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Figure 3
Scattergrams of real-space correlation coefficients (RSCCs) and root-mean-square deviations (r.m.s.d.s) of dinucleotides that are (a) assigned and (b) unassigned to NtC classes. The gray contours denote values for 99%, 95%, 50% and 5% of values in the data set of a curated ensemble of 497 chains of sequentially nonredundant and uncomplexed DNA from previously selected crystal structures with crystallographic resolution higher than 2.6 Å (Biedermannová et al., 2022BB4). The red dots mark the values for dinucleotides of ten analyzed structures. Vertical and horizontal lines represent borders between values that are deemed to be acceptable and poor. Details of the protocol for calculating the RSCC and r.m.s.d. values are given in the text and in Černý, Božíková, Svoboda et al. (2020BB6).

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ISSN: 2059-7983
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