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Figure 3
Speedup of the trypsin example (full mode) relative to execution on a single CPU (total time 41 min 30 s). Timings are single measurements performed on a 64-CPU machine. Parallel jobs were run on separate threads. Speedup factors were not corrected for the input-processing (including anisotropic scaling) and job-startup overhead.

Journal logoBIOLOGICAL
ISSN: 1399-0047
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