Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536803016350/cf6274sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536803016350/cf6274Isup2.hkl |
CCDC reference: 222862
Four molar equivalents of oxalyl chloride (2.29 g, 18.1 mmol) were added dropwise to a stirred solution of (2,4-dichlorophenoxy)acetic acid (1.0 g, 4.5 mmol) and a catalytic amount of dry pyridine (dried over KOH) in 20 ml dry dichloromethane (dried over molecular sieves). After stirring for 30 min, the solvent was removed under reduced pressure, yielding a yellow solution of (2,4-dichlorophenoxy)acetic chloride. This solution was then added dropwise to a stirred solution of 2-amino-4,6-dimethylpyridine (0.55 g, 4.5 mmol) and triethylamine (0.46 g, 4.5 mmol) in 20 ml dry dichloromethane. After 30 min, the solution was filtered and the solvent removed under reduced pressure, yielding a white powder. The product was purified using column chromatography (SiO2) and collected in the eluted ethyl acetate fraction after initial chloroform elutions. The solid product was further washed with 30 ml cold ethanol to afford 0.82 g of (I) (81%); m.p. 435–436 K; 1H NMR (CDCl3, 250 MHz): δ (p.p.m.) 2.33 (s, 3H, CH3), 2.42 (s, 3H, CH3), 4.62 (s, 2H, CH2), 6.77 (s, 1H, Ar—H), 6.89 (d, J 8.8, 1H, Ar—H), 7.33 (d, J 8.8, 1H, Ar—H), 7.41 (d, J 2.5, 1H, py—H), 7.87 (s, 1H, py—H), 8.89 (bs, 1H, NH); m/z 325 (MH+, 100%), 327 (MH+, 75%). Crystals suitable for X-ray diffraction studies were grown from ethyl acetate.
All H atoms were included in the refinement at calculated positions, as riding atoms, with N—H set to 0.87 Å and C—H set to 0.97 (CH3), 0.98 (CH2) or 0.94 Å (Ar—H); the isotropic displacement parameters were set at 1.25 times Ueq of the carrier atom.
Data collection: DIF4 (Stoe & Cie, 1990); cell refinement: DIF4; data reduction: REDU4 (Stoe & Cie, 1990); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: PLATON97 (Spek, 1997); software used to prepare material for publication: SHELXL97.
Fig. 1. The molecular configuration and atom-numbering scheme for the title compound, showing 50% probability displacement ellipsoids. |
C15H14Cl2N2O2 | F(000) = 336 |
Mr = 325.18 | Dx = 1.413 Mg m−3 |
Triclinic, P1 | Melting point: 435 K |
a = 7.445 (5) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 8.790 (6) Å | Cell parameters from 22 reflections |
c = 12.549 (7) Å | θ = 15–16° |
α = 89.28 (4)° | µ = 0.43 mm−1 |
β = 87.08 (5)° | T = 220 K |
γ = 68.74 (4)° | Prism, colourless |
V = 764.4 (9) Å3 | 0.70 × 0.47 × 0.38 mm |
Z = 2 |
Stoe Stadi-4 diffractometer | Rint = 0.019 |
Radiation source: fine-focus sealed tube | θmax = 25.0°, θmin = 2.9° |
Graphite monochromator | h = −8→8 |
ω/θ scans | k = −10→10 |
3678 measured reflections | l = 0→14 |
2570 independent reflections | 3 standard reflections every 60 min |
2032 reflections with I > 2σ(I) | intensity decay: 3% |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.039 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.109 | H-atom parameters constrained |
S = 1.05 | w = 1/[σ2(Fo2) + (0.062P)2 + 0.1634P] where P = (Fo2 + 2Fc2)/3 |
2570 reflections | (Δ/σ)max < 0.001 |
196 parameters | Δρmax = 0.20 e Å−3 |
0 restraints | Δρmin = −0.30 e Å−3 |
C15H14Cl2N2O2 | γ = 68.74 (4)° |
Mr = 325.18 | V = 764.4 (9) Å3 |
Triclinic, P1 | Z = 2 |
a = 7.445 (5) Å | Mo Kα radiation |
b = 8.790 (6) Å | µ = 0.43 mm−1 |
c = 12.549 (7) Å | T = 220 K |
α = 89.28 (4)° | 0.70 × 0.47 × 0.38 mm |
β = 87.08 (5)° |
Stoe Stadi-4 diffractometer | Rint = 0.019 |
3678 measured reflections | 3 standard reflections every 60 min |
2570 independent reflections | intensity decay: 3% |
2032 reflections with I > 2σ(I) |
R[F2 > 2σ(F2)] = 0.039 | 0 restraints |
wR(F2) = 0.109 | H-atom parameters constrained |
S = 1.05 | Δρmax = 0.20 e Å−3 |
2570 reflections | Δρmin = −0.30 e Å−3 |
196 parameters |
Geometry. Mean plane data ex SHELXL97 for molecule (I) ############################################ Least-squares planes (x,y,z in crystal coordinates) and deviations from them (* indicates atom used to define plane) 7.0686 (0.0066) x + 5.4322 (0.0078) y − 0.8081 (0.0113) z = 7.1858 (0.0137) * 0.0021 (0.0015) C1 * 0.0030 (0.0015) C2 * −0.0054 (0.0015) C3 * 0.0026 (0.0015) C4 * 0.0025 (0.0016) C5 * −0.0049 (0.0016) C6 Rms deviation of fitted atoms = 0.0036 6.9084 (0.0065) x + 5.8475 (0.0075) y − 0.9470 (0.0110) z = 7.1684 (0.0180) Angle to previous plane (with approximate e.s.d.) = 3.64 (0.09) * −0.0066 (0.0014) C12 * 0.0035 (0.0013) N13 * 0.0025 (0.0015) C14 * −0.0053 (0.0015) C15 * 0.0024 (0.0015) C16 * 0.0034 (0.0014) C17 Rms deviation of fitted atoms = 0.0042 |
x | y | z | Uiso*/Ueq | ||
C1 | 0.7680 (3) | 0.4768 (3) | 0.02870 (16) | 0.0350 (5) | |
C2 | 0.6560 (3) | 0.6291 (3) | 0.07107 (16) | 0.0379 (5) | |
Cl2 | 0.64800 (11) | 0.65788 (8) | 0.20750 (5) | 0.0635 (2) | |
C3 | 0.5510 (3) | 0.7546 (3) | 0.00706 (17) | 0.0400 (5) | |
H3 | 0.4745 | 0.8566 | 0.0367 | 0.050* | |
C4 | 0.5601 (3) | 0.7281 (3) | −0.10125 (17) | 0.0383 (5) | |
Cl4 | 0.42869 (10) | 0.88715 (8) | −0.18233 (5) | 0.0579 (2) | |
C5 | 0.6701 (3) | 0.5784 (3) | −0.14543 (17) | 0.0446 (6) | |
H5 | 0.6749 | 0.5620 | −0.2196 | 0.056* | |
C6 | 0.7729 (3) | 0.4529 (3) | −0.08047 (17) | 0.0427 (5) | |
H6 | 0.8469 | 0.3504 | −0.1104 | 0.060 (8)* | |
O7 | 0.8631 (2) | 0.36317 (18) | 0.10017 (11) | 0.0456 (4) | |
C8 | 0.9777 (3) | 0.2030 (3) | 0.06473 (17) | 0.0384 (5) | |
H81 | 1.0773 | 0.2072 | 0.0120 | 0.047 (6)* | |
H82 | 0.8968 | 0.1527 | 0.0309 | 0.047 (7)* | |
C9 | 1.0706 (3) | 0.1029 (3) | 0.15923 (17) | 0.0365 (5) | |
O10 | 1.1621 (3) | −0.04317 (19) | 0.14712 (13) | 0.0533 (5) | |
N11 | 1.0458 (3) | 0.1869 (2) | 0.25137 (13) | 0.0365 (4) | |
H11 | 0.9797 | 0.2910 | 0.2473 | 0.046* | |
C12 | 1.1110 (3) | 0.1314 (3) | 0.35346 (16) | 0.0338 (5) | |
N13 | 1.0269 (3) | 0.2445 (2) | 0.42800 (14) | 0.0381 (4) | |
C14 | 1.0738 (3) | 0.2054 (3) | 0.52910 (17) | 0.0410 (5) | |
C15 | 1.2042 (3) | 0.0543 (3) | 0.55577 (18) | 0.0455 (6) | |
H15 | 1.2326 | 0.0305 | 0.6276 | 0.048 (7)* | |
C16 | 1.2938 (3) | −0.0629 (3) | 0.47775 (18) | 0.0418 (5) | |
C17 | 1.2448 (3) | −0.0218 (3) | 0.37256 (17) | 0.0385 (5) | |
H17 | 1.3011 | −0.0963 | 0.3164 | 0.048* | |
C18 | 0.9729 (4) | 0.3355 (3) | 0.6116 (2) | 0.0597 (7) | |
H181 | 1.0043 | 0.2913 | 0.6823 | 0.075* | |
H182 | 0.8345 | 0.3720 | 0.6046 | 0.075* | |
H183 | 1.0150 | 0.4271 | 0.6008 | 0.075* | |
C19 | 1.4333 (4) | −0.2283 (3) | 0.5054 (2) | 0.0548 (6) | |
H191 | 1.3631 | −0.2927 | 0.5375 | 0.069* | |
H192 | 1.5226 | −0.2169 | 0.5556 | 0.069* | |
H193 | 1.5044 | −0.2826 | 0.4412 | 0.069* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0377 (12) | 0.0342 (11) | 0.0317 (11) | −0.0107 (10) | −0.0064 (9) | 0.0035 (9) |
C2 | 0.0423 (12) | 0.0407 (12) | 0.0286 (11) | −0.0120 (10) | −0.0058 (9) | −0.0008 (9) |
Cl2 | 0.0839 (5) | 0.0523 (4) | 0.0327 (3) | 0.0032 (3) | −0.0157 (3) | −0.0074 (3) |
C3 | 0.0392 (12) | 0.0355 (12) | 0.0400 (12) | −0.0068 (10) | −0.0069 (10) | 0.0019 (10) |
C4 | 0.0365 (12) | 0.0418 (12) | 0.0376 (11) | −0.0147 (10) | −0.0106 (9) | 0.0116 (10) |
Cl4 | 0.0620 (4) | 0.0567 (4) | 0.0493 (4) | −0.0134 (3) | −0.0180 (3) | 0.0224 (3) |
C5 | 0.0527 (14) | 0.0517 (14) | 0.0292 (11) | −0.0184 (12) | −0.0046 (10) | 0.0042 (10) |
C6 | 0.0503 (14) | 0.0395 (12) | 0.0333 (11) | −0.0098 (11) | −0.0038 (10) | −0.0020 (10) |
O7 | 0.0599 (10) | 0.0331 (8) | 0.0318 (8) | −0.0011 (8) | −0.0127 (7) | 0.0004 (6) |
C8 | 0.0412 (12) | 0.0345 (11) | 0.0337 (11) | −0.0066 (10) | −0.0028 (9) | −0.0038 (9) |
C9 | 0.0348 (11) | 0.0374 (12) | 0.0345 (11) | −0.0093 (10) | −0.0047 (9) | −0.0023 (9) |
O10 | 0.0609 (11) | 0.0364 (9) | 0.0464 (9) | 0.0038 (8) | −0.0153 (8) | −0.0064 (7) |
N11 | 0.0429 (10) | 0.0301 (9) | 0.0319 (9) | −0.0073 (8) | −0.0051 (8) | 0.0014 (7) |
C12 | 0.0355 (11) | 0.0372 (11) | 0.0311 (10) | −0.0159 (10) | −0.0044 (9) | 0.0039 (9) |
N13 | 0.0440 (11) | 0.0389 (10) | 0.0338 (10) | −0.0177 (9) | −0.0051 (8) | 0.0010 (8) |
C14 | 0.0462 (13) | 0.0473 (13) | 0.0349 (11) | −0.0228 (11) | −0.0073 (10) | 0.0021 (10) |
C15 | 0.0486 (14) | 0.0593 (15) | 0.0343 (12) | −0.0255 (13) | −0.0098 (10) | 0.0073 (11) |
C16 | 0.0349 (12) | 0.0463 (13) | 0.0467 (13) | −0.0172 (11) | −0.0084 (10) | 0.0135 (11) |
C17 | 0.0367 (12) | 0.0399 (12) | 0.0370 (12) | −0.0115 (10) | −0.0031 (9) | 0.0029 (9) |
C18 | 0.0782 (19) | 0.0644 (17) | 0.0391 (13) | −0.0281 (16) | −0.0070 (13) | −0.0090 (12) |
C19 | 0.0472 (15) | 0.0581 (16) | 0.0546 (15) | −0.0128 (13) | −0.0153 (12) | 0.0198 (12) |
C1—O7 | 1.354 (3) | N11—C12 | 1.411 (3) |
C1—C6 | 1.385 (3) | N11—H11 | 0.87 |
C1—C2 | 1.391 (3) | C12—N13 | 1.330 (3) |
C2—C3 | 1.374 (3) | C12—C17 | 1.381 (3) |
C2—Cl2 | 1.729 (2) | N13—C14 | 1.340 (3) |
C3—C4 | 1.376 (3) | C14—C15 | 1.380 (3) |
C3—H3 | 0.94 | C14—C18 | 1.507 (3) |
C4—C5 | 1.379 (3) | C15—C16 | 1.387 (3) |
C4—Cl4 | 1.738 (2) | C15—H15 | 0.94 |
C5—C6 | 1.377 (3) | C16—C17 | 1.396 (3) |
C5—H5 | 0.94 | C16—C19 | 1.497 (3) |
C6—H6 | 0.94 | C17—H17 | 0.94 |
O7—C8 | 1.419 (3) | C18—H181 | 0.97 |
C8—C9 | 1.508 (3) | C18—H182 | 0.97 |
C8—H81 | 0.98 | C18—H183 | 0.97 |
C8—H82 | 0.98 | C19—H191 | 0.97 |
C9—O10 | 1.223 (3) | C19—H192 | 0.97 |
C9—N11 | 1.348 (3) | C19—H193 | 0.97 |
O7—C1—C6 | 125.7 (2) | C12—N11—H11 | 115.2 |
O7—C1—C2 | 115.67 (19) | N13—C12—C17 | 124.8 (2) |
C6—C1—C2 | 118.7 (2) | N13—C12—N11 | 111.47 (19) |
C3—C2—C1 | 121.4 (2) | C17—C12—N11 | 123.75 (19) |
C3—C2—Cl2 | 120.06 (17) | C12—N13—C14 | 117.3 (2) |
C1—C2—Cl2 | 118.56 (18) | N13—C14—C15 | 121.9 (2) |
C2—C3—C4 | 118.8 (2) | N13—C14—C18 | 115.8 (2) |
C2—C3—H3 | 120.6 | C15—C14—C18 | 122.3 (2) |
C4—C3—H3 | 120.6 | C14—C15—C16 | 120.7 (2) |
C5—C4—C3 | 121.1 (2) | C14—C15—H15 | 119.6 |
C5—C4—Cl4 | 120.12 (18) | C16—C15—H15 | 119.6 |
C3—C4—Cl4 | 118.79 (18) | C15—C16—C17 | 117.3 (2) |
C6—C5—C4 | 119.7 (2) | C15—C16—C19 | 121.5 (2) |
C6—C5—H5 | 120.2 | C17—C16—C19 | 121.3 (2) |
C4—C5—H5 | 120.2 | C12—C17—C16 | 118.0 (2) |
C5—C6—C1 | 120.4 (2) | C12—C17—H17 | 121.0 |
C5—C6—H6 | 119.8 | C16—C17—H17 | 121.0 |
C1—C6—H6 | 119.8 | C14—C18—H181 | 109.5 |
C1—O7—C8 | 119.76 (17) | C14—C18—H182 | 109.5 |
O7—C8—C9 | 108.97 (17) | H181—C18—H182 | 109.5 |
O7—C8—H81 | 109.9 | C14—C18—H183 | 109.5 |
C9—C8—H81 | 109.9 | H181—C18—H183 | 109.5 |
O7—C8—H82 | 109.9 | H182—C18—H183 | 109.5 |
C9—C8—H82 | 109.9 | C16—C19—H191 | 109.5 |
H81—C8—H82 | 108.3 | C16—C19—H192 | 109.5 |
O10—C9—N11 | 125.6 (2) | H191—C19—H192 | 109.5 |
O10—C9—C8 | 119.18 (19) | C16—C19—H193 | 109.5 |
N11—C9—C8 | 115.19 (18) | H191—C19—H193 | 109.5 |
C9—N11—C12 | 129.69 (18) | H192—C19—H193 | 109.5 |
C9—N11—H11 | 115.2 | ||
O7—C1—C2—C3 | −179.43 (19) | O7—C8—C9—N11 | −7.2 (3) |
C6—C1—C2—C3 | 0.1 (3) | O10—C9—N11—C12 | −1.7 (4) |
O7—C1—C2—Cl2 | −0.3 (3) | C8—C9—N11—C12 | 179.32 (19) |
C6—C1—C2—Cl2 | 179.28 (17) | C9—N11—C12—N13 | −168.0 (2) |
C1—C2—C3—C4 | −0.8 (3) | C9—N11—C12—C17 | 11.7 (3) |
Cl2—C2—C3—C4 | −179.97 (16) | C17—C12—N13—C14 | −1.1 (3) |
C2—C3—C4—C5 | 0.8 (3) | N11—C12—N13—C14 | 178.64 (17) |
C2—C3—C4—Cl4 | −179.59 (16) | C12—N13—C14—C15 | 0.2 (3) |
C3—C4—C5—C6 | 0.0 (3) | C12—N13—C14—C18 | −178.9 (2) |
Cl4—C4—C5—C6 | −179.65 (17) | N13—C14—C15—C16 | 0.7 (3) |
C4—C5—C6—C1 | −0.7 (4) | C18—C14—C15—C16 | 179.7 (2) |
O7—C1—C6—C5 | −179.9 (2) | C14—C15—C16—C17 | −0.7 (3) |
C2—C1—C6—C5 | 0.6 (3) | C14—C15—C16—C19 | −179.0 (2) |
C6—C1—O7—C8 | −0.9 (3) | N13—C12—C17—C16 | 1.1 (3) |
C2—C1—O7—C8 | 178.58 (19) | N11—C12—C17—C16 | −178.60 (19) |
C1—O7—C8—C9 | 178.64 (18) | C15—C16—C17—C12 | −0.2 (3) |
O7—C8—C9—O10 | 173.7 (2) | C19—C16—C17—C12 | 178.2 (2) |
Experimental details
Crystal data | |
Chemical formula | C15H14Cl2N2O2 |
Mr | 325.18 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 220 |
a, b, c (Å) | 7.445 (5), 8.790 (6), 12.549 (7) |
α, β, γ (°) | 89.28 (4), 87.08 (5), 68.74 (4) |
V (Å3) | 764.4 (9) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.43 |
Crystal size (mm) | 0.70 × 0.47 × 0.38 |
Data collection | |
Diffractometer | Stoe Stadi-4 diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3678, 2570, 2032 |
Rint | 0.019 |
(sin θ/λ)max (Å−1) | 0.594 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.039, 0.109, 1.05 |
No. of reflections | 2570 |
No. of parameters | 196 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.20, −0.30 |
Computer programs: DIF4 (Stoe & Cie, 1990), DIF4, REDU4 (Stoe & Cie, 1990), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), PLATON97 (Spek, 1997), SHELXL97.
A search of the April 2003 release of the Cambridge Structural Database (Allen, 2002) reveals that there are eight structures based on N-(4,6-dimethylpyridin-2-yl)carboxamide, all published by one research group. These structures are N-(4,6-dimethylpyridin-2-yl)-2-(3-nitrophenyl)acetamide (Rodier et al., 1986), N-(4,6-dimethylpyridin-2-yl)-2-(4-nitrophenyl)propionamide (Rodier, Robert & Le Bautet, 1990), (E)—N-(4,6-dimethylpyridin-2-yl)-3-phenylpropenamide hemihydrate (Rodier, Robert-Piessard & Le Baut, 1990), N-(4,6-dimethylpyridin-2-yl)-2-furamide (Rodier et al., 1991), N-(4,6-dimethylpyridin-2-yl)-2-thiophenecarboxamide (Rodier, Cense et al., 1992), N-(4,6-dimethylpyridin-2-yl)(1-methylindol-2-yl)carboxamide (Rodier, Robert & Le Baut, 1992), N-(4,6-dimethylpyridin-2-yl)-2-(3-nitrophenyl)acetamide (Rodier et al., 1993) and N-(4,6-dimethylpyridin-2-yl)-5-methylpyrazine-2-carboxamide (Rodier et al., 1994). In a series of studies on the syntheses of additional derivatives of N-(4,6-dimethylpyridin-2-yl)carboxamide and also N-(4,6-dimethylpyrimidin-2-yl)carboxamide as potential anti-inflammatory agents, we prepared the title compound, (I), and its structure is reported here.
The structure of (I) comprises an essentially flat molecule (Fig. 1) with an intramolecular hydrogen-bonding interaction from the amine N—H group to the phenoxy O atom (Table 1). Molecules of (I) are arranged in lamellar sheets parallel to the (110) plane. The dihedral angle between the substituted phenyl and pyridyl rings is 3.64 (9)°.