Figure 2
Boxplots representing interatomic distance (bond-length) distributions for the ten most common types of linkage that are unannotated using link/connectivity records in the PDB for which linkage descriptions are available in the CCP4-ML. Linkage types are encoded as `Monomer1[Atom1]–Monomer2[Atom2]'; these correspond to the rows in Table 2. For each linkage type, boxplots are shown corresponding to unannotated (orange, left) and annotated (grey, right) potential linkages. Ideal bond lengths according to the CCP4-ML are shown as solid red lines, with dotted red lines representing two estimated standard deviations from the target values. This figure was created using R (R Core Team, 2020). |