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Figure 8
(a, c) An apparently over-sharpened map (PDB and EMDB codes 5NV3 and 3699, respectively; resolution 3.39 Å). Applying phenix.auto_sharpen improves the map by blurring it. (b, d) Subsequent refinement against the blurred map improves the model-to-map fit, as shown by CCmask reported per residue (e) (black dots).

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