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Figure 4
Comparison of various maps in the binding site of analogues 6A6, 11A7, 11A7_AL5 and 11A7_AL6 (row 1 to row 4, respectively). (a, d, g, j) PanDDA event maps [blue, 1.0σ, background density correction factor (BDC) = 0.37, 0.39, 0.18 and 0.25, respectively] and Z-maps (green/red, ±4.0σ). (b, e, h, k) Sulfur, iodine and bromine anomalous difference Fourier maps in the fragment region calculated from data collected at 4.5 keV (orange, 4σ) overlaid with mFoDFc maps (green, 3.0σ) calculated from the 12.8 keV data. (c, f, i, l) Refined 2mFoDFc maps (blue, 1.0σ) calculated from the 12.8 keV data with the S, I or Br atoms placed in the centres of their anomalous peaks. The 2mFoDFc map is almost complete for 6A6 (c), 11A7 (f) and 11A7_AL6 (l) but is partial for 11A7_AL5 (i). In Figs. 4[link], 5[link] and 6[link] and Supplementary Fig. S2, the C, N, O, S, F, Cl, Br and I atoms in the fragments are coloured cyan, blue, red, yellow, light blue, green, dark red and purple, respectively.

Journal logoSTRUCTURAL
BIOLOGY
ISSN: 2059-7983
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