Figure 5
Schematic view of the domain structure of a representative set of enzymes containing a CWBD homologous to that found in T. saccata muramidase. These were identified by mining the TrEMBL database of sequences. Here, `Sig' means signal peptide, amidase is an acylamide amidohydrolase, `C40' is cysteine peptidase family 40, `M23' is metallopeptidase family 23 and `GH24' and `GH73' are glycoside hydrolase families 24 and 73. All are concerned with the breakdown of bacterial cell-wall components. The TrEMBL code shown here for the GH184 family corresponds to the entry for a predicted SH3b domain-containing protein with the sequence derived from an EMBL/GenBank/DDBJ whole-genome shotgun (WGS) entry. |