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Figure 1
Organization of data within the PDB Beta Archive. A /wwpdb directory is introduced under the /pub top directory. Small-molecule data are stored in the /refdata/ subdirectory. PDB data, derived data and PDB holding files, which are inventory data files that offer a quick overview of data in the archive, are stored under the /pdb/ subfolder. 3D structure atomic coordinate model files, experimental data files, assembly files and validation reports associated with each entry are stored under its extended PDB ID subfolder under a hash directory. The /pdb_ihm/ folder consists of /data/ and /holdings/ subfolders corresponding to IHM structures (not shown) (Johnson et al., 2024View full citation; Baldwin et al., 2024View full citation).

Journal logoSTRUCTURAL
BIOLOGY
ISSN: 2059-7983
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