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The structure of the title compound, [Th(C5H3N2O2)4(H2O)2]·3H2O, contains monomeric mol­ecules composed of a thorium(IV) ion coordinated by N,O-chelating groups donated by four pyrazine-2-carboxyl­ate ligands [mean Th—N = 2.773 (30) Å and mean Th—O = 2.391 (17) Å] and two water O atoms [mean Th—O = 2.517 (30) Å]. The coordination polyhedron around the ThIV ion is an irregular hexa­deca­hedron.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536805039346/bv6020sup1.cif
Contains datablocks global, I

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S1600536805039346/bv6020Isup2.hkl
Contains datablock I

CCDC reference: 248793

Key indicators

  • Single-crystal X-ray study
  • T = 293 K
  • Mean [sigma](C-C) = 0.012 Å
  • R factor = 0.042
  • wR factor = 0.124
  • Data-to-parameter ratio = 14.9

checkCIF/PLATON results

No syntax errors found



Alert level B PLAT029_ALERT_3_B _diffrn_measured_fraction_theta_full Low ....... 0.95 PLAT731_ALERT_1_B Bond Calc 0.84(9), Rep 0.84(2) ...... 4.50 su-Rat O2 -H21 1.555 1.555 PLAT735_ALERT_1_B D-H Calc 0.84(9), Rep 0.84(2) ...... 4.50 su-Rat O2 -H21 1.555 1.555
Alert level C PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ? PLAT125_ALERT_4_C No _symmetry_space_group_name_Hall Given ....... ? PLAT199_ALERT_1_C Check the Reported _cell_measurement_temperature 293 K PLAT200_ALERT_1_C Check the Reported _diffrn_ambient_temperature . 293 K PLAT220_ALERT_2_C Large Non-Solvent N Ueq(max)/Ueq(min) ... 2.56 Ratio PLAT342_ALERT_3_C Low Bond Precision on C-C bonds (x 1000) Ang ... 12 PLAT417_ALERT_2_C Short Inter D-H..H-D H301 .. H401 .. 2.10 Ang. PLAT731_ALERT_1_C Bond Calc 0.84(8), Rep 0.85(2) ...... 4.00 su-Rat O1 -H11 1.555 1.555 PLAT735_ALERT_1_C D-H Calc 0.84(8), Rep 0.85(2) ...... 4.00 su-Rat O1 -H11 1.555 1.555 PLAT736_ALERT_1_C H...A Calc 1.87(10), Rep 1.87(3) ...... 3.33 su-Rat H21 -O12 1.555 1.655 PLAT751_ALERT_4_C Bond Calc 0.86000, Rep 0.856(5) ...... Senseless su O1 -H12 1.555 1.555 PLAT751_ALERT_4_C Bond Calc 0.83000, Rep 0.825(6) ...... Senseless su O3 -H301 1.555 1.555 PLAT751_ALERT_4_C Bond Calc 0.83000, Rep 0.832(6) ...... Senseless su O3 -H302 1.555 1.555 PLAT751_ALERT_4_C Bond Calc 0.91000, Rep 0.908(12) ...... Senseless su O4 -H402 1.555 1.555 PLAT751_ALERT_4_C Bond Calc 0.89000, Rep 0.888(9) ...... Senseless su O4 -H401 1.555 1.555 PLAT751_ALERT_4_C Bond Calc 0.85000, Rep 0.849(12) ...... Senseless su O5 -H502 1.555 1.555 PLAT751_ALERT_4_C Bond Calc 0.85000, Rep 0.848(13) ...... Senseless su O5 -H501 1.555 1.555
Alert level G ABSTM02_ALERT_3_G The ratio of expected to reported Tmax/Tmin(RR) is > 1.50 Tmin and Tmax reported: 0.240 0.379 Tmin and Tmax expected: 0.143 0.351 RR = 1.563 Please check that your absorption correction is appropriate.
0 ALERT level A = In general: serious problem 3 ALERT level B = Potentially serious problem 17 ALERT level C = Check and explain 1 ALERT level G = General alerts; check 8 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 2 ALERT type 2 Indicator that the structure model may be wrong or deficient 3 ALERT type 3 Indicator that the structure quality may be low 8 ALERT type 4 Improvement, methodology, query or suggestion

Comment top

The structures and properties of divalent 3d transition metal complexes with the pyrazine-2-carboxylate ligand still attract much interest. In contrast, the structure of only one complex with the trivalent LaIII ion has been reported (Leciejewicz et al., 2004). Its structure is polymeric, with three bridging pathways via the pyrazine-2-carboxylate ligands.

The structure of a complex with a tetravalent ion, ThIV, is described here. It contains monomeric molecules in which four pyrazine-2-carboxylate ligands are chelated to a ThIV ion using their N,O-bonding groups. Two water O atoms complete the ten-coordination. Fig. 1 shows the complex molecule with the ligand and atom numbering, and Fig. 2 is a packing diagram.

Each acid ligand is almost coplanar since the relevant r.m.s. deviations from the mean plane are 0.027 (1), 0.049 (1), 0.073 (1) and 0.040 (1) Å for the ligands PYR1, PYR2, PYR3 and PYR4, respectively. The dihedral angles between ligand planes are PYR1/PYR2 = 63.0 (2)°, PYR2/PYR3 = 78.0 (2)°, PYR3/PYR4 = 75.9 (2)° and PYR4/PYR1 = 34.0 (2)°. The bond lengths and bond angles in the ligands are close to those reported for pyrazine-2-carboxylate acid (Takusagawa et al., 1974).

The coordination polyhedron around the ThIV ion is an irregular decahexahedron and the geometry is composed of two monocapped square pyramids rotated by ca 45° around O21—Th—N41 axis [O21—Th—N41 = 171.28 (18)°].

Fig. 3 shows the atom alignment in the polyhedron viewed along the O21—Th—N41 axis. The base of the upper pyramid consists of atoms N11, N21, N31 and O2; its apex is atom O21. The base of the lower pyramid is formed by atoms O11, O31, O41 and O1, the apex being atom N41. The bond distances and bond angles observed within this polyhedron are listed in Table 1.

The same coordination geometry has been reported in the structure of the ThIV complex with pyridine-2,6-dicarboxylate and water, in which the metal ion is coordinated by the O,O',N-bonding groups donated by two pyridine-2,6-dicarboxylate ligands and four water O atoms, forming a monomeric molecule (Degetto et al., 1978).

Experimental top

An aqueous solution of thorium nitrate pentahydrate (0.570 g in 25 ml) was added to a solution of pyrazine-2,3-dicarboxylic acid (0.745 g in 25 ml H2O) and 10% hydrazine hydrate (2 ml). The pH of the resulting solution was mantained at 3 by adding a few drops of 10% hydrazine hydrate. After concentration over a steam bath to one-half of the initial volume, the turbid solution was filtered and the clear filtrate was left for crystallization at room temperature. Pale-yellow plate-shaped crystals were found in the mother liquid after a week. They were washed with a cold (1:1) water–ethanol mixture and dried in air.

Refinement top

The positions of H atoms attached to the coordinated water O atoms (O1 and O2) and to the solvation water O atoms (O3, O4 and O5) were not observed directly in Fourier maps. To insert them and construct the hydrogen-bond network, the method of Nardelli (1999) as implemented in the WinGX software (Faruggia, 1999) has been adopted. The full structure of (I) was then refined using constraints on the O—H distances and H—O—H angles [please specify values]. The hydrogen bonds listed in Table 2 have reasonable geometric parameters, so they can be considered as physical. Pyrazine ring H atoms were inserted by HFIX, each at a distance of 0.93 Å from the respective C atom, and refined adopting a riding model. Small intensities of reflections in the range of large Bragg scattering angles resulted in a completeness factor of 0.95.

Computing details top

Data collection: KM-4 Software (Kuma, 1996); cell refinement: KM-4 Software; data reduction: DATAPROC (Kuma, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: XP (Siemens, 1992); software used to prepare material for publication: SHELXL97.

Figures top
[Figure 1] Fig. 1. The molecule of (I) with ligand and atom labelling schemes. Non-H atoms are shown as 50% probability displacement ellipsoids. For clarity, ligand molecules are marked as PYR1, PYR2, PYR3 and PYR4.
[Figure 2] Fig. 2. The packing diagram of (I). Solvation water O atoms are marked as O3, O4 and O5.
[Figure 3] Fig. 3. The coordination polyhedron around the ThIV ion in (I), viewed along the O21—Th—N41 axis.
Diaquatetrakis(pyrazine-2-carboxylato-κ2O,N)thorium(IV) trihydrate top
Crystal data top
[Th(C5H3N2O2)4(H2O)2]·3H2OF(000) = 1568
Mr = 814.50Dx = 1.968 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
a = 7.9080 (16) ÅCell parameters from 25 reflections
b = 18.014 (4) Åθ = 6–15°
c = 19.391 (4) ŵ = 5.50 mm1
β = 95.70 (3)°T = 293 K
V = 2748.7 (10) Å3Rectangular plate, pale yellow
Z = 40.41 × 0.31 × 0.19 mm
Data collection top
Kuma KM-4
diffractometer
4872 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.067
Graphite monochromatorθmax = 30.1°, θmin = 1.6°
ω/2θ scansh = 011
Absorption correction: analytical
(CrysAlis RED; Oxford Diffraction, 2000)
k = 025
Tmin = 0.241, Tmax = 0.379l = 2626
7144 measured reflections3 standard reflections every 200 reflections
5768 independent reflections intensity decay: 9.7%
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.042Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.124H atoms treated by a mixture of independent and constrained refinement
S = 1.10 w = 1/[σ2(Fo2) + (0.0835P)2 + 2.9776P]
where P = (Fo2 + 2Fc2)/3
5768 reflections(Δ/σ)max = 0.002
388 parametersΔρmax = 1.54 e Å3
13 restraintsΔρmin = 3.93 e Å3
Crystal data top
[Th(C5H3N2O2)4(H2O)2]·3H2OV = 2748.7 (10) Å3
Mr = 814.50Z = 4
Monoclinic, P21/nMo Kα radiation
a = 7.9080 (16) ŵ = 5.50 mm1
b = 18.014 (4) ÅT = 293 K
c = 19.391 (4) Å0.41 × 0.31 × 0.19 mm
β = 95.70 (3)°
Data collection top
Kuma KM-4
diffractometer
4872 reflections with I > 2σ(I)
Absorption correction: analytical
(CrysAlis RED; Oxford Diffraction, 2000)
Rint = 0.067
Tmin = 0.241, Tmax = 0.3793 standard reflections every 200 reflections
7144 measured reflections intensity decay: 9.7%
5768 independent reflections
Refinement top
R[F2 > 2σ(F2)] = 0.04213 restraints
wR(F2) = 0.124H atoms treated by a mixture of independent and constrained refinement
S = 1.10Δρmax = 1.54 e Å3
5768 reflectionsΔρmin = 3.93 e Å3
388 parameters
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
Th11.03088 (3)0.943782 (13)0.253092 (13)0.02560 (9)
N110.9713 (8)0.8032 (3)0.2023 (3)0.0312 (13)
C120.8124 (10)0.7804 (4)0.2022 (4)0.0344 (16)
C130.7640 (12)0.7096 (5)0.1793 (5)0.047 (2)
H130.65150.69510.18060.056*
N120.8727 (11)0.6618 (5)0.1555 (5)0.060 (2)
C151.0309 (13)0.6856 (5)0.1557 (5)0.053 (2)
H151.11050.65390.13920.063*
C161.0843 (11)0.7551 (5)0.1793 (4)0.0419 (19)
H161.19780.76860.17930.050*
C170.6878 (9)0.8349 (4)0.2270 (4)0.0312 (14)
O110.7433 (7)0.8987 (3)0.2420 (3)0.0341 (11)
O120.5403 (7)0.8137 (3)0.2305 (4)0.0458 (15)
N210.9077 (10)0.9384 (4)0.1146 (4)0.0413 (16)
C221.0214 (12)0.9177 (5)0.0712 (4)0.0411 (18)
C230.9713 (14)0.9059 (7)0.0004 (5)0.060 (3)
H231.05390.89240.02810.072*
N220.8153 (13)0.9129 (7)0.0272 (5)0.068 (3)
C250.7009 (16)0.9340 (7)0.0170 (6)0.064 (3)
H250.58790.94060.00020.077*
C260.7470 (13)0.9457 (6)0.0858 (5)0.056 (3)
H260.66360.95930.11390.068*
C271.2021 (11)0.9092 (6)0.1019 (5)0.046 (2)
O211.2227 (7)0.9143 (3)0.1680 (3)0.0386 (12)
O221.3152 (9)0.8966 (5)0.0658 (4)0.070 (2)
N311.2036 (9)1.0643 (4)0.2043 (4)0.0352 (14)
N321.3387 (10)1.1983 (5)0.1615 (4)0.0457 (18)
C321.1049 (9)1.1227 (4)0.1864 (4)0.0318 (15)
C331.1724 (11)1.1898 (5)0.1655 (4)0.0395 (18)
H331.09971.22950.15420.047*
C351.4358 (10)1.1374 (6)0.1780 (5)0.046 (2)
H351.55251.14010.17550.056*
C361.3656 (11)1.0709 (5)0.1985 (5)0.046 (2)
H361.43631.03020.20820.055*
C370.9172 (9)1.1132 (4)0.1891 (4)0.0320 (15)
O310.8742 (7)1.0537 (3)0.2205 (3)0.0349 (11)
O320.8185 (8)1.1597 (4)0.1625 (4)0.062 (2)
N410.8422 (7)0.9956 (3)0.3582 (3)0.0266 (12)
C420.9275 (10)1.0386 (4)0.4055 (4)0.0304 (15)
C430.8550 (11)1.0694 (5)0.4612 (5)0.0394 (18)
H430.92041.09890.49290.047*
N420.6925 (9)1.0568 (4)0.4696 (4)0.0379 (15)
C450.6056 (10)1.0161 (4)0.4228 (4)0.0365 (17)
H450.49081.00800.42670.044*
C460.6785 (10)0.9842 (4)0.3673 (4)0.0361 (17)
H460.61230.95460.33600.043*
C471.1119 (11)1.0529 (5)0.3943 (4)0.0370 (16)
O411.1650 (7)1.0177 (3)0.3436 (3)0.0381 (12)
O421.1934 (9)1.0973 (5)0.4307 (4)0.071 (3)
O11.0106 (7)0.8497 (3)0.3499 (3)0.0413 (13)
H111.079 (11)0.814 (4)0.357 (6)0.062*
H120.92740.83280.37020.062*
O21.3021 (8)0.8844 (4)0.2961 (3)0.0432 (14)
H211.364 (12)0.861 (5)0.271 (5)0.065*
H221.323 (14)0.881 (6)0.3398 (13)0.065*
O30.4182 (8)0.8464 (4)0.4251 (3)0.0514 (16)
H3010.52170.84300.43550.077*
H3020.40300.86470.46340.077*
O40.7484 (13)0.7966 (6)0.4160 (6)0.131 (5)
H4020.72660.75450.39100.197*
H4010.72890.77010.45300.197*
O50.920 (2)0.7488 (7)0.5269 (7)0.172 (7)
H5020.88930.70710.54170.258*
H5010.90020.77890.55870.258*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Th10.01934 (12)0.02827 (12)0.03041 (13)0.00152 (10)0.00859 (8)0.00275 (11)
N110.023 (3)0.032 (3)0.039 (3)0.005 (2)0.007 (2)0.006 (3)
C120.028 (4)0.038 (4)0.038 (4)0.001 (3)0.008 (3)0.004 (3)
C130.042 (5)0.038 (4)0.060 (6)0.001 (4)0.008 (4)0.021 (4)
N120.058 (5)0.040 (4)0.083 (6)0.002 (4)0.021 (5)0.023 (4)
C150.052 (6)0.045 (5)0.065 (6)0.018 (4)0.022 (5)0.009 (4)
C160.038 (4)0.043 (4)0.047 (5)0.009 (4)0.016 (4)0.002 (4)
C170.025 (3)0.039 (4)0.031 (4)0.004 (3)0.008 (3)0.002 (3)
O110.028 (3)0.034 (3)0.041 (3)0.006 (2)0.008 (2)0.008 (2)
O120.027 (3)0.047 (3)0.066 (4)0.003 (2)0.016 (3)0.014 (3)
N210.039 (4)0.054 (4)0.032 (3)0.005 (3)0.008 (3)0.001 (3)
C220.045 (5)0.044 (4)0.036 (4)0.004 (4)0.015 (4)0.001 (3)
C230.055 (6)0.090 (8)0.038 (5)0.011 (6)0.018 (4)0.008 (5)
N220.052 (6)0.093 (7)0.057 (6)0.004 (5)0.003 (4)0.009 (5)
C250.047 (6)0.094 (9)0.052 (6)0.014 (6)0.001 (5)0.008 (6)
C260.038 (5)0.082 (7)0.048 (5)0.010 (5)0.002 (4)0.005 (5)
C270.036 (4)0.060 (5)0.044 (5)0.006 (4)0.019 (4)0.000 (4)
O210.027 (3)0.049 (3)0.042 (3)0.001 (2)0.011 (2)0.007 (3)
O220.048 (4)0.119 (7)0.048 (4)0.011 (4)0.025 (3)0.017 (4)
N310.027 (3)0.039 (3)0.042 (4)0.003 (3)0.012 (3)0.000 (3)
N320.034 (4)0.056 (4)0.048 (4)0.016 (3)0.011 (3)0.003 (3)
C320.029 (4)0.033 (3)0.035 (4)0.007 (3)0.010 (3)0.000 (3)
C330.029 (4)0.043 (4)0.047 (5)0.008 (3)0.004 (3)0.003 (3)
C350.019 (3)0.063 (5)0.059 (5)0.012 (4)0.009 (3)0.001 (4)
C360.026 (4)0.051 (5)0.061 (6)0.006 (3)0.007 (4)0.007 (4)
C370.021 (3)0.030 (3)0.046 (4)0.006 (3)0.006 (3)0.010 (3)
O310.023 (3)0.037 (3)0.047 (3)0.003 (2)0.013 (2)0.002 (2)
O320.035 (3)0.052 (4)0.101 (6)0.002 (3)0.013 (3)0.029 (4)
N410.026 (3)0.024 (3)0.032 (3)0.001 (2)0.014 (2)0.002 (2)
C420.028 (4)0.031 (3)0.034 (4)0.002 (3)0.008 (3)0.002 (3)
C430.034 (4)0.048 (5)0.037 (4)0.003 (3)0.012 (3)0.008 (3)
N420.033 (4)0.047 (4)0.036 (3)0.006 (3)0.015 (3)0.000 (3)
C450.032 (4)0.036 (4)0.045 (4)0.004 (3)0.020 (3)0.002 (3)
C460.026 (4)0.034 (4)0.050 (5)0.004 (3)0.013 (3)0.002 (3)
C470.031 (4)0.043 (4)0.038 (4)0.002 (3)0.010 (3)0.004 (3)
O410.025 (3)0.047 (3)0.044 (3)0.004 (2)0.014 (2)0.012 (3)
O420.042 (4)0.095 (6)0.081 (5)0.032 (4)0.028 (4)0.057 (5)
O10.033 (3)0.041 (3)0.053 (3)0.008 (2)0.018 (3)0.003 (3)
O20.031 (3)0.059 (4)0.040 (3)0.017 (3)0.010 (2)0.004 (3)
O30.043 (4)0.061 (4)0.052 (4)0.004 (3)0.007 (3)0.013 (3)
O40.081 (7)0.148 (10)0.178 (12)0.035 (7)0.072 (8)0.095 (9)
O50.22 (2)0.121 (11)0.174 (15)0.008 (12)0.019 (14)0.018 (10)
Geometric parameters (Å, º) top
Th1—O412.369 (6)N31—C361.303 (11)
Th1—O312.388 (5)N31—C321.334 (10)
Th1—O112.405 (6)N32—C331.334 (11)
Th1—O212.409 (5)N32—C351.359 (13)
Th1—O22.466 (6)C32—C331.399 (10)
Th1—O12.545 (6)C32—C371.501 (10)
Th1—N112.742 (6)C33—H330.9300
Th1—N212.766 (7)C35—C361.395 (12)
Th1—N312.781 (6)C35—H350.9300
Th1—N412.804 (5)C36—H360.9300
N11—C121.322 (10)C37—O321.223 (9)
N11—C161.352 (9)C37—O311.295 (9)
C12—C131.392 (11)N41—C421.331 (9)
C12—C171.503 (10)N41—C461.339 (9)
C13—N121.330 (11)C42—C431.388 (10)
C13—H130.9300C42—C471.517 (11)
N12—C151.322 (13)C43—N421.331 (11)
C15—C161.384 (12)C43—H430.9300
C15—H150.9300N42—C451.308 (11)
C16—H160.9300C45—C461.394 (10)
C17—O121.235 (9)C45—H450.9300
C17—O111.254 (9)C46—H460.9300
N21—C261.343 (13)C47—O421.210 (10)
N21—C221.343 (10)C47—O411.274 (9)
C22—C231.407 (13)O1—H110.85 (2)
C22—C271.500 (14)O1—H120.856 (5)
C23—N221.301 (15)O2—H210.84 (2)
C23—H230.9300O2—H220.85 (2)
N22—C251.361 (15)O3—H3010.825 (6)
C25—C261.363 (15)O3—H3020.832 (6)
C25—H250.9300O4—H4020.908 (12)
C26—H260.9300O4—H4010.888 (9)
C27—O221.211 (10)O5—H5020.849 (12)
C27—O211.278 (10)O5—H5010.848 (13)
O41—Th1—O3185.0 (2)C22—N21—Th1115.1 (6)
O41—Th1—O11127.31 (17)N21—C22—C23120.8 (9)
O31—Th1—O1178.20 (18)N21—C22—C27116.8 (8)
O41—Th1—O21111.44 (19)C23—C22—C27122.4 (8)
O31—Th1—O21110.3 (2)N22—C23—C22123.4 (9)
O11—Th1—O21121.24 (19)N22—C23—H23118.3
O41—Th1—O271.5 (2)C22—C23—H23118.3
O31—Th1—O2149.3 (2)C23—N22—C25115.5 (9)
O11—Th1—O2131.8 (2)N22—C25—C26121.9 (11)
O21—Th1—O263.3 (2)N22—C25—H25119.0
O41—Th1—O183.3 (2)C26—C25—H25119.0
O31—Th1—O1132.72 (17)N21—C26—C25122.8 (10)
O11—Th1—O173.3 (2)N21—C26—H26118.6
O21—Th1—O1116.63 (19)C25—C26—H26118.6
O2—Th1—O165.1 (2)O22—C27—O21124.3 (9)
O41—Th1—N11146.5 (2)O22—C27—C22121.3 (9)
O31—Th1—N11127.2 (2)O21—C27—C22114.3 (7)
O11—Th1—N1161.86 (17)C27—O21—Th1132.5 (5)
O21—Th1—N1169.35 (19)C36—N31—C32117.5 (7)
O2—Th1—N1180.4 (2)C36—N31—Th1128.4 (6)
O1—Th1—N1168.2 (2)C32—N31—Th1114.1 (5)
O41—Th1—N21145.9 (2)C33—N32—C35115.5 (7)
O31—Th1—N2169.4 (2)N31—C32—C33121.8 (7)
O11—Th1—N2170.3 (2)N31—C32—C37117.2 (6)
O21—Th1—N2160.8 (2)C33—C32—C37121.0 (7)
O2—Th1—N21121.6 (2)N32—C33—C32121.5 (8)
O1—Th1—N21130.6 (2)N32—C33—H33119.3
N11—Th1—N2165.6 (2)C32—C33—H33119.3
O41—Th1—N3167.3 (2)N32—C35—C36122.0 (7)
O31—Th1—N3161.43 (19)N32—C35—H35119.0
O11—Th1—N31136.5 (2)C36—C35—H35119.0
O21—Th1—N3164.8 (2)N31—C36—C35121.7 (8)
O2—Th1—N3190.8 (2)N31—C36—H36119.2
O1—Th1—N31147.1 (2)C35—C36—H36119.2
N11—Th1—N31132.19 (19)O32—C37—O31125.4 (7)
N21—Th1—N3180.5 (2)O32—C37—C32120.0 (7)
O41—Th1—N4160.34 (17)O31—C37—C32114.6 (6)
O31—Th1—N4167.46 (18)C37—O31—Th1131.1 (4)
O11—Th1—N4167.08 (18)C42—N41—C46115.5 (6)
O21—Th1—N41171.28 (18)C42—N41—Th1115.1 (4)
O2—Th1—N41113.98 (19)C46—N41—Th1129.4 (5)
O1—Th1—N4166.95 (17)N41—C42—C43123.2 (7)
N11—Th1—N41118.96 (17)N41—C42—C47115.4 (6)
N21—Th1—N41123.8 (2)C43—C42—C47121.4 (7)
N31—Th1—N41107.61 (17)N42—C43—C42120.4 (8)
C12—N11—C16117.4 (7)N42—C43—H43119.8
C12—N11—Th1114.6 (5)C42—C43—H43119.8
C16—N11—Th1128.0 (5)C45—N42—C43117.3 (7)
N11—C12—C13121.1 (7)N42—C45—C46122.5 (7)
N11—C12—C17116.8 (7)N42—C45—H45118.8
C13—C12—C17122.1 (7)C46—C45—H45118.8
N12—C13—C12122.4 (9)N41—C46—C45121.2 (8)
N12—C13—H13118.8N41—C46—H46119.4
C12—C13—H13118.8C45—C46—H46119.4
C15—N12—C13115.7 (8)O42—C47—O41125.6 (8)
N12—C15—C16123.5 (8)O42—C47—C42119.5 (7)
N12—C15—H15118.3O41—C47—C42114.9 (7)
C16—C15—H15118.3C47—O41—Th1133.9 (5)
N11—C16—C15119.9 (8)Th1—O1—H11123 (8)
N11—C16—H16120.1Th1—O1—H12133.2
C15—C16—H16120.1H11—O1—H1299
O12—C17—O11125.5 (7)Th1—O2—H21124 (8)
O12—C17—C12117.9 (7)Th1—O2—H22116 (8)
O11—C17—C12116.5 (6)H21—O2—H22119 (10)
C17—O11—Th1129.6 (4)H301—O3—H30292.3
C26—N21—C22115.5 (8)H402—O4—H40186.8
C26—N21—Th1128.9 (6)H502—O5—H501103.9
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O1—H11···N32i0.85 (2)2.22 (6)2.994 (9)152 (10)
O1—H12···O40.861.862.718 (10)179
O2—H21···O12ii0.84 (2)1.87 (3)2.696 (8)167 (11)
O2—H22···O3ii0.85 (2)1.86 (5)2.668 (9)159 (11)
O3—H301···O40.832.052.783 (12)148
O3—H302···N42iii0.832.112.886 (9)155
O4—H402···O32iv0.912.012.919 (14)179
O4—H401···O50.892.012.574 (19)120
O5—H502···O22v0.852.032.871 (15)174
O5—H501···O42vi0.852.363.051 (15)138
Symmetry codes: (i) x+5/2, y1/2, z+1/2; (ii) x+1, y, z; (iii) x+1, y+2, z+1; (iv) x+3/2, y1/2, z+1/2; (v) x1/2, y+3/2, z+1/2; (vi) x+2, y+2, z+1.

Experimental details

Crystal data
Chemical formula[Th(C5H3N2O2)4(H2O)2]·3H2O
Mr814.50
Crystal system, space groupMonoclinic, P21/n
Temperature (K)293
a, b, c (Å)7.9080 (16), 18.014 (4), 19.391 (4)
β (°) 95.70 (3)
V3)2748.7 (10)
Z4
Radiation typeMo Kα
µ (mm1)5.50
Crystal size (mm)0.41 × 0.31 × 0.19
Data collection
DiffractometerKuma KM-4
diffractometer
Absorption correctionAnalytical
(CrysAlis RED; Oxford Diffraction, 2000)
Tmin, Tmax0.241, 0.379
No. of measured, independent and
observed [I > 2σ(I)] reflections
7144, 5768, 4872
Rint0.067
(sin θ/λ)max1)0.705
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.042, 0.124, 1.10
No. of reflections5768
No. of parameters388
No. of restraints13
H-atom treatmentH atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å3)1.54, 3.93

Computer programs: KM-4 Software (Kuma, 1996), KM-4 Software, DATAPROC (Kuma, 2001), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), XP (Siemens, 1992), SHELXL97.

Selected geometric parameters (Å, º) top
Th1—O412.369 (6)Th1—O12.545 (6)
Th1—O312.388 (5)Th1—N112.742 (6)
Th1—O112.405 (6)Th1—N212.766 (7)
Th1—O212.409 (5)Th1—N312.781 (6)
Th1—O22.466 (6)Th1—N412.804 (5)
O41—Th1—O3185.0 (2)O31—Th1—N3161.43 (19)
O41—Th1—O183.3 (2)O11—Th1—N31136.5 (2)
O11—Th1—O173.3 (2)O2—Th1—N3190.8 (2)
O2—Th1—O165.1 (2)O41—Th1—N4160.34 (17)
O2—Th1—N1180.4 (2)O21—Th1—N41171.28 (18)
N11—Th1—N2165.6 (2)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O1—H11···N32i0.85 (2)2.22 (6)2.994 (9)152 (10)
O1—H12···O40.8561.862.718 (10)179
O2—H21···O12ii0.84 (2)1.87 (3)2.696 (8)167 (11)
O2—H22···O3ii0.85 (2)1.86 (5)2.668 (9)159 (11)
O3—H301···O40.832.052.783 (12)148
O3—H302···N42iii0.832.112.886 (9)155
O4—H402···O32iv0.912.012.919 (14)179
O4—H401···O50.892.012.574 (19)120
O5—H502···O22v0.852.032.871 (15)174
O5—H501···O42vi0.852.363.051 (15)138
Symmetry codes: (i) x+5/2, y1/2, z+1/2; (ii) x+1, y, z; (iii) x+1, y+2, z+1; (iv) x+3/2, y1/2, z+1/2; (v) x1/2, y+3/2, z+1/2; (vi) x+2, y+2, z+1.
 

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