In the crystal structure of the title compound, C
10H
10N
3+·Cl
−·[P(O)(OH)
2H], the chloride ion and phosphorous acid form a one-dimensional hydrogen-bonded chain, while the 2-(2-pyridylamino)pyridinium cations form a second chain through π–π stacking. The two parallel chains are connected
via a PO
H—N hydrogen bond and a weak pyridinium-to-chloride interaction.
Supporting information
CCDC reference: 610731
Key indicators
- Single-crystal X-ray study
- T = 173 K
- Mean (P-O) = 0.001 Å
- Disorder in main residue
- R factor = 0.039
- wR factor = 0.110
- Data-to-parameter ratio = 12.5
checkCIF/PLATON results
No syntax errors found
Alert level B
PLAT213_ALERT_2_B Atom N3' has ADP max/min Ratio ............. 4.20 prolat
PLAT301_ALERT_3_B Main Residue Disorder ......................... 42.00 Perc.
Alert level C
PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ?
PLAT152_ALERT_1_C Supplied and Calc Volume s.u. Inconsistent ..... ?
PLAT213_ALERT_2_C Atom C13' has ADP max/min Ratio ............. 3.10 prolat
PLAT213_ALERT_2_C Atom C22' has ADP max/min Ratio ............. 3.50 oblate
PLAT213_ALERT_2_C Atom C24' has ADP max/min Ratio ............. 3.80 prolat
PLAT220_ALERT_2_C Large Non-Solvent C Ueq(max)/Ueq(min) ... 2.79 Ratio
PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 3
Cl
0 ALERT level A = In general: serious problem
2 ALERT level B = Potentially serious problem
7 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
2 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
5 ALERT type 2 Indicator that the structure model may be wrong or deficient
1 ALERT type 3 Indicator that the structure quality may be low
1 ALERT type 4 Improvement, methodology, query or suggestion
Data collection: SMART (Bruker, 2000); cell refinement: SAINT (Bruker, 2000); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: DIAMOND (Bergerhoff et al., 1996); software used to prepare material for publication: SHELXL97.
2-(2-Pyridylamino)pyridinium chloride phosphorous acid
top
Crystal data top
C10H10N3+·Cl−·H3O3P | Z = 2 |
Mr = 289.65 | F(000) = 300 |
Triclinic, P1 | Dx = 1.513 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.504 (1) Å | Cell parameters from 6685 reflections |
b = 8.840 (1) Å | θ = 2.0–30.5° |
c = 10.710 (1) Å | µ = 0.43 mm−1 |
α = 76.288 (3)° | T = 173 K |
β = 74.840 (3)° | Prism, colourless |
γ = 70.054 (3)° | 0.50 × 0.24 × 0.19 mm |
V = 635.9 (1) Å3 | |
Data collection top
Bruker SMART CCD area-detector diffractometer | 3277 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.045 |
Graphite monochromator | θmax = 30.0°, θmin = 2.0° |
φ and ω scans | h = −10→10 |
7690 measured reflections | k = −12→12 |
3650 independent reflections | l = −12→15 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.039 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.110 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0633P)2 + 0.1848P] where P = (Fo2 + 2Fc2)/3 |
3650 reflections | (Δ/σ)max = 0.001 |
293 parameters | Δρmax = 0.50 e Å−3 |
33 restraints | Δρmin = −0.56 e Å−3 |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
O1 | 0.62953 (16) | 0.77754 (16) | 0.76291 (11) | 0.0410 (3) | |
O2 | 0.90690 (15) | 0.69093 (15) | 0.57109 (11) | 0.0391 (3) | |
O3 | 0.58288 (17) | 0.74265 (17) | 0.54393 (11) | 0.0408 (3) | |
P | 0.69705 (5) | 0.79522 (4) | 0.61958 (3) | 0.02832 (11) | |
Cl | 0.83419 (5) | 1.18554 (5) | 0.33993 (4) | 0.03750 (11) | |
C10 | 0.2205 (8) | 1.0845 (7) | 0.9156 (4) | 0.0225 (6) | 0.849 (4) |
C11 | 0.2332 (7) | 1.1590 (6) | 0.7828 (4) | 0.0244 (6) | 0.849 (4) |
H11 | 0.3220 | 1.1028 | 0.7156 | 0.029* | 0.849 (4) |
C12 | 0.1151 (9) | 1.3139 (6) | 0.7527 (4) | 0.0261 (8) | 0.849 (4) |
H12 | 0.1213 | 1.3665 | 0.6640 | 0.031* | 0.849 (4) |
C13 | −0.0141 (7) | 1.3939 (6) | 0.8530 (5) | 0.0266 (8) | 0.849 (4) |
H13 | −0.0947 | 1.5025 | 0.8346 | 0.032* | 0.849 (4) |
C14 | −0.0216 (10) | 1.3109 (6) | 0.9799 (5) | 0.0278 (11) | 0.849 (4) |
H14 | −0.1139 | 1.3635 | 1.0479 | 0.033* | 0.849 (4) |
C20 | 0.3509 (5) | 0.8393 (4) | 1.0685 (3) | 0.0207 (6) | 0.849 (4) |
C21 | 0.4837 (8) | 0.6828 (6) | 1.0816 (3) | 0.0257 (7) | 0.849 (4) |
H21 | 0.5681 | 0.6408 | 1.0064 | 0.031* | 0.849 (4) |
C22 | 0.4909 (8) | 0.5907 (6) | 1.2041 (5) | 0.0301 (9) | 0.849 (4) |
H22 | 0.5802 | 0.4846 | 1.2147 | 0.036* | 0.849 (4) |
C23 | 0.3637 (13) | 0.6561 (8) | 1.3131 (4) | 0.0308 (10) | 0.849 (4) |
H23 | 0.3668 | 0.5941 | 1.3986 | 0.037* | 0.849 (4) |
C24 | 0.2358 (11) | 0.8085 (7) | 1.2967 (5) | 0.0288 (10) | 0.849 (4) |
H24 | 0.1493 | 0.8514 | 1.3710 | 0.035* | 0.849 (4) |
N1 | 0.34303 (19) | 0.93048 (15) | 0.94688 (12) | 0.0249 (3) | 0.849 (4) |
N2 | 0.0942 (6) | 1.1600 (5) | 1.0127 (3) | 0.0256 (7) | 0.849 (4) |
N3 | 0.2304 (3) | 0.8996 (2) | 1.1757 (2) | 0.0246 (4) | 0.849 (4) |
C10' | 0.128 (3) | 1.142 (2) | 0.9875 (16) | 0.014 (3) | 0.151 (4) |
C11' | −0.006 (5) | 1.300 (3) | 0.993 (3) | 0.027 (6) | 0.151 (4) |
H11' | −0.0692 | 1.3389 | 1.0734 | 0.032* | 0.151 (4) |
C12' | −0.039 (4) | 1.393 (3) | 0.874 (3) | 0.031 (6) | 0.151 (4) |
H12' | −0.1457 | 1.4892 | 0.8698 | 0.037* | 0.151 (4) |
C13' | 0.086 (5) | 1.344 (4) | 0.761 (3) | 0.028 (5) | 0.151 (4) |
H13' | 0.0771 | 1.4139 | 0.6789 | 0.033* | 0.151 (4) |
C14' | 0.224 (5) | 1.193 (3) | 0.766 (2) | 0.035 (7) | 0.151 (4) |
H14' | 0.3072 | 1.1601 | 0.6874 | 0.042* | 0.151 (4) |
C20' | 0.2608 (17) | 0.8922 (14) | 1.1419 (12) | 0.015 (2)* | 0.151 (4) |
C21' | 0.239 (5) | 0.834 (3) | 1.277 (2) | 0.027 (5) | 0.151 (4) |
H21' | 0.1522 | 0.9020 | 1.3373 | 0.032* | 0.151 (4) |
C22' | 0.342 (8) | 0.678 (4) | 1.322 (3) | 0.031 (6) | 0.151 (4) |
H22' | 0.3267 | 0.6313 | 1.4117 | 0.037* | 0.151 (4) |
C23' | 0.473 (5) | 0.595 (4) | 1.223 (2) | 0.029 (6)* | 0.151 (4) |
H23' | 0.5520 | 0.4883 | 1.2485 | 0.035* | 0.151 (4) |
C24' | 0.494 (5) | 0.657 (3) | 1.094 (2) | 0.039 (7) | 0.151 (4) |
H24' | 0.5823 | 0.5900 | 1.0336 | 0.047* | 0.151 (4) |
N1' | 0.1391 (10) | 1.0498 (9) | 1.1105 (7) | 0.0230 (17) | 0.151 (4) |
H1' | 0.057 (2) | 1.0977 (14) | 1.1800 (17) | 0.028* | 0.151 (4) |
N2' | 0.242 (3) | 1.093 (3) | 0.8814 (14) | 0.019 (3) | 0.151 (4) |
H4' | 0.322 (4) | 1.004 (4) | 0.8843 (14) | 0.022* | 0.151 (4) |
N3' | 0.394 (2) | 0.812 (2) | 1.0473 (17) | 0.026 (4) | 0.151 (4) |
H1 | 0.432 (4) | 0.883 (3) | 0.881 (2) | 0.043 (6)* | 0.849 (4) |
H4 | 0.159 (4) | 0.990 (5) | 1.153 (3) | 0.047 (9)* | 0.849 (4) |
H2 | 0.987 (4) | 0.718 (3) | 0.596 (2) | 0.050 (6)* | |
H3 | 0.458 (4) | 0.768 (3) | 0.581 (2) | 0.058 (6)* | |
H5 | 0.691 (3) | 0.942 (3) | 0.566 (2) | 0.049 (6)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.0353 (5) | 0.0543 (7) | 0.0291 (5) | −0.0037 (5) | −0.0046 (4) | −0.0152 (5) |
O2 | 0.0280 (5) | 0.0522 (7) | 0.0353 (5) | −0.0081 (5) | −0.0012 (4) | −0.0150 (5) |
O3 | 0.0323 (5) | 0.0625 (8) | 0.0306 (5) | −0.0161 (5) | −0.0036 (4) | −0.0131 (5) |
P | 0.02755 (17) | 0.02780 (18) | 0.02729 (18) | −0.00683 (13) | −0.00472 (12) | −0.00305 (12) |
Cl | 0.02738 (17) | 0.0477 (2) | 0.03562 (19) | −0.01126 (14) | −0.00377 (13) | −0.00609 (15) |
C10 | 0.0268 (13) | 0.0255 (10) | 0.0168 (15) | −0.0124 (9) | −0.0034 (12) | −0.0006 (13) |
C11 | 0.0291 (11) | 0.0216 (15) | 0.0204 (14) | −0.0065 (10) | −0.0037 (10) | −0.0024 (12) |
C12 | 0.033 (2) | 0.023 (2) | 0.0207 (10) | −0.0057 (16) | −0.0054 (9) | −0.0031 (11) |
C13 | 0.0292 (19) | 0.0237 (12) | 0.0237 (14) | −0.0054 (10) | −0.0055 (15) | −0.0014 (10) |
C14 | 0.0307 (14) | 0.0250 (14) | 0.0252 (19) | −0.0042 (10) | −0.0050 (14) | −0.0063 (12) |
C20 | 0.0222 (14) | 0.0210 (10) | 0.0192 (13) | −0.0076 (9) | −0.0023 (11) | −0.0040 (10) |
C21 | 0.0283 (18) | 0.0251 (19) | 0.0222 (9) | −0.0082 (14) | −0.0054 (8) | 0.0002 (8) |
C22 | 0.0311 (15) | 0.0276 (12) | 0.0269 (15) | −0.0062 (8) | −0.0063 (12) | 0.0012 (11) |
C23 | 0.034 (2) | 0.0275 (14) | 0.028 (2) | −0.0073 (11) | −0.010 (2) | 0.0010 (16) |
C24 | 0.0375 (14) | 0.028 (2) | 0.0211 (9) | −0.0129 (17) | −0.0060 (8) | 0.0007 (11) |
N1 | 0.0284 (6) | 0.0253 (6) | 0.0177 (6) | −0.0058 (5) | −0.0008 (4) | −0.0046 (4) |
N2 | 0.0294 (14) | 0.0254 (11) | 0.0207 (11) | −0.0070 (9) | −0.0006 (9) | −0.0077 (8) |
N3 | 0.0279 (8) | 0.0242 (8) | 0.0195 (8) | −0.0069 (6) | −0.0010 (7) | −0.0048 (7) |
C10' | 0.019 (7) | 0.008 (4) | 0.013 (7) | −0.002 (4) | −0.005 (6) | 0.000 (5) |
C11' | 0.037 (11) | 0.034 (10) | 0.016 (7) | −0.021 (8) | −0.012 (6) | 0.008 (5) |
C12' | 0.022 (6) | 0.038 (9) | 0.033 (11) | −0.015 (5) | 0.017 (5) | −0.024 (8) |
C13' | 0.023 (8) | 0.008 (7) | 0.049 (11) | 0.005 (5) | −0.017 (7) | −0.003 (5) |
C14' | 0.058 (13) | 0.037 (15) | 0.015 (6) | −0.029 (11) | −0.007 (6) | 0.009 (6) |
C21' | 0.025 (7) | 0.006 (5) | 0.046 (13) | −0.004 (5) | −0.012 (8) | 0.004 (6) |
C22' | 0.034 (11) | 0.041 (14) | 0.017 (7) | −0.010 (9) | 0.011 (6) | −0.021 (8) |
C24' | 0.028 (8) | 0.010 (6) | 0.077 (17) | 0.008 (5) | −0.025 (9) | −0.008 (8) |
N1' | 0.027 (3) | 0.018 (3) | 0.021 (3) | −0.002 (3) | −0.004 (3) | −0.006 (3) |
N2' | 0.024 (5) | 0.014 (4) | 0.015 (8) | −0.006 (3) | 0.000 (6) | 0.002 (6) |
N3' | 0.024 (7) | 0.037 (8) | 0.019 (5) | −0.013 (6) | 0.012 (4) | −0.023 (4) |
Geometric parameters (Å, º) top
O1—P | 1.473 (1) | N1—H1 | 0.91 (3) |
O2—P | 1.552 (1) | N3—H4 | 0.81 (4) |
O2—H2 | 0.84 (3) | C10'—N2' | 1.30 (2) |
O3—P | 1.556 (1) | C10'—N1' | 1.38 (2) |
O3—H3 | 0.89 (3) | C10'—C11' | 1.42 (2) |
P—H5 | 1.28 (2) | C11'—C12' | 1.37 (2) |
C10—N2 | 1.345 (5) | C11'—H11' | 0.95 |
C10—N1 | 1.379 (6) | C12'—C13' | 1.39 (2) |
C10—C11 | 1.412 (5) | C12'—H12' | 0.95 |
C11—C12 | 1.370 (5) | C13'—C14' | 1.38 (2) |
C11—H11 | 0.95 | C13'—H13' | 0.95 |
C12—C13 | 1.394 (5) | C14'—N2' | 1.35 (2) |
C12—H12 | 0.95 | C14'—H14' | 0.95 |
C13—C14 | 1.379 (5) | C20'—N3' | 1.36 (1) |
C13—H13 | 0.95 | C20'—N1' | 1.40 (1) |
C14—N2 | 1.344 (5) | C20'—C21' | 1.40 (2) |
C14—H14 | 0.95 | C20'—H4 | 0.94 (4) |
C20—N3 | 1.355 (4) | C21'—C22' | 1.37 (2) |
C20—N1 | 1.364 (3) | C21'—H21' | 0.95 |
C20—C21 | 1.403 (5) | C22'—C23' | 1.40 (2) |
C21—C22 | 1.374 (5) | C22'—H22' | 0.95 |
C21—H21 | 0.95 | C23'—C24' | 1.35 (2) |
C22—C23 | 1.404 (5) | C23'—H23' | 0.95 |
C22—H22 | 0.95 | C24'—N3' | 1.37 (2) |
C23—C24 | 1.364 (6) | C24'—H24' | 0.95 |
C23—H23 | 0.95 | N1'—H1' | 0.92 |
C24—N3 | 1.357 (5) | N2'—H4' | 0.81 |
C24—H24 | 0.95 | | |
| | | |
P—O2—H2 | 111.1 (16) | C20—N3—H4 | 110 (2) |
P—O3—H3 | 110.3 (17) | C24—N3—H4 | 130 (2) |
O1—P—O2 | 115.68 (7) | N2'—C10'—N1' | 123 (1) |
O1—P—O3 | 115.50 (7) | N2'—C10'—C11' | 125 (2) |
O2—P—O3 | 101.06 (7) | N1'—C10'—C11' | 112 (2) |
O1—P—H5 | 113 (1) | C12'—C11'—C10' | 116 (2) |
O2—P—H5 | 105 (1) | C12'—C11'—H11' | 122.1 |
O3—P—H5 | 105 (1) | C10'—C11'—H11' | 122.1 |
N2—C10—N1 | 119.0 (4) | C11'—C12'—C13' | 119 (2) |
N2—C10—C11 | 122.0 (5) | C11'—C12'—H12' | 120.6 |
N1—C10—C11 | 119.1 (4) | C13'—C12'—H12' | 120.6 |
C12—C11—C10 | 118.8 (4) | C14'—C13'—C12' | 120 (2) |
C12—C11—H11 | 120.6 | C14'—C13'—H13' | 119.8 |
C10—C11—H11 | 120.6 | C12'—C13'—H13' | 119.8 |
C11—C12—C13 | 119.6 (3) | N2'—C14'—C13' | 121 (2) |
C11—C12—H12 | 120.2 | N2'—C14'—H14' | 119.6 |
C13—C12—H12 | 120.2 | C13'—C14'—H14' | 119.6 |
C14—C13—C12 | 118.1 (3) | N3'—C20'—N1' | 121 (1) |
C14—C13—H13 | 121.0 | N3'—C20'—C21' | 125 (2) |
C12—C13—H13 | 121.0 | N1'—C20'—C21' | 114 (1) |
N2—C14—C13 | 123.7 (4) | N3'—C20'—H4 | 142 (2) |
N2—C14—H14 | 118.2 | C21'—C20'—H4 | 93 (3) |
C13—C14—H14 | 118.2 | C22'—C21'—C20' | 120 (2) |
N3—C20—N1 | 120.1 (2) | C22'—C21'—H21' | 120.0 |
N3—C20—C21 | 120.4 (3) | C20'—C21'—H21' | 120.0 |
N1—C20—C21 | 119.5 (3) | C21'—C22'—C23' | 114 (2) |
C22—C21—C20 | 119.5 (3) | C21'—C22'—H22' | 123.0 |
C22—C21—H21 | 120.3 | C23'—C22'—H22' | 123.0 |
C20—C21—H21 | 120.3 | C24'—C23'—C22' | 124 (2) |
C21—C22—C23 | 118.8 (4) | C24'—C23'—H23' | 117.8 |
C21—C22—H22 | 120.6 | C22'—C23'—H23' | 117.8 |
C23—C22—H22 | 120.6 | C23'—C24'—N3' | 123 (2) |
C24—C23—C22 | 120.1 (4) | C23'—C24'—H24' | 118.7 |
C24—C23—H23 | 119.9 | N3'—C24'—H24' | 118.7 |
C22—C23—H23 | 119.9 | C10'—N1'—C20' | 128 (1) |
N3—C24—C23 | 120.9 (4) | C10'—N1'—H1' | 116.2 |
N3—C24—H24 | 119.6 | C20'—N1'—H1' | 116.2 |
C23—C24—H24 | 119.6 | C10'—N1'—H4 | 160 (3) |
C20—N1—C10 | 127.4 (2) | H1'—N1'—H4 | 83.6 |
C20—N1—H1 | 115 (2) | C10'—N2'—C14' | 118 (2) |
C10—N1—H1 | 118 (2) | C10'—N2'—H4' | 120.8 |
C10—N2—C14 | 117.8 (4) | C14'—N2'—H4' | 120.8 |
C20—N3—C24 | 120.3 (3) | C20'—N3'—C24' | 114 (2) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1 | 0.91 (3) | 1.82 (3) | 2.720 (2) | 173 (2) |
N3—H4···N2 | 0.81 (4) | 1.89 (4) | 2.610 (4) | 147 (3) |
O2—H2···Cli | 0.84 (3) | 2.13 (3) | 2.964 (1) | 173 (2) |
O3—H3···Clii | 0.89 (3) | 2.07 (3) | 2.954 (1) | 176 (2) |
Symmetry codes: (i) −x+2, −y+2, −z+1; (ii) −x+1, −y+2, −z+1. |