The structure determination of the title compound, [C14H24N4](ClO4)2, indicates that intermolecular hydrogen bonds between the N atom of the aminopropyl group and an O atom of the perchlorate result in a two-dimensional layer structure. The cation has crystallographic inversion symmetry.
Supporting information
CCDC reference: 227027
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean (C-C) = 0.004 Å
- R factor = 0.049
- wR factor = 0.138
- Data-to-parameter ratio = 15.0
checkCIF/PLATON results
No syntax errors found
Alert level A
PLAT029_ALERT_3_A _diffrn_measured_fraction_theta_full Low ....... 0.92
Alert level B
PLAT430_ALERT_2_B Short Inter D...A Contact O1 .. O2 = 2.83 Ang.
Alert level C
WEIGH01_ALERT_1_C Extra text has been found in the
_refine_ls_weighting_scheme field. This should be in the
_refine_ls_weighting_details field.
Weighting scheme given as calc w = 1/[\s^2^(Fo^2^)+(0.0709P)^2^+0.8221
Weighting scheme identified as calc
PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ?
PLAT094_ALERT_2_C Ratio of Maximum / Minimum Residual Density .... 2.18
PLAT125_ALERT_4_C No _symmetry_space_group_name_Hall Given ....... ?
PLAT244_ALERT_4_C Low Solvent U(eq) as Compared to Neighbors .... Cl1
1 ALERT level A = In general: serious problem
1 ALERT level B = Potentially serious problem
5 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
2 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
2 ALERT type 2 Indicator that the structure model may be wrong or deficient
1 ALERT type 3 Indicator that the structure quality may be low
2 ALERT type 4 Improvement, methodology, query or suggestion
Data collection: SMART (Blessing, 1995); cell refinement: SMART; data reduction: SHELXTL (Sheldrick, 1997a); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997b); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997b); molecular graphics: SHELXTL (Sheldrick, 1998); software used to prepare material for publication: SHELXL97.
N,
N'-Bis(aminopropyl)-1,4-benzylidenediammonium diperchlorate
top
Crystal data top
C14H24N42+·2ClO4− | F(000) = 468 |
Mr = 447.27 | Dx = 1.519 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
a = 13.358 (3) Å | Cell parameters from 4254 reflections |
b = 7.864 (2) Å | θ = 3.1–52.0° |
c = 9.313 (2) Å | µ = 0.38 mm−1 |
β = 91.714 (3)° | T = 293 K |
V = 977.9 (4) Å3 | Block, colourless |
Z = 2 | 0.38 × 0.16 × 0.16 mm |
Data collection top
Bruker SMART CCD area-detector diffractometer | 1915 independent reflections |
Radiation source: fine-focus sealed tube | 1691 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.015 |
ω scans | θmax = 26.0°, θmin = 1.5° |
Absorption correction: multi-scan (SADABS; Bruker, 1998) | h = −16→16 |
Tmin = 0.868, Tmax = 0.941 | k = −9→4 |
4254 measured reflections | l = −10→11 |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.049 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.138 | Calculated w = 1/[σ2(Fo2) + (0.0709P)2 + 0.8221P] where P = (Fo2 + 2Fc2)/3 |
S = 1.04 | (Δ/σ)max < 0.001 |
1915 reflections | Δρmax = 0.63 e Å−3 |
128 parameters | Δρmin = −0.29 e Å−3 |
0 restraints | Extinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.035 (4) |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on all data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
N1 | 0.15125 (17) | 0.9734 (4) | 0.1722 (3) | 0.0627 (7) | |
N2 | 0.36637 (15) | 0.9651 (3) | 0.2013 (2) | 0.0435 (5) | |
H2A | 0.3072 | 0.9985 | 0.2325 | 0.065* | |
H2B | 0.4118 | 1.0454 | 0.2202 | 0.065* | |
H2C | 0.3847 | 0.8692 | 0.2455 | 0.065* | |
C1 | −0.09545 (19) | 0.9521 (4) | 0.5346 (4) | 0.0582 (7) | |
H1 | −0.1600 | 0.9201 | 0.5576 | 0.070* | |
C2 | −0.06226 (19) | 0.9220 (4) | 0.4008 (3) | 0.0575 (7) | |
H2 | −0.1044 | 0.8686 | 0.3335 | 0.069* | |
C3 | 0.03356 (18) | 0.9694 (4) | 0.3621 (3) | 0.0537 (7) | |
C4 | 0.0655 (2) | 0.9377 (4) | 0.2165 (3) | 0.0585 (7) | |
H4 | 0.0198 | 0.8879 | 0.1520 | 0.070* | |
C5 | 0.1703 (2) | 0.9453 (5) | 0.0204 (4) | 0.0683 (9) | |
H5A | 0.1755 | 1.0543 | −0.0275 | 0.082* | |
H5B | 0.1141 | 0.8844 | −0.0235 | 0.082* | |
C6 | 0.2626 (2) | 0.8476 (5) | −0.0004 (4) | 0.0647 (8) | |
H6A | 0.2659 | 0.8183 | −0.1013 | 0.078* | |
H6B | 0.2582 | 0.7421 | 0.0530 | 0.078* | |
C7 | 0.35874 (19) | 0.9355 (4) | 0.0444 (3) | 0.0481 (6) | |
H7A | 0.4150 | 0.8665 | 0.0158 | 0.058* | |
H7B | 0.3626 | 1.0437 | −0.0051 | 0.058* | |
Cl1 | 0.37926 (4) | 0.08558 (7) | 0.63657 (6) | 0.0425 (3) | |
O1 | 0.40930 (18) | −0.0678 (3) | 0.7055 (3) | 0.0689 (6) | |
O2 | 0.46099 (15) | 0.2022 (3) | 0.6485 (3) | 0.0726 (7) | |
O3 | 0.3546 (2) | 0.0555 (4) | 0.4919 (2) | 0.0809 (7) | |
O4 | 0.29587 (16) | 0.1582 (3) | 0.7040 (3) | 0.0764 (7) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
N1 | 0.0390 (12) | 0.0830 (18) | 0.0659 (15) | 0.0021 (12) | −0.0036 (10) | −0.0157 (14) |
N2 | 0.0393 (10) | 0.0483 (11) | 0.0426 (11) | −0.0014 (9) | −0.0015 (8) | 0.0055 (9) |
C1 | 0.0298 (12) | 0.0691 (18) | 0.0756 (19) | −0.0033 (12) | −0.0020 (12) | −0.0097 (15) |
C2 | 0.0322 (12) | 0.0687 (19) | 0.0711 (19) | −0.0027 (11) | −0.0068 (12) | −0.0125 (14) |
C3 | 0.0317 (12) | 0.0576 (16) | 0.0713 (18) | 0.0039 (11) | −0.0062 (11) | −0.0060 (14) |
C4 | 0.0359 (13) | 0.0688 (19) | 0.0701 (18) | 0.0019 (12) | −0.0087 (12) | −0.0108 (15) |
C5 | 0.0551 (17) | 0.087 (2) | 0.0624 (18) | 0.0048 (16) | −0.0076 (14) | −0.0087 (17) |
C6 | 0.0576 (17) | 0.074 (2) | 0.0620 (18) | −0.0002 (15) | −0.0039 (13) | −0.0162 (15) |
C7 | 0.0461 (14) | 0.0540 (15) | 0.0444 (14) | −0.0020 (11) | 0.0058 (10) | −0.0055 (11) |
Cl1 | 0.0411 (4) | 0.0425 (4) | 0.0435 (4) | 0.0006 (2) | −0.0085 (2) | −0.0019 (2) |
O1 | 0.0823 (15) | 0.0526 (12) | 0.0709 (14) | 0.0034 (10) | −0.0095 (11) | 0.0129 (10) |
O2 | 0.0449 (11) | 0.0527 (12) | 0.1192 (19) | −0.0040 (9) | −0.0140 (11) | −0.0057 (12) |
O3 | 0.0906 (17) | 0.1066 (19) | 0.0444 (12) | −0.0045 (14) | −0.0160 (11) | −0.0008 (12) |
O4 | 0.0504 (12) | 0.0854 (17) | 0.0937 (17) | 0.0067 (12) | 0.0065 (11) | −0.0164 (14) |
Geometric parameters (Å, º) top
N1—C4 | 1.261 (4) | C4—H4 | 0.9300 |
N1—C5 | 1.460 (4) | C5—C6 | 1.471 (4) |
N2—C7 | 1.480 (3) | C5—H5A | 0.9700 |
N2—H2A | 0.8900 | C5—H5B | 0.9700 |
N2—H2B | 0.8900 | C6—C7 | 1.506 (4) |
N2—H2C | 0.8900 | C6—H6A | 0.9701 |
C1—C2 | 1.356 (4) | C6—H6B | 0.9700 |
C1—C3i | 1.394 (4) | C7—H7A | 0.9700 |
C1—H1 | 0.9300 | C7—H7B | 0.9700 |
C2—C3 | 1.391 (4) | Cl1—O3 | 1.397 (2) |
C2—H2 | 0.9300 | Cl1—O4 | 1.415 (2) |
C3—C1i | 1.394 (4) | Cl1—O1 | 1.419 (2) |
C3—C4 | 1.456 (4) | Cl1—O2 | 1.427 (2) |
| | | |
C4—N1—C5 | 118.0 (3) | N1—C5—H5B | 109.2 |
C7—N2—H2A | 109.5 | C6—C5—H5B | 109.2 |
C7—N2—H2B | 109.5 | H5A—C5—H5B | 107.9 |
H2A—N2—H2B | 109.5 | C5—C6—C7 | 115.8 (3) |
C7—N2—H2C | 109.5 | C5—C6—H6A | 108.3 |
H2A—N2—H2C | 109.5 | C7—C6—H6A | 108.3 |
H2B—N2—H2C | 109.5 | C5—C6—H6B | 108.3 |
C2—C1—C3i | 120.5 (3) | C7—C6—H6B | 108.3 |
C2—C1—H1 | 119.7 | H6A—C6—H6B | 107.4 |
C3i—C1—H1 | 119.7 | N2—C7—C6 | 112.3 (2) |
C1—C2—C3 | 121.3 (3) | N2—C7—H7A | 109.2 |
C1—C2—H2 | 119.3 | C6—C7—H7A | 109.1 |
C3—C2—H2 | 119.3 | N2—C7—H7B | 109.2 |
C2—C3—C1i | 118.2 (3) | C6—C7—H7B | 109.1 |
C2—C3—C4 | 119.5 (3) | H7A—C7—H7B | 107.9 |
C1i—C3—C4 | 122.3 (3) | O3—Cl1—O4 | 109.27 (15) |
N1—C4—C3 | 124.2 (3) | O3—Cl1—O1 | 110.32 (15) |
N1—C4—H4 | 117.9 | O4—Cl1—O1 | 110.99 (16) |
C3—C4—H4 | 117.9 | O3—Cl1—O2 | 109.99 (16) |
N1—C5—C6 | 112.2 (3) | O4—Cl1—O2 | 108.44 (14) |
N1—C5—H5A | 109.2 | O1—Cl1—O2 | 107.79 (14) |
C6—C5—H5A | 109.2 | | |
| | | |
C3i—C1—C2—C3 | −0.5 (5) | C1i—C3—C4—N1 | 1.9 (5) |
C1—C2—C3—C1i | 0.5 (5) | C4—N1—C5—C6 | −129.8 (3) |
C1—C2—C3—C4 | −178.8 (3) | N1—C5—C6—C7 | −66.6 (4) |
C5—N1—C4—C3 | −175.8 (3) | C5—C6—C7—N2 | 65.6 (4) |
C2—C3—C4—N1 | −178.8 (3) | | |
Symmetry code: (i) −x, −y+2, −z+1. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2C···O1ii | 0.89 | 2.42 | 3.176 (3) | 143 |
N2—H2C···O2iii | 0.89 | 2.33 | 2.968 (3) | 129 |
N2—H2B···O1iii | 0.89 | 2.47 | 3.199 (3) | 139 |
N2—H2B···O2iv | 0.89 | 2.20 | 2.953 (3) | 142 |
N2—H2A···N1 | 0.89 | 2.15 | 2.879 (3) | 139 |
Symmetry codes: (ii) x, −y+1/2, z−1/2; (iii) −x+1, −y+1, −z+1; (iv) x, −y+3/2, z−1/2. |