The title complex, [CuCl
2(C
3H
6N
2O
2)
2], exists in the crystal structure as a monomer and possesses a crystallographically imposed center of symmetry. The Cu atom is coordinated by two Cl atoms [Cu—Cl = 2.7696 (3) Å] and four O atoms [Cu—O = 1.9484 (8) and 1.9769 (9) Å] from two chelating malonamide ligands in a distorted octahedral geometry. In the crystal structure, a three-dimensional hydrogen-bonding network is formed by intermolecular N—H
O and N—H
Cl interactions.
Supporting information
CCDC reference: 627480
Key indicators
- Single-crystal X-ray study
- T = 100 K
- Mean (C-C) = 0.002 Å
- R factor = 0.018
- wR factor = 0.041
- Data-to-parameter ratio = 19.2
checkCIF/PLATON results
No syntax errors found
Alert level C
PLAT232_ALERT_2_C Hirshfeld Test Diff (M-X) Cu1 - Cl1 .. 9.54 su
PLAT232_ALERT_2_C Hirshfeld Test Diff (M-X) Cu1 - O2 .. 5.48 su
0 ALERT level A = In general: serious problem
0 ALERT level B = Potentially serious problem
2 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
2 ALERT type 2 Indicator that the structure model may be wrong or deficient
0 ALERT type 3 Indicator that the structure quality may be low
0 ALERT type 4 Improvement, methodology, query or suggestion
0 ALERT type 5 Informative message, check
Data collection: APEX2 (Bruker, 2005); cell refinement: APEX2; data reduction: APEX2; program(s) used to solve structure: SHELXTL (Sheldrick, 1998); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Dichloro-bis(malonamide-
κ2O,
O')copper(II)
top
Crystal data top
[CuCl2(C3H6N2O2)2] | F(000) = 342 |
Mr = 338.65 | Dx = 1.929 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 6056 reflections |
a = 8.3177 (6) Å | θ = 2.8–31.3° |
b = 7.3586 (5) Å | µ = 2.34 mm−1 |
c = 10.0195 (7) Å | T = 100 K |
β = 108.101 (2)° | Prism, blue |
V = 582.91 (7) Å3 | 0.20 × 0.15 × 0.15 mm |
Z = 2 | |
Data collection top
Bruker SMART APEX2 CCD area detector diffractometer | 1517 independent reflections |
Radiation source: fine-focus sealed tube | 1446 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.023 |
φ and ω scans | θmax = 29.0°, θmin = 3.5° |
Absorption correction: multi-scan (APEX2; Bruker, 2005) | h = −11→11 |
Tmin = 0.594, Tmax = 0.704 | k = −10→10 |
7665 measured reflections | l = −13→13 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.018 | Hydrogen site location: mixed |
wR(F2) = 0.041 | H-atom parameters constrained |
S = 1.05 | w = 1/[σ2(Fo2) + (0.01P)2 + 0.55P] where P = (Fo2 + 2Fc2)/3 |
1517 reflections | (Δ/σ)max < 0.001 |
79 parameters | Δρmax = 0.43 e Å−3 |
0 restraints | Δρmin = −0.28 e Å−3 |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Cu1 | 0.0000 | 0.0000 | 0.5000 | 0.00857 (6) | |
Cl1 | 0.11620 (3) | 0.05718 (4) | 0.27260 (3) | 0.01116 (7) | |
O1 | 0.22468 (10) | 0.06546 (12) | 0.62177 (9) | 0.00995 (17) | |
O2 | 0.05914 (11) | −0.26085 (12) | 0.50815 (9) | 0.01035 (17) | |
N1 | 0.50395 (13) | 0.02996 (15) | 0.72153 (11) | 0.0112 (2) | |
H1N | 0.5149 | 0.1426 | 0.7583 | 0.013* | |
H2N | 0.5971 | −0.0346 | 0.7251 | 0.013* | |
N2 | 0.23656 (13) | −0.49997 (14) | 0.55868 (11) | 0.0104 (2) | |
H3N | 0.1496 | −0.5783 | 0.5433 | 0.012* | |
H4N | 0.3426 | −0.5412 | 0.5984 | 0.012* | |
C1 | 0.35643 (15) | −0.02773 (16) | 0.63814 (12) | 0.0084 (2) | |
C2 | 0.35889 (14) | −0.20359 (17) | 0.56200 (13) | 0.0099 (2) | |
H2A | 0.3677 | −0.1750 | 0.4680 | 0.012* | |
H2B | 0.4618 | −0.2720 | 0.6139 | 0.012* | |
C3 | 0.20755 (14) | −0.32453 (17) | 0.54380 (12) | 0.0084 (2) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Cu1 | 0.00529 (10) | 0.00571 (10) | 0.01245 (11) | 0.00027 (7) | −0.00051 (7) | −0.00025 (7) |
Cl1 | 0.00807 (12) | 0.01183 (14) | 0.01290 (13) | 0.00103 (10) | 0.00227 (9) | 0.00072 (10) |
O1 | 0.0060 (4) | 0.0100 (4) | 0.0124 (4) | 0.0003 (3) | 0.0007 (3) | −0.0007 (3) |
O2 | 0.0067 (4) | 0.0080 (4) | 0.0149 (4) | 0.0004 (3) | 0.0013 (3) | 0.0003 (3) |
N1 | 0.0067 (4) | 0.0112 (5) | 0.0140 (5) | −0.0004 (4) | 0.0009 (4) | −0.0015 (4) |
N2 | 0.0082 (4) | 0.0085 (5) | 0.0133 (5) | 0.0001 (4) | 0.0017 (4) | −0.0003 (4) |
C1 | 0.0082 (5) | 0.0083 (5) | 0.0087 (5) | −0.0009 (4) | 0.0025 (4) | 0.0018 (4) |
C2 | 0.0074 (5) | 0.0087 (5) | 0.0136 (5) | 0.0000 (4) | 0.0031 (4) | −0.0005 (4) |
C3 | 0.0090 (5) | 0.0097 (6) | 0.0066 (5) | −0.0006 (4) | 0.0024 (4) | −0.0009 (4) |
Geometric parameters (Å, º) top
Cu1—O1i | 1.9484 (8) | N1—H1N | 0.9000 |
Cu1—O1 | 1.9484 (8) | N1—H2N | 0.9000 |
Cu1—O2 | 1.9769 (9) | N2—C3 | 1.3133 (16) |
Cu1—O2i | 1.9769 (9) | N2—H3N | 0.9000 |
Cu1—Cl1 | 2.7696 (3) | N2—H4N | 0.9000 |
Cu1—Cl1i | 2.7696 (3) | C1—C2 | 1.5056 (17) |
O1—C1 | 1.2595 (14) | C2—C3 | 1.5058 (16) |
O2—C3 | 1.2637 (14) | C2—H2A | 0.9900 |
N1—C1 | 1.3217 (15) | C2—H2B | 0.9900 |
| | | |
O1i—Cu1—O1 | 180.0 | C3—N2—H4N | 120.1 |
O1i—Cu1—O2 | 87.92 (4) | H3N—N2—H4N | 119.0 |
O1—Cu1—O2 | 92.08 (4) | O1—C1—N1 | 120.45 (11) |
O1i—Cu1—O2i | 92.08 (4) | O1—C1—C2 | 123.38 (10) |
O1—Cu1—O2i | 87.92 (4) | N1—C1—C2 | 116.12 (10) |
O2—Cu1—O2i | 180.00 (5) | C3—C2—C1 | 115.27 (10) |
O1—Cu1—Cl1 | 88.03 (3) | C3—C2—H2A | 108.5 |
O2—Cu1—Cl1 | 92.04 (3) | C1—C2—H2A | 108.5 |
C1—O1—Cu1 | 124.99 (8) | C3—C2—H2B | 108.5 |
C3—O2—Cu1 | 125.48 (8) | C1—C2—H2B | 108.5 |
C1—N1—H1N | 120.7 | H2A—C2—H2B | 107.5 |
C1—N1—H2N | 118.3 | O2—C3—N2 | 121.70 (11) |
H1N—N1—H2N | 119.6 | O2—C3—C2 | 121.43 (11) |
C3—N2—H3N | 120.0 | N2—C3—C2 | 116.75 (11) |
| | | |
O2—Cu1—O1—C1 | 23.63 (10) | O1—C1—C2—C3 | −38.65 (16) |
O2i—Cu1—O1—C1 | −156.37 (10) | N1—C1—C2—C3 | 143.83 (11) |
O1i—Cu1—O2—C3 | 160.90 (10) | Cu1—O2—C3—N2 | 173.77 (9) |
O1—Cu1—O2—C3 | −19.10 (10) | Cu1—O2—C3—C2 | −10.30 (16) |
Cu1—O1—C1—N1 | 178.83 (8) | C1—C2—C3—O2 | 43.03 (16) |
Cu1—O1—C1—C2 | 1.42 (16) | C1—C2—C3—N2 | −140.85 (11) |
Symmetry code: (i) −x, −y, −z+1. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N···Cl1ii | 0.90 | 2.35 | 3.1728 (11) | 151 |
N1—H2N···Cl1iii | 0.90 | 2.38 | 3.2064 (11) | 152 |
N2—H3N···O2iv | 0.90 | 2.03 | 2.9278 (14) | 174 |
N2—H4N···Cl1v | 0.90 | 2.40 | 3.2461 (11) | 156 |
Symmetry codes: (ii) x+1/2, −y+1/2, z+1/2; (iii) −x+1, −y, −z+1; (iv) −x, −y−1, −z+1; (v) x+1/2, −y−1/2, z+1/2. |