Figure 5
Default atoms used for the generation of distance restraints in ISOLDE for (a) proteins and (b) nucleic acids. Restrained atoms are coloured green and displayed in a space-filling representation. These atoms are selected in order to generate a reasonably sparse network of restraints, relying on the MD forcefield to manage the detailed geometry. Demonstrations of the sufficiency of these restraints to recapitulate reference geometry may be found in Supplementary Movies S1 and S2. |