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Figure 1
An Argand diagram illustrating the structure factor of a reflection with significant anomalous scattering contribution. The brown vector represents the contribution of normally scattering atoms, FN; the red and purple vectors relate the normal, FA, FA′, and anomalous, ±FA′′, contributions of the anomalously scattering substructure for two Friedel mates; the two black vectors show the total structure factors for each of the Friedel mates, FT+ and FT; the blue vector shows the total average structure factor FT. In the SAD experiment only the amplitudes (lengths) of FT+ and FT are available (the ends of black vectors must lie on the circles of appropriate radii), but if the anomalous substructure is known, the size and orientation of the red/purple vectors can be calculated. The purple ±FA′′ vectors must end up on the corresponding circles. To calculate the electron-density map, the total structure factor should be used, with amplitude |FT| ≃ (|FT+| + |FT|)/2 and phase φT.

Journal logoBIOLOGICAL
CRYSTALLOGRAPHY
ISSN: 1399-0047
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