Figure 4
The relative positions of Glu84 and Arg86 of CaM and an arginine from a ligand peptide. (a) When swinging in to interact with the backbone, the two residues in the two crystal forms reach towards the same position: the helical groove between residues 79–80 and 83–84. (b) The complex between CaM and a peptide from DAP kinase (de Diego et al., 2010; PDB entry 1yr5
) shows an interaction between the backbone of the disrupted helix, including Thr79, and the side chain of Arg317 from the peptide. A salt bridge is also present between Glu84 and this arginine residue, while Arg86 is far away from the peptide and in fact interacts with Tyr138. (c) A comparison between the bent conformation (grey; central linker in orange) and the fully collapsed peptide complex (green; central linker in pink) shows that the bending region corresponds to that required for complex formation. In both structures, an arginine residue interacts with the unfolded central helix backbone. |