The structures of two pseudopolymorphs of
N-acetyl-
L-phenylalanine methyl ester,
L-AcFOMe, were determined at both 293 (2) and 150 (2) K. At room temperature, the orthorhombic phase C
12H
15NO
3 (I), with space group
P2
12
12
1, converts into the tetragonal phase C
12H
15NO
3·0.5H
2O (II), with space group
P4
12
12, in the presence of water. In the structures of both pseudopolymorphs, alternating layers of hydrophilic and hydrophobic intermolecular interaction can be distinguished. In the hydrophilic layers the structures are stabilized by moderate hydrogen bonds of the type N—H
O for the anhydrous
L-AcFOMe and of types N—H
O and O—H
O for the hemihydrate. Weak C—H
π interactions are observed within the hydrophobic layers: for (I) they are of type III [Malone
et al. (1997).
J. Chem. Soc. Faraday Trans. 93, 3429–3436], whereas typical type I edge-to-face interactions are present for (II). The differences between the hydrogen-bonding networks of (I) and (II) are discussed in terms of graph-set analysis.
Supporting information
CCDC references: 685155; 685156; 685157; 685158
(type here to add preparation details)
(type here to add refinement details)
For all compounds, data collection: COLLECT (Nonius, 1997); cell refinement: DENZO-SMN (Otwinowski & Minor, 1997); data reduction: HKL DENZO and SCALEPACK (Otwinowski & Minor, 1997); program(s) used to solve structure: SIR92 (Altomare et al., 1994); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: PLATON (Spek, 2003); ORTEP-3 for Windows (Farrugia, 1997); Mercury (Version 1.4; Macrae et al., 2006); software used to prepare material for publication: SHELXL97 (Sheldrick, 1997).
(Ia)
N-Acetyl-
L-phenylalanine methyl ester
top
Crystal data top
C12H15NO3 | Dx = 1.205 Mg m−3 |
Mr = 221.25 | Mo Kα radiation, λ = 0.71073 Å |
Orthorhombic, P212121 | Cell parameters from 1546 reflections |
a = 4.9910 (1) Å | θ = 1.0–27.5° |
b = 8.7145 (2) Å | µ = 0.09 mm−1 |
c = 28.0411 (7) Å | T = 293 K |
V = 1219.62 (5) Å3 | Prism, colourless |
Z = 4 | 0.32 × 0.20 × 0.16 mm |
F(000) = 472 | |
Data collection top
KappaCCD diffractometer | 1656 independent reflections |
Radiation source: fine-focus sealed tube | 1126 reflections with I > 2σ(I) |
Horizontally mounted graphite crystal monochromator | Rint = 0.025 |
Detector resolution: 9 pixels mm-1 | θmax = 27.5°, θmin = 3.2° |
ϕ scans and ω scans to fill asymmetric unit | h = −6→6 |
Absorption correction: multi-scan HKL DENZO and SCALEPACK (Otwinowski & Minor, 1997) | k = −11→11 |
Tmin = 0.973, Tmax = 0.986 | l = −35→36 |
8443 measured reflections | |
Refinement top
Refinement on F2 | H atoms treated by a mixture of independent and constrained refinement |
Least-squares matrix: full | w = 1/[σ2(Fo2) + (0.0634P)2 + 0.0884P] where P = (Fo2 + 2Fc2)/3 |
R[F2 > 2σ(F2)] = 0.042 | (Δ/σ)max < 0.001 |
wR(F2) = 0.116 | Δρmax = 0.14 e Å−3 |
S = 0.98 | Δρmin = −0.17 e Å−3 |
1656 reflections | Extinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
151 parameters | Extinction coefficient: 0.047 (8) |
0 restraints | |
Crystal data top
C12H15NO3 | V = 1219.62 (5) Å3 |
Mr = 221.25 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 4.9910 (1) Å | µ = 0.09 mm−1 |
b = 8.7145 (2) Å | T = 293 K |
c = 28.0411 (7) Å | 0.32 × 0.20 × 0.16 mm |
Data collection top
KappaCCD diffractometer | 1656 independent reflections |
Absorption correction: multi-scan HKL DENZO and SCALEPACK (Otwinowski & Minor, 1997) | 1126 reflections with I > 2σ(I) |
Tmin = 0.973, Tmax = 0.986 | Rint = 0.025 |
8443 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.042 | 0 restraints |
wR(F2) = 0.116 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.98 | Δρmax = 0.14 e Å−3 |
1656 reflections | Δρmin = −0.17 e Å−3 |
151 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
N1 | 0.9648 (4) | 0.1871 (2) | 0.14259 (7) | 0.0530 (5) | |
H1 | 1.146 (6) | 0.202 (3) | 0.1465 (8) | 0.054 (6)* | |
C1 | 0.8270 (5) | −0.0331 (3) | 0.19033 (9) | 0.0585 (6) | |
O1 | 0.9347 (5) | 0.0111 (2) | 0.22578 (7) | 0.0987 (8) | |
C2 | 0.8724 (5) | 0.0303 (2) | 0.14076 (8) | 0.0498 (5) | |
H2 | 0.6988 | 0.0305 | 0.1245 | 0.060* | |
O2 | 0.6520 (4) | −0.1475 (2) | 0.18916 (6) | 0.0760 (6) | |
C3 | 1.0621 (5) | −0.0715 (2) | 0.11151 (8) | 0.0571 (6) | |
H3A | 1.2445 | −0.0557 | 0.1224 | 0.069* | |
H3B | 1.0168 | −0.1784 | 0.1169 | 0.069* | |
C4 | 1.0461 (5) | −0.0373 (2) | 0.05895 (8) | 0.0504 (5) | |
C5 | 0.8514 (6) | −0.1080 (3) | 0.03140 (10) | 0.0622 (6) | |
H5 | 0.7361 | −0.1787 | 0.0454 | 0.075* | |
C6 | 1.2140 (5) | 0.0674 (3) | 0.03718 (9) | 0.0606 (6) | |
H6 | 1.3465 | 0.1160 | 0.0549 | 0.073* | |
C7 | 0.8262 (6) | −0.0749 (3) | −0.01654 (10) | 0.0699 (7) | |
H7 | 0.6959 | −0.1240 | −0.0347 | 0.084* | |
C8 | 1.1867 (6) | 0.1007 (3) | −0.01082 (10) | 0.0702 (7) | |
H8 | 1.3009 | 0.1714 | −0.0251 | 0.084* | |
C9 | 0.9932 (6) | 0.0303 (3) | −0.03738 (10) | 0.0681 (7) | |
H9 | 0.9747 | 0.0538 | −0.0696 | 0.082* | |
C10 | 0.7934 (5) | 0.3036 (3) | 0.14765 (8) | 0.0514 (6) | |
O10 | 0.5508 (3) | 0.28266 (19) | 0.14871 (7) | 0.0675 (5) | |
C11 | 0.9138 (7) | 0.4596 (3) | 0.15162 (10) | 0.0693 (7) | |
H11A | 0.7909 | 0.5342 | 0.1392 | 0.083* | |
H11B | 1.0777 | 0.4630 | 0.1337 | 0.083* | |
H11C | 0.9503 | 0.4819 | 0.1845 | 0.083* | |
C12 | 0.5831 (9) | −0.2164 (4) | 0.23451 (11) | 0.0963 (11) | |
H12A | 0.4550 | −0.2970 | 0.2295 | 0.116* | |
H12B | 0.5071 | −0.1398 | 0.2551 | 0.116* | |
H12C | 0.7414 | −0.2580 | 0.2490 | 0.116* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
N1 | 0.0353 (10) | 0.0541 (10) | 0.0695 (13) | −0.0007 (9) | 0.0004 (9) | −0.0018 (9) |
C1 | 0.0505 (14) | 0.0616 (13) | 0.0633 (15) | 0.0024 (13) | −0.0022 (12) | 0.0026 (12) |
O1 | 0.122 (2) | 0.1120 (15) | 0.0615 (12) | −0.0335 (17) | −0.0175 (12) | 0.0068 (10) |
C2 | 0.0365 (11) | 0.0548 (11) | 0.0582 (13) | −0.0003 (11) | −0.0013 (10) | 0.0023 (10) |
O2 | 0.0780 (12) | 0.0822 (11) | 0.0679 (11) | −0.0206 (11) | 0.0039 (10) | 0.0176 (9) |
C3 | 0.0491 (13) | 0.0552 (12) | 0.0670 (15) | 0.0064 (12) | 0.0012 (12) | 0.0051 (11) |
C4 | 0.0426 (11) | 0.0456 (10) | 0.0630 (14) | 0.0069 (11) | 0.0052 (11) | −0.0036 (10) |
C5 | 0.0553 (14) | 0.0561 (13) | 0.0752 (16) | −0.0077 (13) | 0.0053 (14) | −0.0066 (12) |
C6 | 0.0487 (14) | 0.0639 (14) | 0.0691 (16) | −0.0046 (12) | −0.0015 (12) | 0.0000 (12) |
C7 | 0.0669 (16) | 0.0735 (16) | 0.0692 (16) | −0.0016 (16) | −0.0077 (14) | −0.0174 (13) |
C8 | 0.0592 (15) | 0.0782 (16) | 0.0732 (17) | −0.0038 (15) | 0.0128 (15) | 0.0101 (13) |
C9 | 0.0648 (17) | 0.0774 (16) | 0.0622 (15) | 0.0109 (15) | 0.0040 (14) | −0.0030 (13) |
C10 | 0.0475 (13) | 0.0601 (13) | 0.0467 (12) | 0.0045 (12) | −0.0013 (11) | 0.0023 (10) |
O10 | 0.0434 (9) | 0.0736 (11) | 0.0856 (13) | 0.0077 (10) | 0.0026 (9) | −0.0030 (9) |
C11 | 0.0733 (17) | 0.0579 (13) | 0.0769 (16) | −0.0003 (15) | −0.0063 (15) | −0.0054 (11) |
C12 | 0.109 (3) | 0.094 (2) | 0.086 (2) | −0.003 (2) | 0.0220 (19) | 0.0322 (16) |
Geometric parameters (Å, º) top
N1—C10 | 1.336 (3) | C6—C8 | 1.384 (4) |
N1—C2 | 1.443 (3) | C6—H6 | 0.9300 |
N1—H1 | 0.92 (3) | C7—C9 | 1.370 (4) |
C1—O1 | 1.194 (3) | C7—H7 | 0.9300 |
C1—O2 | 1.326 (3) | C8—C9 | 1.365 (4) |
C1—C2 | 1.513 (3) | C8—H8 | 0.9300 |
C2—C3 | 1.535 (3) | C9—H9 | 0.9300 |
C2—H2 | 0.9800 | C10—O10 | 1.225 (3) |
O2—C12 | 1.448 (3) | C10—C11 | 1.490 (3) |
C3—C4 | 1.506 (3) | C11—H11A | 0.9600 |
C3—H3A | 0.9700 | C11—H11B | 0.9600 |
C3—H3B | 0.9700 | C11—H11C | 0.9600 |
C4—C6 | 1.382 (3) | C12—H12A | 0.9600 |
C4—C5 | 1.386 (3) | C12—H12B | 0.9600 |
C5—C7 | 1.380 (4) | C12—H12C | 0.9600 |
C5—H5 | 0.9300 | | |
| | | |
C10—N1—C2 | 121.3 (2) | C4—C6—H6 | 119.7 |
C10—N1—H1 | 121 (2) | C8—C6—H6 | 119.7 |
C2—N1—H1 | 117 (2) | C9—C7—C5 | 120.0 (3) |
O1—C1—O2 | 124.0 (2) | C9—C7—H7 | 120.0 |
O1—C1—C2 | 125.5 (2) | C5—C7—H7 | 120.0 |
O2—C1—C2 | 110.5 (2) | C9—C8—C6 | 120.4 (3) |
N1—C2—C1 | 111.2 (2) | C9—C8—H8 | 119.8 |
N1—C2—C3 | 111.7 (2) | C6—C8—H8 | 119.8 |
C1—C2—C3 | 111.9 (2) | C8—C9—C7 | 119.9 (3) |
N1—C2—H2 | 107.3 | C8—C9—H9 | 120.1 |
C1—C2—H2 | 107.3 | C7—C9—H9 | 120.1 |
C3—C2—H2 | 107.3 | O10—C10—N1 | 121.5 (2) |
C1—O2—C12 | 116.5 (2) | O10—C10—C11 | 122.2 (2) |
C4—C3—C2 | 112.1 (2) | N1—C10—C11 | 116.3 (2) |
C4—C3—H3A | 109.2 | C10—C11—H11A | 109.5 |
C2—C3—H3A | 109.2 | C10—C11—H11B | 109.5 |
C4—C3—H3B | 109.2 | H11A—C11—H11B | 109.5 |
C2—C3—H3B | 109.2 | C10—C11—H11C | 109.5 |
H3A—C3—H3B | 107.9 | H11A—C11—H11C | 109.5 |
C6—C4—C5 | 118.2 (2) | H11B—C11—H11C | 109.5 |
C6—C4—C3 | 122.1 (2) | O2—C12—H12A | 109.5 |
C5—C4—C3 | 119.7 (2) | O2—C12—H12B | 109.5 |
C7—C5—C4 | 120.9 (3) | H12A—C12—H12B | 109.5 |
C7—C5—H5 | 119.5 | O2—C12—H12C | 109.5 |
C4—C5—H5 | 119.5 | H12A—C12—H12C | 109.5 |
C4—C6—C8 | 120.6 (2) | H12B—C12—H12C | 109.5 |
| | | |
C10—N1—C2—C1 | −82.6 (3) | C2—C3—C4—C5 | −85.4 (2) |
C10—N1—C2—C3 | 151.8 (2) | C6—C4—C5—C7 | 0.2 (3) |
O1—C1—C2—N1 | −25.1 (4) | C3—C4—C5—C7 | 177.8 (2) |
O2—C1—C2—N1 | 155.9 (2) | C5—C4—C6—C8 | 0.2 (3) |
O1—C1—C2—C3 | 100.5 (3) | C3—C4—C6—C8 | −177.4 (2) |
O2—C1—C2—C3 | −78.6 (2) | C4—C5—C7—C9 | −0.7 (4) |
O1—C1—O2—C12 | 2.7 (4) | C4—C6—C8—C9 | 0.0 (4) |
C2—C1—O2—C12 | −178.2 (2) | C6—C8—C9—C7 | −0.6 (4) |
N1—C2—C3—C4 | −71.4 (3) | C5—C7—C9—C8 | 0.9 (4) |
C1—C2—C3—C4 | 163.3 (2) | C2—N1—C10—O10 | −3.4 (3) |
C2—C3—C4—C6 | 92.1 (3) | C2—N1—C10—C11 | 176.9 (2) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O10i | 0.92 (3) | 2.14 (3) | 3.046 (3) | 168 (2) |
C12—H12C···O1ii | 0.96 | 2.68 | 3.560 (4) | 153 |
C11—H11C···O1iii | 0.96 | 2.59 | 3.548 (3) | 174 |
C12—H12B···O10iv | 0.96 | 2.80 | 3.342 (4) | 117 |
C9—H9···O10v | 0.93 | 2.66 | 3.533 (3) | 156 |
C8—H8···CG1v | 0.93 | 3.12 | 3.88 (4) | 141 |
Symmetry codes: (i) x+1, y, z; (ii) −x+2, y−1/2, −z+1/2; (iii) −x+2, y+1/2, −z+1/2; (iv) −x+1, y−1/2, −z+1/2; (v) x+1/2, −y+1/2, −z. |
(Ib)
N-Acetyl-
L-phenylalanine methyl ester
top
Crystal data top
C12H15NO3 | Dx = 1.243 Mg m−3 |
Mr = 221.25 | Mo Kα radiation, λ = 0.71073 Å |
Orthorhombic, P212121 | Cell parameters from 2846 reflections |
a = 4.9488 (2) Å | θ = 1.0–30.0° |
b = 8.6359 (6) Å | µ = 0.09 mm−1 |
c = 27.6622 (10) Å | T = 150 K |
V = 1182.21 (10) Å3 | Prism, colourless |
Z = 4 | 0.32 × 0.20 × 0.16 mm |
F(000) = 472 | |
Data collection top
KappaCCD diffractometer | 2019 independent reflections |
Radiation source: fine-focus sealed tube | 1736 reflections with I > 2σ(I) |
Horizontally mounted graphite crystal monochromator | Rint = 0.028 |
Detector resolution: 9 pixels mm-1 | θmax = 30.1°, θmin = 3.2° |
ω scans at χ = 55 deg | h = −6→6 |
Absorption correction: multi-scan HKL DENZO and SCALEPACK (Otwinowski & Minor, 1997) | k = −12→12 |
Tmin = 0.972, Tmax = 0.986 | l = −38→38 |
8592 measured reflections | |
Refinement top
Refinement on F2 | 0 restraints |
Least-squares matrix: full | Primary atom site location: structure-invariant direct methods |
R[F2 > 2σ(F2)] = 0.039 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.096 | w = 1/[σ2(Fo2) + (0.0476P)2 + 0.1338P] where P = (Fo2 + 2Fc2)/3 |
S = 1.04 | (Δ/σ)max < 0.001 |
2019 reflections | Δρmax = 0.20 e Å−3 |
150 parameters | Δρmin = −0.20 e Å−3 |
Crystal data top
C12H15NO3 | V = 1182.21 (10) Å3 |
Mr = 221.25 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 4.9488 (2) Å | µ = 0.09 mm−1 |
b = 8.6359 (6) Å | T = 150 K |
c = 27.6622 (10) Å | 0.32 × 0.20 × 0.16 mm |
Data collection top
KappaCCD diffractometer | 2019 independent reflections |
Absorption correction: multi-scan HKL DENZO and SCALEPACK (Otwinowski & Minor, 1997) | 1736 reflections with I > 2σ(I) |
Tmin = 0.972, Tmax = 0.986 | Rint = 0.028 |
8592 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.039 | 0 restraints |
wR(F2) = 0.096 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | Δρmax = 0.20 e Å−3 |
2019 reflections | Δρmin = −0.20 e Å−3 |
150 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
N1 | 0.9756 (3) | 0.17369 (15) | 0.14176 (5) | 0.0230 (3) | |
H1 | 1.165 (5) | 0.189 (2) | 0.1458 (8) | 0.041 (6)* | |
C1 | 0.8299 (3) | −0.05130 (18) | 0.18902 (6) | 0.0253 (3) | |
O1 | 0.9382 (3) | −0.00806 (16) | 0.22535 (5) | 0.0473 (4) | |
C2 | 0.8774 (3) | 0.01612 (17) | 0.13890 (5) | 0.0214 (3) | |
H2 | 0.6989 | 0.0189 | 0.1220 | 0.026* | |
O2 | 0.6494 (3) | −0.16546 (14) | 0.18699 (4) | 0.0339 (3) | |
C3 | 1.0673 (4) | −0.08635 (17) | 0.10878 (6) | 0.0243 (3) | |
H3A | 1.2552 | −0.0728 | 0.1203 | 0.029* | |
H3B | 1.0171 | −0.1964 | 0.1132 | 0.029* | |
C4 | 1.0517 (3) | −0.04506 (17) | 0.05556 (5) | 0.0219 (3) | |
C5 | 0.8513 (4) | −0.11234 (18) | 0.02703 (6) | 0.0266 (3) | |
H5 | 0.7321 | −0.1866 | 0.0407 | 0.032* | |
C6 | 1.2237 (3) | 0.06351 (19) | 0.03498 (6) | 0.0267 (3) | |
H6 | 1.3609 | 0.1101 | 0.0541 | 0.032* | |
C7 | 0.8253 (4) | −0.07116 (19) | −0.02125 (6) | 0.0285 (4) | |
H7 | 0.6892 | −0.1179 | −0.0406 | 0.034* | |
C8 | 1.1968 (4) | 0.1047 (2) | −0.01344 (6) | 0.0305 (4) | |
H8 | 1.3158 | 0.1789 | −0.0273 | 0.037* | |
C9 | 0.9970 (4) | 0.03776 (19) | −0.04141 (6) | 0.0298 (4) | |
H9 | 0.9775 | 0.0664 | −0.0744 | 0.036* | |
C10 | 0.8025 (3) | 0.29163 (18) | 0.14876 (6) | 0.0226 (3) | |
O10 | 0.5566 (2) | 0.27063 (13) | 0.15013 (5) | 0.0301 (3) | |
C11 | 0.9267 (4) | 0.44933 (18) | 0.15400 (6) | 0.0301 (4) | |
H11A | 0.8127 | 0.5261 | 0.1377 | 0.036* | |
H11B | 1.1069 | 0.4494 | 0.1393 | 0.036* | |
H11C | 0.9414 | 0.4755 | 0.1884 | 0.036* | |
C12 | 0.5786 (5) | −0.2361 (2) | 0.23292 (7) | 0.0435 (5) | |
H12A | 0.4453 | −0.3182 | 0.2275 | 0.052* | |
H12B | 0.5019 | −0.1573 | 0.2544 | 0.052* | |
H12C | 0.7409 | −0.2803 | 0.2478 | 0.052* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
N1 | 0.0180 (6) | 0.0219 (6) | 0.0289 (7) | −0.0006 (5) | 0.0001 (5) | −0.0009 (5) |
C1 | 0.0242 (8) | 0.0274 (7) | 0.0243 (7) | 0.0023 (7) | −0.0007 (7) | 0.0005 (6) |
O1 | 0.0644 (10) | 0.0519 (8) | 0.0255 (6) | −0.0168 (8) | −0.0088 (7) | 0.0017 (6) |
C2 | 0.0180 (7) | 0.0235 (7) | 0.0226 (7) | −0.0006 (6) | −0.0017 (6) | 0.0009 (6) |
O2 | 0.0366 (7) | 0.0369 (6) | 0.0281 (6) | −0.0095 (6) | 0.0014 (6) | 0.0081 (5) |
C3 | 0.0251 (8) | 0.0230 (7) | 0.0248 (7) | 0.0030 (7) | −0.0015 (7) | 0.0012 (6) |
C4 | 0.0209 (7) | 0.0205 (7) | 0.0243 (7) | 0.0037 (6) | 0.0026 (6) | −0.0014 (6) |
C5 | 0.0270 (8) | 0.0246 (7) | 0.0281 (8) | −0.0018 (7) | 0.0031 (7) | −0.0003 (6) |
C6 | 0.0219 (8) | 0.0276 (7) | 0.0305 (8) | −0.0007 (7) | −0.0009 (7) | 0.0005 (7) |
C7 | 0.0299 (8) | 0.0291 (8) | 0.0266 (8) | −0.0004 (8) | −0.0028 (7) | −0.0048 (6) |
C8 | 0.0266 (8) | 0.0327 (8) | 0.0321 (9) | −0.0012 (7) | 0.0065 (7) | 0.0066 (7) |
C9 | 0.0312 (9) | 0.0344 (8) | 0.0238 (8) | 0.0072 (7) | 0.0031 (7) | 0.0027 (7) |
C10 | 0.0239 (8) | 0.0273 (7) | 0.0165 (7) | 0.0024 (6) | −0.0007 (6) | 0.0020 (6) |
O10 | 0.0206 (6) | 0.0331 (6) | 0.0366 (7) | 0.0029 (5) | 0.0017 (5) | −0.0005 (5) |
C11 | 0.0311 (9) | 0.0267 (7) | 0.0325 (8) | 0.0002 (7) | −0.0041 (8) | −0.0028 (7) |
C12 | 0.0504 (12) | 0.0443 (10) | 0.0360 (10) | −0.0032 (10) | 0.0110 (9) | 0.0160 (8) |
Geometric parameters (Å, º) top
N1—C10 | 1.345 (2) | C6—C8 | 1.392 (2) |
N1—C2 | 1.447 (2) | C6—H6 | 0.9500 |
N1—H1 | 0.95 (2) | C7—C9 | 1.385 (2) |
C1—O1 | 1.199 (2) | C7—H7 | 0.9500 |
C1—O2 | 1.332 (2) | C8—C9 | 1.382 (2) |
C1—C2 | 1.522 (2) | C8—H8 | 0.9500 |
C2—C3 | 1.536 (2) | C9—H9 | 0.9500 |
C2—H2 | 1.0000 | C10—O10 | 1.231 (2) |
O2—C12 | 1.452 (2) | C10—C11 | 1.501 (2) |
C3—C4 | 1.517 (2) | C11—H11A | 0.9800 |
C3—H3A | 0.9900 | C11—H11B | 0.9800 |
C3—H3B | 0.9900 | C11—H11C | 0.9800 |
C4—C6 | 1.388 (2) | C12—H12A | 0.9800 |
C4—C5 | 1.394 (2) | C12—H12B | 0.9800 |
C5—C7 | 1.388 (2) | C12—H12C | 0.9800 |
C5—H5 | 0.9500 | | |
| | | |
C10—N1—C2 | 120.4 (1) | C4—C6—H6 | 119.7 |
C10—N1—H1 | 120 (1) | C8—C6—H6 | 119.7 |
C2—N1—H1 | 118 (1) | C9—C7—C5 | 120.3 (2) |
O1—C1—O2 | 124.5 (2) | C9—C7—H7 | 119.8 |
O1—C1—C2 | 125.1 (2) | C5—C7—H7 | 119.8 |
O2—C1—C2 | 110.4 (1) | C9—C8—C6 | 120.0 (2) |
N1—C2—C1 | 111.2 (1) | C9—C8—H8 | 120.0 |
N1—C2—C3 | 111.5 (1) | C6—C8—H8 | 120.0 |
C1—C2—C3 | 111.6 (1) | C8—C9—C7 | 119.9 (2) |
N1—C2—H2 | 107.4 | C8—C9—H9 | 120.1 |
C1—C2—H2 | 107.4 | C7—C9—H9 | 120.1 |
C3—C2—H2 | 107.4 | O10—C10—N1 | 121.5 (2) |
C1—O2—C12 | 115.8 (1) | O10—C10—C11 | 122.4 (2) |
C4—C3—C2 | 111.1 (1) | N1—C10—C11 | 116.1 (1) |
C4—C3—H3A | 109.4 | C10—C11—H11A | 109.5 |
C2—C3—H3A | 109.4 | C10—C11—H11B | 109.5 |
C4—C3—H3B | 109.4 | H11A—C11—H11B | 109.5 |
C2—C3—H3B | 109.4 | C10—C11—H11C | 109.5 |
H3A—C3—H3B | 108.0 | H11A—C11—H11C | 109.5 |
C6—C4—C5 | 119.0 (2) | H11B—C11—H11C | 109.5 |
C6—C4—C3 | 121.7 (2) | O2—C12—H12A | 109.5 |
C5—C4—C3 | 119.2 (1) | O2—C12—H12B | 109.5 |
C7—C5—C4 | 120.3 (2) | H12A—C12—H12B | 109.5 |
C7—C5—H5 | 119.9 | O2—C12—H12C | 109.5 |
C4—C5—H5 | 119.9 | H12A—C12—H12C | 109.5 |
C4—C6—C8 | 120.6 (2) | H12B—C12—H12C | 109.5 |
| | | |
C10—N1—C2—C1 | −81.2 (2) | C2—C3—C4—C5 | −85.5 (2) |
C10—N1—C2—C3 | 153.6 (1) | C6—C4—C5—C7 | 0.1 (2) |
O1—C1—C2—N1 | −23.9 (2) | C3—C4—C5—C7 | 177.1 (2) |
O2—C1—C2—N1 | 155.9 (1) | C5—C4—C6—C8 | 0.0 (2) |
O1—C1—C2—C3 | 101.3 (2) | C3—C4—C6—C8 | −176.9 (2) |
O2—C1—C2—C3 | −79.0 (2) | C4—C5—C7—C9 | −0.4 (3) |
O1—C1—O2—C12 | 1.9 (3) | C4—C6—C8—C9 | 0.2 (3) |
C2—C1—O2—C12 | −177.9 (2) | C6—C8—C9—C7 | −0.5 (3) |
N1—C2—C3—C4 | −71.0 (2) | C5—C7—C9—C8 | 0.6 (2) |
C1—C2—C3—C4 | 164.0 (1) | C2—N1—C10—O10 | −4.2 (2) |
C2—C3—C4—C6 | 91.4 (2) | C2—N1—C10—C11 | 176.7 (1) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O10i | 0.95 (2) | 2.06 (2) | 3.003 (2) | 168 (2) |
C12—H12C···O1ii | 0.98 | 2.63 | 3.545 (3) | 155 |
C11—H11C···O1iii | 0.98 | 2.46 | 3.424 (2) | 166 |
C12—H12B···O10iv | 0.98 | 2.73 | 3.304 (2) | 118 |
C9—H9···O10v | 0.95 | 2.55 | 3.445 (2) | 156 |
C8—H8···CG1v | 0.95 | 3.04 | 3.81 (4) | 139 |
Symmetry codes: (i) x+1, y, z; (ii) −x+2, y−1/2, −z+1/2; (iii) −x+2, y+1/2, −z+1/2; (iv) −x+1, y−1/2, −z+1/2; (v) x+1/2, −y+1/2, −z. |
(IIa)
N-Acetyl-
L-phenylalanine methyl ester hemihydrate
top
Crystal data top
2(C12H15NO3)·H2O | Dx = 1.256 Mg m−3 |
Mr = 460.52 | Mo Kα radiation, λ = 0.71073 Å |
Tetragonal, P41212 | Cell parameters from 3565 reflections |
a = 7.1582 (1) Å | θ = 2.9–33.7° |
c = 47.5286 (6) Å | µ = 0.09 mm−1 |
V = 2435.36 (6) Å3 | T = 293 K |
Z = 4 | Prism, colourless |
F(000) = 984 | 0.32 × 0.12 × 0.12 mm |
Data collection top
KappaCCD diffractometer | 1738 independent reflections |
Radiation source: fine-focus sealed tube | 1270 reflections with I > 2σ(I) |
Horizontally mounted graphite crystal monochromator | Rint = 0.026 |
Detector resolution: 9 pixels mm-1 | θmax = 27.5°, θmin = 3.0° |
ω scans at χ = 55 deg | h = −9→9 |
Absorption correction: multi-scan HKL DENZO and SCALEPACK (Otwinowski & Minor, 1997) | k = −6→6 |
Tmin = 0.971, Tmax = 0.989 | l = −61→61 |
11430 measured reflections | |
Refinement top
Refinement on F2 | H-atom parameters constrained |
Least-squares matrix: full | w = 1/[σ2(Fo2) + (0.0566P)2 + 0.2801P] where P = (Fo2 + 2Fc2)/3 |
R[F2 > 2σ(F2)] = 0.045 | (Δ/σ)max < 0.001 |
wR(F2) = 0.119 | Δρmax = 0.17 e Å−3 |
S = 1.06 | Δρmin = −0.17 e Å−3 |
1738 reflections | Extinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
152 parameters | Extinction coefficient: 0.019 (3) |
0 restraints | |
Crystal data top
2(C12H15NO3)·H2O | Z = 4 |
Mr = 460.52 | Mo Kα radiation |
Tetragonal, P41212 | µ = 0.09 mm−1 |
a = 7.1582 (1) Å | T = 293 K |
c = 47.5286 (6) Å | 0.32 × 0.12 × 0.12 mm |
V = 2435.36 (6) Å3 | |
Data collection top
KappaCCD diffractometer | 1738 independent reflections |
Absorption correction: multi-scan HKL DENZO and SCALEPACK (Otwinowski & Minor, 1997) | 1270 reflections with I > 2σ(I) |
Tmin = 0.971, Tmax = 0.989 | Rint = 0.026 |
11430 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.045 | 0 restraints |
wR(F2) = 0.119 | H-atom parameters constrained |
S = 1.06 | Δρmax = 0.17 e Å−3 |
1738 reflections | Δρmin = −0.17 e Å−3 |
152 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
N1 | 0.1621 (3) | 0.1351 (3) | 0.21800 (3) | 0.0401 (5) | |
H1 | 0.1807 | 0.0253 | 0.2256 | 0.048* | |
C1 | −0.1544 (4) | 0.1807 (4) | 0.19968 (5) | 0.0443 (6) | |
O1 | −0.2369 (3) | 0.1170 (4) | 0.21906 (4) | 0.0745 (7) | |
C2 | 0.0499 (3) | 0.1447 (3) | 0.19260 (4) | 0.0398 (6) | |
H2 | 0.0962 | 0.2468 | 0.1808 | 0.048* | |
O2 | −0.2328 (2) | 0.2886 (3) | 0.18015 (3) | 0.0531 (5) | |
C3 | 0.0631 (3) | −0.0394 (4) | 0.17608 (5) | 0.0446 (6) | |
H3A | 0.0402 | −0.1426 | 0.1888 | 0.054* | |
H3B | −0.0342 | −0.0412 | 0.1619 | 0.054* | |
C4 | 0.2496 (3) | −0.0680 (3) | 0.16196 (5) | 0.0401 (6) | |
C5 | 0.2855 (4) | 0.0142 (4) | 0.13604 (5) | 0.0487 (7) | |
H5 | 0.1934 | 0.0857 | 0.1274 | 0.058* | |
C6 | 0.3884 (4) | −0.1737 (4) | 0.17408 (5) | 0.0452 (6) | |
H6 | 0.3666 | −0.2316 | 0.1913 | 0.054* | |
C7 | 0.4556 (4) | −0.0087 (4) | 0.12293 (5) | 0.0560 (8) | |
H7 | 0.4774 | 0.0470 | 0.1056 | 0.067* | |
C8 | 0.5602 (4) | −0.1952 (4) | 0.16101 (5) | 0.0519 (7) | |
H8 | 0.6534 | −0.2653 | 0.1696 | 0.062* | |
C9 | 0.5931 (4) | −0.1137 (4) | 0.13546 (5) | 0.0558 (7) | |
H9 | 0.7079 | −0.1292 | 0.1266 | 0.067* | |
C10 | 0.2155 (3) | 0.2901 (4) | 0.23140 (5) | 0.0416 (6) | |
O10 | 0.1785 (3) | 0.4469 (3) | 0.22203 (4) | 0.0571 (5) | |
C11 | 0.3251 (4) | 0.2628 (4) | 0.25810 (5) | 0.0574 (8) | |
H11A | 0.4532 | 0.2967 | 0.2549 | 0.069* | |
H11B | 0.3185 | 0.1341 | 0.2637 | 0.069* | |
H11C | 0.2737 | 0.3401 | 0.2727 | 0.069* | |
C12 | −0.4319 (4) | 0.3171 (4) | 0.18295 (6) | 0.0593 (8) | |
H12A | −0.4754 | 0.3952 | 0.1679 | 0.071* | |
H12B | −0.4578 | 0.3763 | 0.2006 | 0.071* | |
H12C | −0.4947 | 0.1987 | 0.1822 | 0.071* | |
O5 | 0.2188 (2) | −0.2188 (2) | 0.2500 | 0.0471 (6) | |
H51 | 0.3284 | −0.1991 | 0.2565 | 0.057* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
N1 | 0.0437 (12) | 0.0337 (11) | 0.0428 (10) | 0.0011 (9) | −0.0066 (9) | −0.0036 (9) |
C1 | 0.0439 (15) | 0.0470 (15) | 0.0421 (12) | 0.0025 (12) | −0.0001 (11) | −0.0038 (12) |
O1 | 0.0538 (13) | 0.1087 (19) | 0.0611 (11) | 0.0080 (12) | 0.0146 (10) | 0.0282 (12) |
C2 | 0.0386 (13) | 0.0415 (14) | 0.0392 (11) | −0.0022 (11) | 0.0007 (11) | −0.0025 (11) |
O2 | 0.0395 (10) | 0.0621 (12) | 0.0577 (10) | 0.0069 (9) | 0.0024 (8) | 0.0097 (9) |
C3 | 0.0400 (14) | 0.0464 (15) | 0.0474 (13) | −0.0018 (11) | −0.0020 (11) | −0.0083 (12) |
C4 | 0.0438 (15) | 0.0384 (14) | 0.0381 (11) | −0.0017 (11) | −0.0010 (10) | −0.0103 (10) |
C5 | 0.0549 (17) | 0.0468 (16) | 0.0446 (13) | 0.0059 (13) | −0.0026 (13) | −0.0027 (11) |
C6 | 0.0481 (15) | 0.0491 (16) | 0.0383 (11) | −0.0003 (12) | −0.0021 (11) | 0.0008 (11) |
C7 | 0.068 (2) | 0.0572 (18) | 0.0431 (13) | −0.0035 (15) | 0.0061 (14) | 0.0006 (13) |
C8 | 0.0432 (15) | 0.0573 (18) | 0.0552 (14) | 0.0048 (13) | −0.0059 (12) | −0.0030 (14) |
C9 | 0.0475 (17) | 0.065 (2) | 0.0550 (14) | −0.0032 (15) | 0.0093 (13) | −0.0114 (15) |
C10 | 0.0380 (13) | 0.0429 (15) | 0.0439 (12) | −0.0014 (12) | 0.0028 (11) | −0.0077 (12) |
O10 | 0.0740 (14) | 0.0366 (10) | 0.0606 (10) | 0.0006 (10) | −0.0076 (10) | −0.0084 (9) |
C11 | 0.0646 (19) | 0.0596 (18) | 0.0479 (14) | −0.0038 (14) | −0.0093 (13) | −0.0077 (12) |
C12 | 0.0404 (16) | 0.0607 (19) | 0.0770 (18) | 0.0048 (14) | −0.0031 (14) | −0.0018 (16) |
O5 | 0.0415 (9) | 0.0415 (9) | 0.0585 (13) | 0.0010 (11) | −0.0076 (8) | −0.0076 (8) |
Geometric parameters (Å, º) top
N1—C10 | 1.335 (3) | C6—C8 | 1.387 (4) |
N1—C2 | 1.452 (3) | C6—H6 | 0.9300 |
N1—H1 | 0.8752 | C7—C9 | 1.374 (4) |
C1—O1 | 1.186 (3) | C7—H7 | 0.9300 |
C1—O2 | 1.332 (3) | C8—C9 | 1.368 (4) |
C1—C2 | 1.523 (3) | C8—H8 | 0.9300 |
C2—C3 | 1.537 (3) | C9—H9 | 0.9300 |
C2—H2 | 0.9800 | C10—O10 | 1.236 (3) |
O2—C12 | 1.445 (3) | C10—C11 | 1.505 (3) |
C3—C4 | 1.509 (3) | C11—H11A | 0.9600 |
C3—H3A | 0.9700 | C11—H11B | 0.9600 |
C3—H3B | 0.9700 | C11—H11C | 0.9600 |
C4—C6 | 1.375 (3) | C12—H12A | 0.9600 |
C4—C5 | 1.389 (3) | C12—H12B | 0.9600 |
C5—C7 | 1.377 (4) | C12—H12C | 0.9600 |
C5—H5 | 0.9300 | O5—H51 | 0.8547 |
| | | |
C10—N1—C2 | 121.0 (2) | C4—C6—H6 | 119.5 |
C10—N1—H1 | 120.4 | C8—C6—H6 | 119.5 |
C2—N1—H1 | 118.0 | C9—C7—C5 | 120.1 (3) |
O1—C1—O2 | 123.7 (2) | C9—C7—H7 | 119.9 |
O1—C1—C2 | 125.8 (3) | C5—C7—H7 | 119.9 |
O2—C1—C2 | 110.5 (2) | C9—C8—C6 | 120.2 (3) |
N1—C2—C1 | 110.85 (19) | C9—C8—H8 | 119.9 |
N1—C2—C3 | 110.5 (2) | C6—C8—H8 | 119.9 |
C1—C2—C3 | 108.5 (2) | C8—C9—C7 | 119.7 (3) |
N1—C2—H2 | 109.0 | C8—C9—H9 | 120.2 |
C1—C2—H2 | 109.0 | C7—C9—H9 | 120.2 |
C3—C2—H2 | 109.0 | O10—C10—N1 | 121.4 (2) |
C1—O2—C12 | 115.7 (2) | O10—C10—C11 | 122.2 (2) |
C4—C3—C2 | 113.4 (2) | N1—C10—C11 | 116.3 (2) |
C4—C3—H3A | 108.9 | C10—C11—H11A | 109.5 |
C2—C3—H3A | 108.9 | C10—C11—H11B | 109.5 |
C4—C3—H3B | 108.9 | H11A—C11—H11B | 109.5 |
C2—C3—H3B | 108.9 | C10—C11—H11C | 109.5 |
H3A—C3—H3B | 107.7 | H11A—C11—H11C | 109.5 |
C6—C4—C5 | 118.1 (2) | H11B—C11—H11C | 109.5 |
C6—C4—C3 | 121.9 (2) | O2—C12—H12A | 109.5 |
C5—C4—C3 | 120.0 (2) | O2—C12—H12B | 109.5 |
C7—C5—C4 | 121.0 (2) | H12A—C12—H12B | 109.5 |
C7—C5—H5 | 119.5 | O2—C12—H12C | 109.5 |
C4—C5—H5 | 119.5 | H12A—C12—H12C | 109.5 |
C4—C6—C8 | 120.9 (2) | H12B—C12—H12C | 109.5 |
| | | |
C10—N1—C2—C1 | −78.8 (3) | C2—C3—C4—C5 | −82.9 (3) |
C10—N1—C2—C3 | 160.8 (2) | C6—C4—C5—C7 | −0.4 (4) |
O1—C1—C2—N1 | −38.1 (4) | C3—C4—C5—C7 | 179.4 (2) |
O2—C1—C2—N1 | 144.9 (2) | C5—C4—C6—C8 | 1.0 (4) |
O1—C1—C2—C3 | 83.5 (3) | C3—C4—C6—C8 | −178.7 (2) |
O2—C1—C2—C3 | −93.6 (2) | C4—C5—C7—C9 | −0.1 (4) |
O1—C1—O2—C12 | −3.3 (4) | C4—C6—C8—C9 | −1.2 (4) |
C2—C1—O2—C12 | 173.9 (2) | C6—C8—C9—C7 | 0.7 (4) |
N1—C2—C3—C4 | −72.0 (3) | C5—C7—C9—C8 | 0.0 (4) |
C1—C2—C3—C4 | 166.3 (2) | C2—N1—C10—O10 | −3.3 (3) |
C2—C3—C4—C6 | 96.8 (3) | C2—N1—C10—C11 | 177.7 (2) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O5 | 0.88 | 2.11 | 2.983 (3) | 171 |
O5—H51···O10i | 0.85 | 1.91 | 2.753 (2) | 168 |
C11—H11B···O10i | 0.96 | 2.88 | 3.679 (4) | 142 |
C12—H12B···O10ii | 0.96 | 2.84 | 3.477 (3) | 125 |
C11—H11C···O1iii | 0.96 | 2.92 | 3.351 (4) | 109 |
C5—H5···CG1iv | 0.93 | 2.82 | 3.66 (4) | 151 |
C12—H12C···CG1ii | 0.96 | 2.62 | 3.44 (5) | 143 |
Symmetry codes: (i) −y+1, −x, −z+1/2; (ii) x−1, y, z; (iii) −y, −x, −z+1/2; (iv) −x+1/2, y+1/2, −z+1/4. |
(IIb)
N-Acetyl-
L-phenylalanine methyl ester hemihydrate
top
Crystal data top
2(C12H15NO3)·H2O | Dx = 1.291 Mg m−3 |
Mr = 460.52 | Mo Kα radiation, λ = 0.71073 Å |
Tetragonal, P41212 | Cell parameters from 2051 reflections |
a = 7.0900 (1) Å | θ = 2.9–27.5° |
c = 47.1426 (5) Å | µ = 0.10 mm−1 |
V = 2369.77 (5) Å3 | T = 150 K |
Z = 4 | Prism, colourless |
F(000) = 984 | 0.36 × 0.35 × 0.20 mm |
Data collection top
KappaCCD diffractometer | 1674 independent reflections |
Radiation source: fine-focus sealed tube | 1570 reflections with I > 2σ(I) |
Horizontally mounted graphite crystal monochromator | Rint = 0.013 |
Detector resolution: 9 pixels mm-1 | θmax = 27.4°, θmin = 3.6° |
ω scans at χ = 55 deg | h = −9→9 |
Absorption correction: multi-scan HKL DENZO and SCALEPACK (Otwinowski & Minor, 1997) | k = −6→6 |
Tmin = 0.967, Tmax = 0.981 | l = −59→60 |
6431 measured reflections | |
Refinement top
Refinement on F2 | 0 restraints |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.035 | w = 1/[σ2(Fo2) + (0.0431P)2 + 0.7149P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.093 | (Δ/σ)max < 0.001 |
S = 1.08 | Δρmax = 0.20 e Å−3 |
1674 reflections | Δρmin = −0.24 e Å−3 |
151 parameters | |
Crystal data top
2(C12H15NO3)·H2O | Z = 4 |
Mr = 460.52 | Mo Kα radiation |
Tetragonal, P41212 | µ = 0.10 mm−1 |
a = 7.0900 (1) Å | T = 150 K |
c = 47.1426 (5) Å | 0.36 × 0.35 × 0.20 mm |
V = 2369.77 (5) Å3 | |
Data collection top
KappaCCD diffractometer | 1674 independent reflections |
Absorption correction: multi-scan HKL DENZO and SCALEPACK (Otwinowski & Minor, 1997) | 1570 reflections with I > 2σ(I) |
Tmin = 0.967, Tmax = 0.981 | Rint = 0.013 |
6431 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.035 | 0 restraints |
wR(F2) = 0.093 | H-atom parameters constrained |
S = 1.08 | Δρmax = 0.20 e Å−3 |
1674 reflections | Δρmin = −0.24 e Å−3 |
151 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
N1 | 0.1604 (2) | 0.1277 (2) | 0.21825 (3) | 0.0197 (3) | |
H1 | 0.1776 | 0.0112 | 0.2261 | 0.024* | |
C1 | −0.1600 (2) | 0.1749 (2) | 0.19980 (4) | 0.0207 (3) | |
O1 | −0.2433 (2) | 0.1105 (2) | 0.21969 (3) | 0.0345 (4) | |
C2 | 0.0465 (2) | 0.1374 (2) | 0.19275 (3) | 0.0187 (3) | |
H2 | 0.0947 | 0.2421 | 0.1805 | 0.022* | |
O2 | −0.23874 (17) | 0.28341 (19) | 0.17975 (3) | 0.0240 (3) | |
C3 | 0.0583 (2) | −0.0493 (3) | 0.17603 (4) | 0.0214 (4) | |
H3A | 0.0342 | −0.1557 | 0.1891 | 0.026* | |
H3B | −0.0418 | −0.0506 | 0.1614 | 0.026* | |
C4 | 0.2471 (2) | −0.0785 (2) | 0.16184 (3) | 0.0194 (3) | |
C5 | 0.2838 (3) | 0.0066 (2) | 0.13569 (4) | 0.0229 (4) | |
H5 | 0.1891 | 0.0812 | 0.1269 | 0.027* | |
C6 | 0.3876 (2) | −0.1871 (2) | 0.17435 (4) | 0.0218 (4) | |
H6 | 0.3642 | −0.2477 | 0.1920 | 0.026* | |
C7 | 0.4570 (3) | −0.0165 (3) | 0.12240 (4) | 0.0260 (4) | |
H7 | 0.4797 | 0.0411 | 0.1045 | 0.031* | |
C8 | 0.5621 (3) | −0.2076 (3) | 0.16123 (4) | 0.0247 (4) | |
H8 | 0.6581 | −0.2796 | 0.1702 | 0.030* | |
C9 | 0.5973 (3) | −0.1238 (3) | 0.13521 (4) | 0.0260 (4) | |
H9 | 0.7161 | −0.1396 | 0.1262 | 0.031* | |
C10 | 0.2145 (2) | 0.2860 (2) | 0.23166 (4) | 0.0202 (3) | |
O10 | 0.1758 (2) | 0.44422 (18) | 0.22200 (3) | 0.0271 (3) | |
C11 | 0.3291 (3) | 0.2605 (3) | 0.25812 (4) | 0.0267 (4) | |
H11A | 0.4634 | 0.2725 | 0.2536 | 0.032* | |
H11B | 0.3048 | 0.1351 | 0.2661 | 0.032* | |
H11C | 0.2938 | 0.3571 | 0.2720 | 0.032* | |
C12 | −0.4397 (3) | 0.3113 (3) | 0.18263 (4) | 0.0269 (4) | |
H12A | −0.4851 | 0.3918 | 0.1672 | 0.032* | |
H12B | −0.4665 | 0.3721 | 0.2009 | 0.032* | |
H12C | −0.5040 | 0.1891 | 0.1818 | 0.032* | |
O5 | 0.22252 (17) | −0.22252 (17) | 0.2500 | 0.0221 (4) | |
H51 | 0.3404 | −0.2120 | 0.2570 | 0.026* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
N1 | 0.0206 (7) | 0.0178 (7) | 0.0207 (7) | 0.0015 (5) | −0.0020 (6) | −0.0008 (6) |
C1 | 0.0213 (8) | 0.0203 (8) | 0.0205 (8) | 0.0001 (6) | −0.0001 (7) | −0.0027 (7) |
O1 | 0.0265 (7) | 0.0487 (9) | 0.0283 (7) | 0.0045 (6) | 0.0075 (6) | 0.0121 (7) |
C2 | 0.0188 (8) | 0.0183 (8) | 0.0188 (7) | −0.0004 (6) | −0.0001 (6) | −0.0022 (6) |
O2 | 0.0180 (6) | 0.0282 (7) | 0.0259 (6) | 0.0027 (5) | 0.0003 (5) | 0.0043 (5) |
C3 | 0.0187 (8) | 0.0227 (9) | 0.0227 (8) | −0.0014 (6) | −0.0004 (7) | −0.0041 (7) |
C4 | 0.0218 (8) | 0.0177 (8) | 0.0188 (7) | −0.0019 (6) | 0.0003 (6) | −0.0052 (6) |
C5 | 0.0258 (9) | 0.0208 (9) | 0.0221 (8) | 0.0017 (7) | −0.0028 (7) | −0.0012 (7) |
C6 | 0.0242 (9) | 0.0230 (9) | 0.0180 (7) | −0.0010 (7) | −0.0004 (7) | −0.0002 (6) |
C7 | 0.0307 (10) | 0.0268 (10) | 0.0205 (8) | −0.0031 (7) | 0.0025 (7) | 0.0010 (7) |
C8 | 0.0213 (9) | 0.0269 (9) | 0.0259 (8) | 0.0022 (7) | −0.0038 (7) | −0.0023 (7) |
C9 | 0.0213 (9) | 0.0302 (10) | 0.0264 (9) | −0.0015 (8) | 0.0038 (7) | −0.0058 (7) |
C10 | 0.0175 (8) | 0.0220 (8) | 0.0212 (8) | −0.0016 (7) | 0.0027 (6) | −0.0047 (7) |
O10 | 0.0342 (7) | 0.0187 (6) | 0.0285 (6) | 0.0012 (5) | −0.0030 (6) | −0.0034 (5) |
C11 | 0.0296 (9) | 0.0274 (9) | 0.0232 (8) | −0.0014 (7) | −0.0037 (7) | −0.0039 (7) |
C12 | 0.0188 (8) | 0.0268 (9) | 0.0350 (10) | 0.0024 (7) | −0.0012 (7) | −0.0002 (8) |
O5 | 0.0201 (5) | 0.0201 (5) | 0.0259 (8) | 0.0015 (7) | −0.0030 (5) | −0.0030 (5) |
Geometric parameters (Å, º) top
N1—C10 | 1.344 (2) | C6—C8 | 1.391 (2) |
N1—C2 | 1.450 (2) | C6—H6 | 0.9500 |
N1—H1 | 0.9131 | C7—C9 | 1.390 (3) |
C1—O1 | 1.198 (2) | C7—H7 | 0.9500 |
C1—O2 | 1.340 (2) | C8—C9 | 1.385 (3) |
C1—C2 | 1.525 (2) | C8—H8 | 0.9500 |
C2—C3 | 1.543 (2) | C9—H9 | 0.9500 |
C2—H2 | 1.0000 | C10—O10 | 1.241 (2) |
O2—C12 | 1.445 (2) | C10—C11 | 1.500 (2) |
C3—C4 | 1.511 (2) | C11—H11A | 0.9800 |
C3—H3A | 0.9900 | C11—H11B | 0.9800 |
C3—H3B | 0.9900 | C11—H11C | 0.9800 |
C4—C6 | 1.390 (2) | C12—H12A | 0.9800 |
C4—C5 | 1.397 (2) | C12—H12B | 0.9800 |
C5—C7 | 1.388 (3) | C12—H12C | 0.9800 |
C5—H5 | 0.9500 | O5—H51 | 0.9024 |
| | | |
C10—N1—C2 | 120.6 (1) | C4—C6—H6 | 119.8 |
C10—N1—H1 | 121.8 | C8—C6—H6 | 119.8 |
C2—N1—H1 | 117.0 | C5—C7—C9 | 120.1 (2) |
O1—C1—O2 | 124.4 (2) | C5—C7—H7 | 120.0 |
O1—C1—C2 | 125.2 (2) | C9—C7—H7 | 120.0 |
O2—C1—C2 | 110.3 (1) | C9—C8—C6 | 120.6 (2) |
N1—C2—C1 | 111.2 (1) | C9—C8—H8 | 119.7 |
N1—C2—C3 | 110.7 (1) | C6—C8—H8 | 119.7 |
C1—C2—C3 | 108.2 (1) | C8—C9—C7 | 119.4 (2) |
N1—C2—H2 | 108.9 | C8—C9—H9 | 120.3 |
C1—C2—H2 | 108.9 | C7—C9—H9 | 120.3 |
C3—C2—H2 | 108.9 | O10—C10—N1 | 121.3 (2) |
C1—O2—C12 | 115.0 (1) | O10—C10—C11 | 122.3 (2) |
C4—C3—C2 | 113.0 (1) | N1—C10—C11 | 116.4 (2) |
C4—C3—H3A | 109.0 | C10—C11—H11A | 109.5 |
C2—C3—H3A | 109.0 | C10—C11—H11B | 109.5 |
C4—C3—H3B | 109.0 | H11A—C11—H11B | 109.5 |
C2—C3—H3B | 109.0 | C10—C11—H11C | 109.5 |
H3A—C3—H3B | 107.8 | H11A—C11—H11C | 109.5 |
C6—C4—C5 | 118.7 (2) | H11B—C11—H11C | 109.5 |
C6—C4—C3 | 121.5 (2) | O2—C12—H12A | 109.5 |
C5—C4—C3 | 119.8 (2) | O2—C12—H12B | 109.5 |
C7—C5—C4 | 120.8 (2) | H12A—C12—H12B | 109.5 |
C7—C5—H5 | 119.6 | O2—C12—H12C | 109.5 |
C4—C5—H5 | 119.6 | H12A—C12—H12C | 109.5 |
C4—C6—C8 | 120.4 (2) | H12B—C12—H12C | 109.5 |
| | | |
C10—N1—C2—C1 | −78.6 (2) | C2—C3—C4—C5 | −82.5 (2) |
C10—N1—C2—C3 | 161.0 (2) | C6—C4—C5—C7 | 0.0 (3) |
O1—C1—C2—N1 | −37.8 (2) | C3—C4—C5—C7 | 179.3 (2) |
O2—C1—C2—N1 | 145.3 (1) | C5—C4—C6—C8 | 1.1 (3) |
O1—C1—C2—C3 | 84.0 (2) | C3—C4—C6—C8 | −178.2 (2) |
O2—C1—C2—C3 | −93.0 (2) | C4—C5—C7—C9 | −0.6 (3) |
O1—C1—O2—C12 | −3.4 (3) | C4—C6—C8—C9 | −1.5 (3) |
C2—C1—O2—C12 | 173.6 (1) | C6—C8—C9—C7 | 0.9 (3) |
N1—C2—C3—C4 | −71.7 (2) | C5—C7—C9—C8 | 0.2 (3) |
C1—C2—C3—C4 | 166.2 (1) | C2—N1—C10—O10 | −3.1 (2) |
C2—C3—C4—C6 | 96.8 (2) | C2—N1—C10—C11 | 179.0 (2) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O5 | 0.91 | 2.03 | 2.932 (2) | 170 |
O5—H51···O10i | 0.90 | 1.84 | 2.727 (2) | 168 |
C11—H11B···O10i | 0.98 | 2.89 | 3.609 (2) | 131 |
C12—H12B···O10ii | 0.98 | 2.77 | 3.430 (2) | 125 |
C11—H11A···O1iii | 0.98 | 2.86 | 3.689 (2) | 143 |
C5—H5···CG1iv | 0.95 | 2.80 | 3.66 (4) | 152 |
C12—H12C···CG1ii | 0.98 | 2.53 | 3.35 (4) | 142 |
Symmetry codes: (i) −y+1, −x, −z+1/2; (ii) x−1, y, z; (iii) x+1, y, z; (iv) −x+1/2, y+1/2, −z+1/4. |
Experimental details
| (Ia) | (Ib) | (IIa) | (IIb) |
Crystal data |
Chemical formula | C12H15NO3 | C12H15NO3 | 2(C12H15NO3)·H2O | 2(C12H15NO3)·H2O |
Mr | 221.25 | 221.25 | 460.52 | 460.52 |
Crystal system, space group | Orthorhombic, P212121 | Orthorhombic, P212121 | Tetragonal, P41212 | Tetragonal, P41212 |
Temperature (K) | 293 | 150 | 293 | 150 |
a, b, c (Å) | 4.9910 (1), 8.7145 (2), 28.0411 (7) | 4.9488 (2), 8.6359 (6), 27.6622 (10) | 7.1582 (1), 7.1582 (1), 47.5286 (6) | 7.0900 (1), 7.0900 (1), 47.1426 (5) |
α, β, γ (°) | 90, 90, 90 | 90, 90, 90 | 90, 90, 90 | 90, 90, 90 |
V (Å3) | 1219.62 (5) | 1182.21 (10) | 2435.36 (6) | 2369.77 (5) |
Z | 4 | 4 | 4 | 4 |
Radiation type | Mo Kα | Mo Kα | Mo Kα | Mo Kα |
µ (mm−1) | 0.09 | 0.09 | 0.09 | 0.10 |
Crystal size (mm) | 0.32 × 0.20 × 0.16 | 0.32 × 0.20 × 0.16 | 0.32 × 0.12 × 0.12 | 0.36 × 0.35 × 0.20 |
|
Data collection |
Diffractometer | KappaCCD diffractometer | KappaCCD diffractometer | KappaCCD diffractometer | KappaCCD diffractometer |
Absorption correction | Multi-scan HKL DENZO and SCALEPACK (Otwinowski & Minor, 1997) | Multi-scan HKL DENZO and SCALEPACK (Otwinowski & Minor, 1997) | Multi-scan HKL DENZO and SCALEPACK (Otwinowski & Minor, 1997) | Multi-scan HKL DENZO and SCALEPACK (Otwinowski & Minor, 1997) |
Tmin, Tmax | 0.973, 0.986 | 0.972, 0.986 | 0.971, 0.989 | 0.967, 0.981 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 8443, 1656, 1126 | 8592, 2019, 1736 | 11430, 1738, 1270 | 6431, 1674, 1570 |
Rint | 0.025 | 0.028 | 0.026 | 0.013 |
(sin θ/λ)max (Å−1) | 0.649 | 0.705 | 0.650 | 0.648 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.042, 0.116, 0.98 | 0.039, 0.096, 1.04 | 0.045, 0.119, 1.06 | 0.035, 0.093, 1.08 |
No. of reflections | 1656 | 2019 | 1738 | 1674 |
No. of parameters | 151 | 150 | 152 | 151 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement | H atoms treated by a mixture of independent and constrained refinement | H-atom parameters constrained | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.14, −0.17 | 0.20, −0.20 | 0.17, −0.17 | 0.20, −0.24 |