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Figure 6
Variation in AAVR PKD1 and PKD2 domain structures during the MD simulations. (a) Frame r.m.s.d. of PKD1 in complex with the AAV5 dimer (black) and the hypothetical AAV4 dimer (red). (b) PKD2 in complex with the AAV9 dimer (black) and the hypothetical AAV4 dimer (red). The insets to the right of each graph show the distribution of r.m.s.d. values over the last 15 ns of simulation. (c–f) Comparison of the initial PKD structure (blue) with the final MD snapshot (red). AAVs of the initial structures are shown in white.

Journal logoSTRUCTURAL
BIOLOGY
ISSN: 2059-7983
Volume 79| Part 2| February 2023| Pages 140-153
https://doi.org/10.1107/S2059798322012190
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