Figure 2
Box-and-whisker plots of the Z-scores characterizing ZnCys3His1 complexes in PDB_REDO with Zen remediation (blue), PDB_REDO without Zen remediation (green) and original PDB (red) structure models. The whiskers extend to the nearest value that is within 1.5 times the inter-quartile range; outliers are marked as dots. The Z score for `Zn position' indicates the deviation from the expected Zn position in the tetrahedron. 1411 outliers with a Z-score outside (−15, +15) are not shown for clarity. 891 of these outliers are from PDB structure models, while 476 and 44 outliers are from PDB_REDO entries without and with Zen remediation, respectively. |