein complex. Their spatial arrangement is then used to query a data set of atomic resolution folds to find potential structural homologues of domains appearing in the map. In the final stage, which is currently under development, the potential atomic structural homologues of the domains are assembled into a quasi-model of the complex.

BIOLOGICAL
CRYSTALLOGRAPHY

ISSN: 1399-0047

Volume 63| Part 1| December 2007| Pages 42-49

doi:10.1107/S0907444906041059

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