Figure 2
(a) The 30 models obtained from the GREMLIN database for PF01790 (magenta) aligned with the crystallized structure, PDB entry 5azb (rainbow from blue at the N-terminus to red at the C-terminus). (b) The best-performing AMPLE-derived ensemble (magenta), derived by truncating cluster 1 down to 12% (33 residues), aligned with the crystallized structure, PDB entry 5azb (rainbow). (c) The 30 models obtained from the GREMLIN database for PF02470 (magenta) aligned with the crystallized structure, PDB entry 5uw2 (rainbow). (d) The best-performing AMPLE-derived ensemble (magenta), derived by truncating cluster 2 down to 80% (96 residues), aligned with the crystal structure, PDB entry 5uw2 (rainbow). (e) The 30 models obtained from the GREMLIN database for PF03883 (magenta) aligned with the crystallized structure, PDB entry 5caj (rainbow). (f) The best-performing AMPLE-derived ensemble (magenta), derived by truncating cluster 1 down to 54% (137 residues), aligned with the crystallized structure, PDB entry 5caj (rainbow). (g) The 30 models obtained from the GREMLIN database for PF06130 (magenta) aligned with the crystallized structure, PDB entry 5cuo (rainbow). (h) The best-performing AMPLE-derived ensemble (magenta), derived by truncating cluster 3 down to 70% (138 residues), aligned with the crystallized structure, PDB entry 5cuo (rainbow). |