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Figure 3
Detection of repeats in the hypothetical protein EHM23_20970 using HHrepID. For the analysis, the sequence of each domain detected in EHM23_20970 with HHpred was used as input for two separate HHrepID jobs. (a) The self-comparison matrices for the two domains are shown. The boundaries of the domains are indicated within square brackets. Sequence repeats detected at a p-value threshold of 1 × 10−1 are shown as blue lines within a red box. (b) The multiple sequence alignment of the HEAT repeats detected in domain 1 at a p-value cutoff of 1 × 10−1 [represented by blue lines in (a)] are shown. The probability, p-value and the boundaries of the detected repeats are indicated.

Journal logoSTRUCTURAL
ISSN: 2059-7983
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