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Figure 6
Sequence alignment of the PNAG catalytic domain of GH20 family members: DspB, the newly characterized dispersins, StrH (PDB entry 2yl8) and ScHexA (PDB entry 4c7f). Residues with a red background are conserved across all GH20 proteins. Residues with a dark blue background are conserved across all dispersins. Residues with 70% conservation across dispersins are highlighted in a light blue box. The numbering and the secondary-structure elements across the top of the alignment correspond to the sequence and fold of DspB: α, α-helix; β, β-strand. For DispCo, the N-terminal domain was omitted; the first residue included was Val102. In PDB entry 2yl8, the catalytic residue Glu361 of StrH is mutated to a glutamine; only the GH20 domain from residues 190 to 538 was used in the alignment. For ScHexA (PDB entry 4c7f), the GH20 domain between residues 153 and 535 (the C-terminus) was used in the alignment. Domain boundaries were predetermined (Val-Cid et al., 2015 ![]() |