Figure 6
PDB entry 1sjp (59% sequence identity) pre-processed with CHAINSAW and fitted into EMDB entry EMD-1997 (7 Å resolution). Correctly placed (according to the r.m.s.d. scoring metric; Section 2.4) chains are shown in yellow and incorrectly placed chains are shown in purple. The incorrectly placed chains correspond to the final four models placed by MOLREP. Examining the packing-function scores from MOLREP in detail indicated that there were a lot more clashes to deal with when placing these models into the map. Thie figure was made using UCSF Chimera (version 1.5). |