Exploiting distant homologues for phasing through the generation of compact fragments, local fold refinement and partial solution combination

Millán, C.; Sammito, M.D.; McCoy, A.J.; Nascimento, A.F.Z.; Petrillo, G.; Oeffner, R.D.; Domínguez-Gil, T.; Hermoso, J.A.; Read, R.J.; Usón, I.

doi:10.1107/S2059798318001365

Acta Crystallographica Section D
Acta Crystallographica
Section D STRUCTURAL BIOLOGY

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Figure 7
Tests on PDB entry 3fp2. (a) Final structure (blue) versus the 1w3b template used in ARCIMBOLDO_SHREDDER (orange). The r.m.s.d. between the structures is 4.95 Å over a core of 208 C^α atoms. (b) First level of annotation for refinement. (c) Second level of annotation for refinement. (d) R.m.s.d. of each of the three correct fragments to the final structure and over a common core using different refinement stages.

STRUCTURAL
BIOLOGY

ISSN: 2059-7983

Volume 74| Part 4| April 2018| Pages 290-304

https://doi.org/10.1107/S2059798318001365

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