As part of molecular recognition studies on the phytohormone indole-3-acetic acid (IAA) a series of alkylated IAAs has been examined. Phenyl-ring substitution (alkyl = methyl and ethyl) at positions 4-, 6- or 7- as well as pyrrole substitution at the 2- site resulted in the six compounds which are analyzed: 2-Me-IAA, 4-Me-IAA, 6-Me-IAA, 7-Me-IAA, 4-Et-IAA and 6-Et-IAA. The structure-activity relationships investigated include those between the geometrical parameters of the molecular structures determined by X-ray analysis, the growth-promoting activities in the Avena coleoptile straight-growth bioassay and relative lipophilicities calculated from retention times on a reversed-phase HPLC column and from RF values in reversed-phase TLC. Lipophilicities are correlated with the moments of inertia, average polarizability, molecular mass, and the van der Waals radii of the ring substituents. The influence of substitution on the electronic properties of the indole ring and its geometry is discussed on the basis of the UV and 1H NMR spectra.
Supporting information
CCDC references: 141651; 141652; 141653; 141654; 141655; 141656; 141657
For all compounds, data collection: CAD4 (Enraf Nonius 1988) software; cell refinement: CAD4 (Enraf Nonius 1988) software <CELDIM> routine; data reduction: SDP (Frenz, 1982). Program(s) used to solve structure: SHELXS86 (Sheldrick,1985, 1990) for 2-Me-IAA, 4-Me-IAA, 6-Me-IAA, 7-Me-IAA, 4-Et-IAA, 6-Et-IAA; SHELX86 (Sheldrick,1985) for iaalt. For all compounds, program(s) used to refine structure: SHELX76 (Sheldrick, 1976); molecular graphics: PLATON93 (Spek, 1982, 1990) & ORTEP (Johnson, 1965), PLUTON93 (Spek 1991); software used to prepare material for publication: PLATON93 (Spek 1982, 1990).
(2-Me-IAA) 2-methyl-idole-3-acetic acid
top
Crystal data top
C11H11NO2 | F(000) = 400 |
Mr = 189.21 | Dx = 1.289 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
a = 8.542 (1) Å | Cell parameters from 25 reflections |
b = 13.408 (1) Å | θ = 7–18° |
c = 8.638 (1) Å | µ = 0.09 mm−1 |
β = 99.70 (1)° | T = 297 K |
V = 975.18 (8) Å3 | Prismatic, colourless |
Z = 4 | 0.40 × 0.15 × 0.15 mm |
Data collection top
Enraf-Nonius CAD4 diffractometer | Rint = 0.013 |
Radiation source: fine-focus sealed tube | θmax = 25°, θmin = 2° |
Graphite monochromator | h = 0→10 |
ω/2θ scans | k = 0→15 |
1920 measured reflections | l = −10→10 |
1467 independent reflections | 3 standard reflections every 87 reflections |
1052 reflections with I > 3σ(I) | intensity decay: 0.3% |
Refinement top
Refinement on F | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.039 | Hydrogen site location: difference Fourier map |
wR(F2) = 0.043 | All H-atom parameters refined except Uiso for H101, H102, H103 |
1052 reflections | Calculated w = 1.4784/[σ2(Fo) + 0.001075(Fo2)] |
168 parameters | (Δ/σ)max = 0.05 |
0 restraints | Δρmax = 0.17 e Å−3 |
0 constraints | Δρmin = −0.18 e Å−3 |
Special details top
Geometry. Bond distances, angles etc. have been calculated using the rounded
fractional coordinates. All e.s.d.'s are estimated from the variances of the
(full) variance-covariance matrix. The cell e.s.d.'s are taken into account in
the estimation of distances, angles and torsion angles |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 0.9544 (2) | −0.0794 (1) | 0.8285 (2) | 0.0583 (6) | |
O2 | 0.8698 (2) | 0.0681 (1) | 0.8907 (2) | 0.0692 (7) | |
N1 | 0.5467 (3) | 0.2278 (2) | 0.5059 (2) | 0.0568 (7) | |
C2 | 0.6732 (3) | 0.1639 (2) | 0.5051 (2) | 0.0502 (8) | |
C3 | 0.6586 (3) | 0.0868 (2) | 0.6046 (2) | 0.0468 (7) | |
C4 | 0.4384 (4) | 0.0496 (2) | 0.7716 (3) | 0.0617 (10) | |
C5 | 0.2965 (4) | 0.0862 (3) | 0.8023 (4) | 0.0774 (13) | |
C6 | 0.2313 (4) | 0.1739 (3) | 0.7354 (4) | 0.0779 (13) | |
C7 | 0.3063 (3) | 0.2276 (2) | 0.6360 (3) | 0.0667 (10) | |
C8 | 0.7676 (4) | 0.0000 (2) | 0.6379 (3) | 0.0569 (9) | |
C9 | 0.8678 (3) | 0.0001 (2) | 0.7971 (3) | 0.0446 (7) | |
C10 | 0.7939 (4) | 0.1848 (2) | 0.4057 (4) | 0.0760 (11) | |
C31 | 0.5171 (3) | 0.1024 (2) | 0.6679 (2) | 0.0483 (7) | |
C71 | 0.4486 (3) | 0.1914 (2) | 0.6023 (2) | 0.0504 (8) | |
H1 | 0.531 (3) | 0.282 (2) | 0.443 (3) | 0.078 (9)* | |
H4 | 0.485 (3) | −0.015 (2) | 0.816 (3) | 0.079 (9)* | |
H5 | 0.249 (4) | 0.052 (2) | 0.871 (3) | 0.083 (10)* | |
H6 | 0.125 (4) | 0.197 (2) | 0.762 (4) | 0.103 (11)* | |
H7 | 0.260 (4) | 0.291 (2) | 0.590 (4) | 0.095 (10)* | |
H11 | 1.017 (4) | −0.075 (2) | 0.938 (4) | 0.097 (10)* | |
H81 | 0.847 (3) | −0.0034 (19) | 0.567 (3) | 0.069 (8)* | |
H82 | 0.714 (3) | −0.062 (2) | 0.632 (3) | 0.081 (9)* | |
H101 | 0.870 (5) | 0.132 (3) | 0.401 (5) | 0.1500* | |
H102 | 0.750 (5) | 0.190 (3) | 0.295 (6) | 0.1500* | |
H103 | 0.854 (5) | 0.234 (4) | 0.430 (6) | 0.1500* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.0610 (11) | 0.0482 (10) | 0.0593 (11) | 0.0132 (8) | −0.0083 (9) | −0.0045 (7) |
O2 | 0.0845 (13) | 0.0579 (11) | 0.0543 (10) | 0.0241 (9) | −0.0194 (9) | −0.0124 (8) |
N1 | 0.0704 (14) | 0.0503 (12) | 0.0469 (11) | 0.0153 (11) | 0.0021 (11) | 0.0074 (10) |
C2 | 0.0584 (15) | 0.0511 (13) | 0.0382 (12) | 0.0034 (12) | 0.0000 (11) | −0.0028 (10) |
C3 | 0.0556 (15) | 0.0450 (12) | 0.0351 (11) | 0.0046 (10) | −0.0060 (11) | −0.0049 (9) |
C4 | 0.0748 (19) | 0.0615 (17) | 0.0470 (15) | −0.0136 (15) | 0.0048 (14) | −0.0031 (12) |
C5 | 0.075 (2) | 0.104 (3) | 0.0560 (17) | −0.029 (2) | 0.0191 (16) | −0.0158 (17) |
C6 | 0.0612 (19) | 0.108 (3) | 0.0606 (18) | 0.0063 (19) | −0.0013 (16) | −0.0189 (18) |
C7 | 0.0662 (18) | 0.083 (2) | 0.0468 (15) | 0.0159 (16) | −0.0021 (14) | −0.0108 (14) |
C8 | 0.0688 (18) | 0.0523 (15) | 0.0445 (14) | 0.0123 (14) | −0.0049 (13) | −0.0056 (12) |
C9 | 0.0464 (13) | 0.0396 (11) | 0.0462 (12) | 0.0017 (10) | 0.0032 (10) | 0.0008 (10) |
C10 | 0.084 (2) | 0.075 (2) | 0.0733 (19) | 0.0008 (16) | 0.0258 (18) | 0.0059 (16) |
C31 | 0.0557 (14) | 0.0498 (13) | 0.0346 (11) | −0.0009 (11) | −0.0063 (10) | −0.006 (1) |
C71 | 0.0536 (15) | 0.0603 (15) | 0.0338 (11) | 0.0075 (12) | −0.0029 (11) | −0.0059 (10) |
Geometric parameters (Å, º) top
O1—C9 | 1.300 (3) | C8—C9 | 1.492 (4) |
O2—C9 | 1.217 (3) | C31—C71 | 1.406 (4) |
N1—C2 | 1.380 (4) | O1—H11 | 1.01 (3) |
N1—C71 | 1.367 (3) | N1—H1 | 0.90 (3) |
C2—C3 | 1.363 (3) | C4—H4 | 1.00 (3) |
C2—C10 | 1.475 (4) | C5—H5 | 0.90 (3) |
C3—C8 | 1.488 (4) | C6—H6 | 1.02 (3) |
C3—C31 | 1.424 (4) | C7—H7 | 0.99 (3) |
C4—C5 | 1.374 (5) | C8—H81 | 0.99 (3) |
C4—C31 | 1.399 (4) | C8—H82 | 0.95 (3) |
C5—C6 | 1.385 (5) | C10—H101 | 0.97 (4) |
C6—C7 | 1.361 (4) | C10—H102 | 0.97 (5) |
C7—C71 | 1.385 (4) | C10—H103 | 0.84 (5) |
| | | |
C2—N1—C71 | 110.0 (2) | C2—N1—H1 | 122.2 (17) |
N1—C2—C3 | 108.2 (2) | C71—N1—H1 | 127.5 (17) |
N1—C2—C10 | 120.6 (2) | C5—C4—H4 | 122.8 (15) |
C3—C2—C10 | 131.1 (2) | C31—C4—H4 | 118.7 (15) |
C2—C3—C8 | 126.5 (2) | C4—C5—H5 | 117 (2) |
C2—C3—C31 | 107.7 (2) | C6—C5—H5 | 121 (2) |
C8—C3—C31 | 125.8 (2) | C5—C6—H6 | 118.3 (17) |
C5—C4—C31 | 118.5 (3) | C7—C6—H6 | 120.8 (17) |
C4—C5—C6 | 121.9 (3) | C6—C7—H7 | 121 (2) |
C5—C6—C7 | 120.9 (3) | C71—C7—H7 | 121 (2) |
C6—C7—C71 | 118.1 (3) | C3—C8—H81 | 112.9 (15) |
C3—C8—C9 | 114.9 (2) | C3—C8—H82 | 113.3 (16) |
O1—C9—O2 | 122.1 (2) | C9—C8—H81 | 102.9 (15) |
O1—C9—C8 | 114.2 (2) | C9—C8—H82 | 104.3 (16) |
O2—C9—C8 | 123.7 (2) | H81—C8—H82 | 108 (2) |
C3—C31—C4 | 134.6 (3) | C2—C10—H101 | 115 (3) |
C3—C31—C71 | 107.0 (2) | C2—C10—H102 | 113 (3) |
C4—C31—C71 | 118.4 (2) | C2—C10—H103 | 117 (3) |
N1—C71—C7 | 130.8 (2) | H101—C10—H102 | 99 (4) |
N1—C71—C31 | 107.0 (2) | H101—C10—H103 | 101 (4) |
C7—C71—C31 | 122.2 (2) | H102—C10—H103 | 108 (4) |
C9—O1—H11 | 110.0 (16) | | |
| | | |
C71—N1—C2—C3 | −1.4 (3) | C31—C4—C5—C6 | −0.9 (5) |
C71—N1—C2—C10 | 178.0 (2) | C5—C4—C31—C3 | −177.3 (3) |
C2—N1—C71—C7 | −177.7 (2) | C5—C4—C31—C71 | 1.2 (4) |
C2—N1—C71—C31 | 1.4 (3) | C4—C5—C6—C7 | −0.1 (7) |
N1—C2—C3—C8 | 179.1 (2) | C5—C6—C7—C71 | 0.8 (5) |
N1—C2—C3—C31 | 0.8 (3) | C6—C7—C71—N1 | 178.5 (3) |
C10—C2—C3—C8 | −0.2 (4) | C6—C7—C71—C31 | −0.4 (4) |
C10—C2—C3—C31 | −178.5 (3) | C3—C8—C9—O1 | 175.5 (2) |
C2—C3—C8—C9 | 108.5 (3) | C3—C8—C9—O2 | −4.5 (4) |
C31—C3—C8—C9 | −73.6 (3) | C3—C31—C71—N1 | −0.8 (2) |
C2—C3—C31—C4 | 178.6 (3) | C3—C31—C71—C7 | 178.4 (2) |
C2—C3—C31—C71 | 0.0 (9) | C4—C31—C71—N1 | −179.7 (2) |
C8—C3—C31—C4 | 0.4 (4) | C4—C31—C71—C7 | −0.5 (3) |
C8—C3—C31—C71 | −178.2 (2) | | |
(4-Me-IAA) 4-methyl-indole-3-acetic acid
top
Crystal data top
C11H11NO2 | F(000) = 400 |
Mr = 189.21 | Dx = 1.290 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
a = 8.680 (1) Å | Cell parameters from 25 reflections |
b = 7.624 (1) Å | θ = 6–18° |
c = 15.044 (1) Å | µ = 0.09 mm−1 |
β = 101.870 (6)° | T = 103 K |
V = 974.27 (8) Å3 | Prismatic, colourless |
Z = 4 | 0.50 × 0.25 × 0.20 mm |
Data collection top
Enraf-Nonius CAD4 diffractometer | Rint = 0.040 |
Radiation source: fine-focus sealed tube | θmax = 25°, θmin = 2° |
Graphite monochromator | h = 0→10 |
ω/2θ scans | k = 0→9 |
1974 measured reflections | l = −17→17 |
1619 independent reflections | 3 standard reflections every 87 reflections |
1434 reflections with I > 3σ(I) | intensity decay: 0.5% |
Refinement top
Refinement on F | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.035 | Hydrogen site location: difference Fourier map |
wR(F2) = 0.041 | All H-atom parameters refined except H1, H11 normalized |
1434 reflections | Calculated w = 1.4555/[σ2(Fo) + 0.001021(Fo2)] |
172 parameters | (Δ/σ)max = 0.005 |
0 restraints | Δρmax = 0.23 e Å−3 |
0 constraints | Δρmin = −0.24 e Å−3 |
Special details top
Geometry. Bond distances, angles etc. have been calculated using the rounded
fractional coordinates. All e.s.d.'s are estimated from the variances of the
(full) variance-covariance matrix. The cell e.s.d.'s are taken into account in
the estimation of distances, angles and torsion angles |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 0.5521 (1) | 0.2131 (1) | 1.0514 (1) | 0.0212 (3) | |
O2 | 0.5873 (1) | 0.0922 (1) | 0.9217 (1) | 0.0189 (3) | |
N1 | 0.8154 (1) | 0.4957 (2) | 0.7507 (1) | 0.0235 (4) | |
C2 | 0.6982 (2) | 0.4966 (2) | 0.7990 (1) | 0.0241 (5) | |
C3 | 0.7464 (2) | 0.4108 (2) | 0.8795 (1) | 0.0201 (4) | |
C4 | 1.0201 (2) | 0.2654 (2) | 0.9475 (1) | 0.0233 (4) | |
C5 | 1.1639 (2) | 0.2323 (2) | 0.9242 (1) | 0.0292 (5) | |
C6 | 1.1989 (2) | 0.2872 (2) | 0.8416 (1) | 0.0286 (5) | |
C7 | 1.0911 (2) | 0.3783 (2) | 0.7789 (1) | 0.0228 (4) | |
C8 | 0.6513 (2) | 0.3986 (2) | 0.9518 (1) | 0.0257 (5) | |
C9 | 0.5967 (2) | 0.2191 (2) | 0.9725 (1) | 0.0170 (4) | |
C10 | 0.9912 (2) | 0.2127 (2) | 1.0392 (1) | 0.0310 (5) | |
C31 | 0.9056 (2) | 0.3534 (2) | 0.8825 (1) | 0.0180 (4) | |
C71 | 0.9440 (2) | 0.4098 (2) | 0.8000 (1) | 0.0187 (4) | |
H1 | 0.813 (2) | 0.550 (3) | 0.6991 (13) | 0.039 (5)* | |
H2 | 0.599 (2) | 0.550 (2) | 0.7756 (11) | 0.023 (4)* | |
H5 | 1.245 (2) | 0.178 (3) | 0.9682 (12) | 0.035 (5)* | |
H6 | 1.303 (2) | 0.256 (2) | 0.8280 (11) | 0.031 (4)* | |
H7 | 1.1154 (18) | 0.417 (2) | 0.7205 (10) | 0.023 (4)* | |
H11 | 0.511 (2) | 0.112 (3) | 1.0600 (13) | 0.044 (6)* | |
H81 | 0.549 (2) | 0.463 (3) | 0.9334 (12) | 0.041 (5)* | |
H82 | 0.711 (2) | 0.449 (3) | 1.0108 (12) | 0.035 (5)* | |
H101 | 0.9035 (19) | 0.128 (2) | 1.0325 (11) | 0.026 (4)* | |
H102 | 1.085 (2) | 0.164 (3) | 1.0746 (13) | 0.045 (5)* | |
H103 | 0.953 (2) | 0.315 (3) | 1.0717 (12) | 0.041 (5)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.0347 (6) | 0.0160 (5) | 0.0172 (5) | −0.0044 (4) | 0.0150 (4) | −0.0016 (4) |
O2 | 0.0280 (5) | 0.0147 (5) | 0.0167 (5) | −0.0013 (4) | 0.0107 (4) | −0.0015 (4) |
N1 | 0.0289 (7) | 0.0256 (7) | 0.0185 (6) | 0.0015 (5) | 0.0105 (5) | 0.0071 (5) |
C2 | 0.0274 (8) | 0.0205 (8) | 0.0273 (8) | 0.0029 (6) | 0.0126 (6) | 0.0059 (6) |
C3 | 0.0319 (8) | 0.0119 (7) | 0.0202 (7) | −0.0023 (6) | 0.0142 (6) | −0.0006 (5) |
C4 | 0.0318 (8) | 0.0155 (7) | 0.0203 (7) | −0.0090 (6) | 0.0003 (6) | 0.0002 (6) |
C5 | 0.0267 (8) | 0.0221 (8) | 0.0344 (9) | −0.0057 (6) | −0.0040 (7) | 0.0064 (7) |
C6 | 0.0233 (8) | 0.0235 (8) | 0.0392 (9) | −0.0030 (6) | 0.0072 (7) | −0.0021 (7) |
C7 | 0.0266 (8) | 0.0226 (7) | 0.0214 (7) | −0.0054 (6) | 0.0104 (6) | −0.0049 (6) |
C8 | 0.0419 (9) | 0.0150 (7) | 0.0268 (8) | −0.0008 (6) | 0.0227 (7) | −0.0013 (6) |
C9 | 0.0212 (7) | 0.0170 (7) | 0.0150 (6) | 0.0018 (5) | 0.0087 (5) | 0.0007 (5) |
C10 | 0.0427 (10) | 0.0254 (9) | 0.0214 (8) | −0.0114 (8) | −0.0013 (7) | 0.0059 (7) |
C31 | 0.0300 (8) | 0.0098 (7) | 0.0157 (6) | −0.0046 (6) | 0.0079 (5) | −0.0028 (5) |
C71 | 0.0258 (8) | 0.0148 (7) | 0.0164 (7) | −0.0029 (6) | 0.0062 (5) | −0.0012 (5) |
Geometric parameters (Å, º) top
O1—C9 | 1.323 (2) | C8—C9 | 1.502 (2) |
O2—C9 | 1.2252 (19) | C31—C71 | 1.417 (2) |
N1—C2 | 1.366 (2) | O1—H11 | 0.87 (2) |
N1—C71 | 1.373 (2) | N1—H1 | 0.88 (2) |
C2—C3 | 1.364 (2) | C2—H2 | 0.952 (17) |
C3—C8 | 1.497 (2) | C5—H5 | 0.956 (19) |
C3—C31 | 1.441 (2) | C6—H6 | 0.995 (18) |
C4—C5 | 1.387 (2) | C7—H7 | 0.990 (15) |
C4—C10 | 1.507 (2) | C8—H81 | 1.003 (19) |
C4—C31 | 1.412 (2) | C8—H82 | 1.007 (19) |
C5—C6 | 1.402 (2) | C10—H101 | 0.987 (16) |
C6—C7 | 1.373 (2) | C10—H102 | 0.952 (19) |
C7—C71 | 1.398 (2) | C10—H103 | 1.01 (2) |
| | | |
C2—N1—C71 | 109.07 (14) | C2—N1—H1 | 125.7 (12) |
N1—C2—C3 | 110.10 (15) | C71—N1—H1 | 124.9 (12) |
C2—C3—C8 | 124.08 (15) | N1—C2—H2 | 121.4 (10) |
C2—C3—C31 | 106.88 (14) | C3—C2—H2 | 128.5 (10) |
C8—C3—C31 | 128.80 (14) | C4—C5—H5 | 118.5 (11) |
C5—C4—C10 | 120.72 (14) | C6—C5—H5 | 118.7 (11) |
C5—C4—C31 | 116.94 (14) | C5—C6—H6 | 118.8 (9) |
C10—C4—C31 | 122.33 (15) | C7—C6—H6 | 119.9 (9) |
C4—C5—C6 | 122.66 (15) | C6—C7—H7 | 121.4 (9) |
C5—C6—C7 | 121.23 (16) | C71—C7—H7 | 121.4 (9) |
C6—C7—C71 | 117.13 (14) | C3—C8—H81 | 111 (1) |
C3—C8—C9 | 116.86 (13) | C3—C8—H82 | 110.8 (10) |
O1—C9—O2 | 122.56 (14) | C9—C8—H81 | 101.8 (12) |
O1—C9—C8 | 112.38 (12) | C9—C8—H82 | 107.0 (12) |
O2—C9—C8 | 125.00 (14) | H81—C8—H82 | 108.8 (16) |
C3—C31—C4 | 134.39 (15) | C4—C10—H101 | 110.5 (10) |
C3—C31—C71 | 106.10 (13) | C4—C10—H102 | 109.4 (11) |
C4—C31—C71 | 119.47 (16) | C4—C10—H103 | 111.7 (11) |
N1—C71—C7 | 129.66 (14) | H101—C10—H102 | 110.8 (16) |
N1—C71—C31 | 107.85 (14) | H101—C10—H103 | 103.4 (14) |
C7—C71—C31 | 122.49 (15) | H102—C10—H103 | 111.0 (16) |
C9—O1—H11 | 111.6 (13) | | |
| | | |
C71—N1—C2—C3 | −0.6 (2) | C5—C4—C31—C71 | −2.8 (2) |
C2—N1—C71—C7 | −179.15 (15) | C10—C4—C31—C3 | −1.6 (3) |
C2—N1—C71—C31 | 0.4 (2) | C10—C4—C31—C71 | 175.75 (14) |
N1—C2—C3—C8 | 175.38 (14) | C4—C5—C6—C7 | 0.2 (2) |
N1—C2—C3—C31 | 0.60 (18) | C5—C6—C7—C71 | −1.6 (2) |
C2—C3—C8—C9 | 115.29 (18) | C6—C7—C71—N1 | −179.79 (15) |
C31—C3—C8—C9 | −71.1 (2) | C6—C7—C71—C31 | 0.7 (2) |
C2—C3—C31—C4 | 177.28 (17) | C3—C8—C9—O1 | 162.95 (14) |
C2—C3—C31—C71 | −0.36 (17) | C3—C8—C9—O2 | −19.9 (2) |
C8—C3—C31—C4 | 2.8 (3) | C3—C31—C71—N1 | 0.0 (4) |
C8—C3—C31—C71 | −174.81 (15) | C3—C31—C71—C7 | 179.56 (14) |
C10—C4—C5—C6 | −176.55 (14) | C4—C31—C71—N1 | −178.07 (14) |
C31—C4—C5—C6 | 2.0 (2) | C4—C31—C71—C7 | 1.5 (2) |
C5—C4—C31—C3 | 179.82 (18) | | |
(6-Me-IAA) 6-Methyl-indole-3-acetic acid
top
Crystal data top
C11H11NO2 | F(000) = 800 |
Mr = 189.21 | Dx = 1.304 Mg m−3 |
Orthorhombic, Pbca | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2ab | Cell parameters from 25 reflections |
a = 6.216 (1) Å | θ = 6–17° |
b = 38.627 (1) Å | µ = 0.09 mm−1 |
c = 8.031 (1) Å | T = 297 K |
V = 1928.29 (18) Å3 | Prismatic, colourless |
Z = 8 | 0.50 × 0.40 × 0.40 mm |
Data collection top
Enraf-Nonius CAD4 diffractometer | Rint = 0.050 |
Radiation source: fine-focus sealed tube | θmax = 25°, θmin = 2° |
Graphite monochromator | h = 0→7 |
ω/2θ scans | k = 0→46 |
2040 measured reflections | l = 0→9 |
1398 independent reflections | 3 standard reflections every 87 reflections |
970 reflections with I > 3σ(I) | intensity decay: 1.8% |
Refinement top
Refinement on F | 3 constraints |
Least-squares matrix: full | All H-atom parameters refined, except H101, H102, H103
parameters constrained, H1 normalized, H81, H82 riding |
R[F2 > 2σ(F2)] = 0.049 | Calculated w = 3.7308/[σ2(Fo) + 0.000000(Fo2)] |
wR(F2) = 0.041 | (Δ/σ)max = 0.05 |
970 reflections | Δρmax = 0.16 e Å−3 |
158 parameters | Δρmin = −0.19 e Å−3 |
0 restraints | |
Special details top
Geometry. Bond distances, angles etc. have been calculated using the rounded
fractional coordinates. All e.s.d.'s are estimated from the variances of the
(full) variance-covariance matrix. The cell e.s.d.'s are taken into account in
the estimation of distances, angles and torsion angles |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 0.0216 (5) | 0.5280 (1) | 1.1766 (3) | 0.0625 (11) | |
O2 | 0.1625 (4) | 0.5298 (1) | 0.9238 (3) | 0.0650 (11) | |
N1 | 0.7320 (6) | 0.5899 (1) | 0.8783 (4) | 0.0530 (14) | |
C2 | 0.5665 (6) | 0.5693 (1) | 0.9324 (4) | 0.0423 (12) | |
C3 | 0.4239 (5) | 0.5887 (1) | 1.0198 (4) | 0.0366 (11) | |
C4 | 0.4350 (7) | 0.6546 (1) | 1.0885 (5) | 0.0510 (16) | |
C5 | 0.5540 (7) | 0.6840 (1) | 1.0622 (5) | 0.0607 (17) | |
C6 | 0.7456 (7) | 0.6836 (1) | 0.9691 (5) | 0.0623 (17) | |
C7 | 0.8196 (7) | 0.6530 (1) | 0.9022 (5) | 0.0560 (16) | |
C8 | 0.2243 (5) | 0.5776 (1) | 1.1089 (4) | 0.0423 (12) | |
C9 | 0.1367 (6) | 0.5429 (1) | 1.0610 (5) | 0.0453 (12) | |
C10 | 0.8722 (8) | 0.7168 (1) | 0.9436 (6) | 0.094 (2) | |
C31 | 0.5057 (5) | 0.6232 (1) | 1.0204 (4) | 0.0394 (11) | |
C71 | 0.6987 (5) | 0.6234 (1) | 0.9290 (4) | 0.0426 (14) | |
H1 | 0.806 (6) | 0.5835 (8) | 0.812 (4) | 0.050 (14)* | |
H2 | 0.560 (5) | 0.5446 (9) | 0.907 (3) | 0.041 (10)* | |
H4 | 0.305 (5) | 0.6558 (7) | 1.148 (3) | 0.033 (9)* | |
H5 | 0.498 (5) | 0.7083 (8) | 1.111 (3) | 0.054 (10)* | |
H7 | 0.950 (6) | 0.6495 (9) | 0.839 (4) | 0.074 (13)* | |
H11 | −0.058 (7) | 0.5037 (12) | 1.141 (5) | 0.115 (16)* | |
H81 | 0.1012 (5) | 0.5967 (1) | 1.0851 (4) | 0.096 (14)* | |
H82 | 0.2598 (5) | 0.5770 (1) | 1.2405 (4) | 0.082 (12)* | |
H101 | 0.8020 (8) | 0.7376 (1) | 1.0151 (6) | 0.1500* | |
H102 | 0.8720 (8) | 0.7237 (1) | 0.8132 (6) | 0.1500* | |
H103 | 1.0356 (8) | 0.7126 (1) | 0.9844 (6) | 0.1500* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.075 (2) | 0.0618 (19) | 0.0507 (16) | −0.0250 (17) | 0.0161 (15) | −0.0061 (13) |
O2 | 0.085 (2) | 0.0646 (19) | 0.0455 (16) | −0.0251 (16) | 0.0119 (16) | −0.0136 (14) |
N1 | 0.045 (2) | 0.068 (3) | 0.046 (2) | 0.006 (2) | 0.0124 (19) | −0.0100 (19) |
C2 | 0.044 (2) | 0.045 (2) | 0.038 (2) | 0.004 (2) | −0.0024 (19) | −0.004 (2) |
C3 | 0.0353 (19) | 0.043 (2) | 0.0316 (18) | 0.0003 (19) | −0.0045 (17) | −0.0011 (17) |
C4 | 0.041 (2) | 0.056 (3) | 0.056 (3) | 0.004 (2) | 0.008 (2) | −0.003 (2) |
C5 | 0.058 (3) | 0.051 (3) | 0.073 (3) | 0.004 (2) | 0.007 (3) | −0.002 (2) |
C6 | 0.058 (3) | 0.061 (3) | 0.068 (3) | −0.010 (2) | −0.002 (3) | 0.010 (2) |
C7 | 0.043 (2) | 0.073 (3) | 0.052 (3) | −0.005 (2) | 0.007 (2) | 0.005 (2) |
C8 | 0.039 (2) | 0.044 (2) | 0.044 (2) | −0.0011 (18) | 0.0016 (18) | −0.0042 (17) |
C9 | 0.042 (2) | 0.049 (2) | 0.045 (2) | 0.0017 (19) | −0.004 (2) | 0.004 (2) |
C10 | 0.088 (4) | 0.074 (3) | 0.119 (4) | −0.030 (3) | 0.012 (3) | 0.011 (3) |
C31 | 0.0346 (19) | 0.049 (2) | 0.0345 (19) | 0.0053 (17) | 0.0002 (18) | 0.0033 (17) |
C71 | 0.039 (2) | 0.053 (3) | 0.0359 (19) | 0.001 (2) | −0.0004 (19) | 0.0030 (19) |
Geometric parameters (Å, º) top
O1—C9 | 1.306 (5) | C8—C9 | 1.497 (5) |
O2—C9 | 1.223 (5) | C31—C71 | 1.406 (4) |
N1—C2 | 1.371 (5) | O1—H11 | 1.10 (5) |
N1—C71 | 1.372 (5) | N1—H1 | 0.75 (3) |
C2—C3 | 1.356 (5) | C2—H2 | 0.98 (3) |
C3—C8 | 1.495 (5) | C4—H4 | 0.94 (3) |
C3—C31 | 1.426 (5) | C5—H5 | 1.08 (3) |
C4—C5 | 1.372 (6) | C7—H7 | 0.97 (4) |
C4—C31 | 1.401 (5) | C8—H81 | 1.080 (5) |
C5—C6 | 1.406 (6) | C8—H82 | 1.080 (5) |
C6—C7 | 1.377 (6) | C10—H101 | 1.080 (6) |
C6—C10 | 1.518 (6) | C10—H102 | 1.081 (7) |
C7—C71 | 1.385 (5) | C10—H103 | 1.079 (7) |
| | | |
C2—N1—C71 | 109.9 (3) | C2—N1—H1 | 120 (3) |
N1—C2—C3 | 109.5 (3) | C71—N1—H1 | 128 (2) |
C2—C3—C8 | 129.2 (4) | N1—C2—H2 | 122.1 (18) |
C2—C3—C31 | 106.6 (3) | C3—C2—H2 | 128.4 (18) |
C8—C3—C31 | 124.2 (3) | C5—C4—H4 | 120.1 (17) |
C5—C4—C31 | 119.2 (4) | C31—C4—H4 | 120.7 (17) |
C4—C5—C6 | 122.0 (4) | C4—C5—H5 | 119.5 (16) |
C5—C6—C7 | 120.0 (4) | C6—C5—H5 | 118.5 (16) |
C5—C6—C10 | 120.1 (4) | C6—C7—H7 | 127 (2) |
C7—C6—C10 | 119.9 (4) | C71—C7—H7 | 115 (2) |
C6—C7—C71 | 117.8 (4) | C3—C8—H81 | 107.9 (4) |
C3—C8—C9 | 115.8 (3) | C3—C8—H82 | 107.8 (3) |
O1—C9—O2 | 122.0 (4) | C9—C8—H81 | 108.0 (3) |
O1—C9—C8 | 114.3 (3) | C9—C8—H82 | 107.9 (4) |
O2—C9—C8 | 123.7 (4) | H81—C8—H82 | 109.4 (4) |
C3—C31—C4 | 134.3 (3) | C6—C10—H101 | 110.3 (5) |
C3—C31—C71 | 107.9 (3) | C6—C10—H102 | 109.8 (4) |
C4—C31—C71 | 117.8 (3) | C6—C10—H103 | 108.6 (4) |
N1—C71—C7 | 130.6 (3) | H101—C10—H102 | 109.4 (5) |
N1—C71—C31 | 106.2 (3) | H101—C10—H103 | 109.3 (5) |
C7—C71—C31 | 123.3 (4) | H102—C10—H103 | 109.4 (6) |
C9—O1—H11 | 116 (2) | | |
| | | |
C71—N1—C2—C3 | −0.5 (4) | C5—C4—C31—C71 | 0.7 (5) |
C2—N1—C71—C7 | −179.0 (4) | C4—C5—C6—C7 | −0.5 (6) |
C2—N1—C71—C31 | 0.9 (4) | C4—C5—C6—C10 | −179.9 (4) |
N1—C2—C3—C8 | −177.1 (3) | C5—C6—C7—C71 | 0.5 (6) |
N1—C2—C3—C31 | −0.2 (4) | C10—C6—C7—C71 | 179.9 (5) |
C2—C3—C8—C9 | −17.7 (5) | C6—C7—C71—N1 | 179.9 (5) |
C31—C3—C8—C9 | 166.0 (3) | C6—C7—C71—C31 | 0.0 (11) |
C2—C3—C31—C4 | −179.8 (5) | C3—C8—C9—O1 | 154.8 (3) |
C2—C3—C31—C71 | 0.7 (4) | C3—C8—C9—O2 | −27.8 (5) |
C8—C3—C31—C4 | −2.7 (6) | C3—C31—C71—N1 | −1.0 (4) |
C8—C3—C31—C71 | 177.8 (3) | C3—C31—C71—C7 | 178.9 (3) |
C31—C4—C5—C6 | −0.2 (7) | C4—C31—C71—N1 | 179.4 (3) |
C5—C4—C31—C3 | −178.8 (4) | C4—C31—C71—C7 | −0.7 (5) |
(7-Me-IAA) 7-Methyl-indole-3-acetic acid
top
Crystal data top
C11H11NO2 | F(000) = 400 |
Mr = 189.21 | Dx = 1.317 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
a = 19.353 (1) Å | Cell parameters from 25 reflections |
b = 5.074 (1) Å | θ = 6–17° |
c = 10.275 (1) Å | µ = 0.09 mm−1 |
β = 109.000 (6)° | T = 297 K |
V = 954.00 (9) Å3 | Prismatic, colorless |
Z = 4 | 0.40 × 0.30 × 0.10 mm |
Data collection top
Enraf-Nonius CAD4 diffractometer | Rint = 0.013 |
Radiation source: fine-focus sealed tube | θmax = 25°, θmin = 2° |
Graphite monochromator | h = −22→21 |
ω/2θ scans | k = 0→6 |
1988 measured reflections | l = 0→12 |
1461 independent reflections | 3 standard reflections every 87 reflections |
1038 reflections with I > 3σ(I) | intensity decay: 0.1% |
Refinement top
Refinement on F | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.041 | Hydrogen site location: difference Fourier map |
wR(F2) = 0.036 | Refall, except H1, H11 normalized |
1038 reflections | Calculated w = 2.6240/[σ2(Fo) + 0.000000(Fo2)] |
172 parameters | (Δ/σ)max = 0.05 |
0 restraints | Δρmax = 0.14 e Å−3 |
0 constraints | Δρmin = −0.15 e Å−3 |
Special details top
Geometry. Bond distances, angles etc. have been calculated using the rounded
fractional coordinates. All e.s.d.'s are estimated from the variances of the
(full) variance-covariance matrix. The cell e.s.d.'s are taken into account in
the estimation of distances, angles and torsion angles |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 0.0107 (1) | 0.7574 (4) | 0.3874 (2) | 0.0811 (6) | |
O2 | 0.0766 (1) | 0.4041 (4) | 0.4752 (2) | 0.0743 (6) | |
N1 | 0.2671 (1) | 0.2538 (4) | 0.3218 (2) | 0.0542 (6) | |
C2 | 0.1960 (1) | 0.3372 (5) | 0.2674 (3) | 0.0565 (7) | |
C3 | 0.1828 (1) | 0.5300 (5) | 0.3466 (3) | 0.0508 (6) | |
C4 | 0.2704 (1) | 0.7386 (5) | 0.5714 (3) | 0.0616 (7) | |
C5 | 0.3411 (1) | 0.7287 (6) | 0.6591 (3) | 0.0680 (7) | |
C6 | 0.3916 (1) | 0.5545 (5) | 0.6355 (3) | 0.0637 (7) | |
C7 | 0.3736 (1) | 0.3841 (5) | 0.5252 (2) | 0.0500 (6) | |
C8 | 0.1134 (1) | 0.6829 (5) | 0.3196 (3) | 0.0629 (7) | |
C9 | 0.0662 (1) | 0.5992 (5) | 0.4035 (3) | 0.0552 (7) | |
C10 | 0.4284 (2) | 0.2032 (6) | 0.4975 (3) | 0.0720 (7) | |
C31 | 0.2490 (1) | 0.5697 (5) | 0.4581 (2) | 0.0467 (6) | |
C71 | 0.3014 (1) | 0.3938 (5) | 0.4391 (2) | 0.0452 (6) | |
H1 | 0.2890 (9) | 0.1306 (15) | 0.2899 (13) | 0.0578 (16)* | |
H2 | 0.1641 (8) | 0.2645 (15) | 0.1797 (13) | 0.0567 (16)* | |
H4 | 0.2357 (8) | 0.8717 (15) | 0.5833 (13) | 0.0566 (16)* | |
H5 | 0.3579 (9) | 0.8613 (15) | 0.7394 (13) | 0.0648 (16)* | |
H6 | 0.4425 (9) | 0.5556 (15) | 0.6959 (13) | 0.0578 (16)* | |
H11 | −0.0165 (9) | 0.6858 (15) | 0.4279 (13) | 0.0677 (16)* | |
H81 | 0.1225 (9) | 0.8800 (15) | 0.3356 (13) | 0.0641 (16)* | |
H82 | 0.0810 (9) | 0.6662 (15) | 0.2215 (13) | 0.0571 (16)* | |
H101 | 0.4362 (9) | 0.2409 (15) | 0.4103 (13) | 0.0625 (16)* | |
H102 | 0.4088 (9) | 0.0325 (15) | 0.4775 (13) | 0.0647 (16)* | |
H103 | 0.4772 (8) | 0.2306 (15) | 0.5713 (13) | 0.0681 (16)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.0686 (9) | 0.0768 (10) | 0.1205 (11) | 0.0191 (9) | 0.0617 (9) | 0.0362 (10) |
O2 | 0.0600 (9) | 0.0844 (11) | 0.0921 (10) | 0.0192 (9) | 0.0434 (8) | 0.0401 (10) |
N1 | 0.0614 (10) | 0.0485 (10) | 0.0613 (10) | 0.0011 (10) | 0.0318 (9) | −0.0057 (10) |
C2 | 0.0554 (11) | 0.0601 (12) | 0.0579 (12) | −0.0123 (10) | 0.0238 (10) | 0.0022 (11) |
C3 | 0.0505 (10) | 0.0506 (12) | 0.0616 (11) | −0.0027 (10) | 0.0322 (10) | 0.0081 (11) |
C4 | 0.0755 (12) | 0.0517 (12) | 0.0749 (12) | −0.0022 (11) | 0.0482 (10) | −0.0052 (11) |
C5 | 0.0857 (12) | 0.0649 (12) | 0.0638 (12) | −0.0202 (12) | 0.0387 (11) | −0.0177 (11) |
C6 | 0.0615 (11) | 0.0744 (13) | 0.0584 (12) | −0.0098 (11) | 0.024 (1) | 0.0032 (12) |
C7 | 0.0549 (11) | 0.0514 (11) | 0.0506 (11) | 0.0007 (10) | 0.0265 (10) | 0.0080 (11) |
C8 | 0.0552 (11) | 0.0650 (13) | 0.0787 (12) | 0.0017 (11) | 0.036 (1) | 0.0179 (12) |
C9 | 0.0417 (10) | 0.0624 (12) | 0.0643 (12) | 0.0012 (11) | 0.0212 (10) | 0.0048 (12) |
C10 | 0.0644 (12) | 0.0791 (13) | 0.0767 (12) | 0.0117 (12) | 0.0286 (11) | 0.0047 (12) |
C31 | 0.0563 (10) | 0.0400 (11) | 0.0560 (11) | −0.0047 (10) | 0.0349 (9) | −0.0001 (10) |
C71 | 0.0556 (11) | 0.0392 (11) | 0.0507 (11) | −0.0031 (10) | 0.0308 (9) | 0.0023 (10) |
Geometric parameters (Å, º) top
O1—C9 | 1.308 (3) | C8—C9 | 1.507 (3) |
O2—C9 | 1.211 (3) | C31—C71 | 1.411 (3) |
N1—C2 | 1.373 (3) | O1—H11 | 0.851 (16) |
N1—C71 | 1.370 (3) | N1—H1 | 0.877 (13) |
C2—C3 | 1.349 (4) | C2—H2 | 0.983 (13) |
C3—C8 | 1.497 (3) | C4—H4 | 0.988 (13) |
C3—C31 | 1.428 (3) | C5—H5 | 1.032 (11) |
C4—C5 | 1.373 (4) | C6—H6 | 0.979 (16) |
C4—C31 | 1.395 (4) | C8—H81 | 1.019 (8) |
C5—C6 | 1.396 (3) | C8—H82 | 1.002 (13) |
C6—C7 | 1.377 (4) | C10—H101 | 0.975 (14) |
C7—C10 | 1.498 (4) | C10—H102 | 0.941 (10) |
C7—C71 | 1.390 (3) | C10—H103 | 1.010 (15) |
| | | |
C2—N1—C71 | 109.4 (2) | C2—N1—H1 | 127.6 (10) |
N1—C2—C3 | 109.8 (2) | C71—N1—H1 | 123 (1) |
C2—C3—C8 | 126.8 (2) | N1—C2—H2 | 120.3 (8) |
C2—C3—C31 | 106.8 (2) | C3—C2—H2 | 129.7 (8) |
C8—C3—C31 | 126.3 (2) | C5—C4—H4 | 121.1 (8) |
C5—C4—C31 | 119.1 (2) | C31—C4—H4 | 119.6 (8) |
C4—C5—C6 | 120.9 (3) | C4—C5—H5 | 119.2 (9) |
C5—C6—C7 | 122.5 (2) | C6—C5—H5 | 119.7 (10) |
C6—C7—C10 | 122.4 (2) | C5—C6—H6 | 120.2 (7) |
C6—C7—C71 | 115.7 (2) | C7—C6—H6 | 117.3 (7) |
C10—C7—C71 | 121.9 (2) | C3—C8—H81 | 112.4 (10) |
C3—C8—C9 | 115.0 (2) | C3—C8—H82 | 111.9 (9) |
O1—C9—O2 | 123.1 (2) | C9—C8—H81 | 106.8 (9) |
O1—C9—C8 | 112.4 (2) | C9—C8—H82 | 104.7 (10) |
O2—C9—C8 | 124.5 (2) | H81—C8—H82 | 105.3 (9) |
C3—C31—C4 | 134.5 (2) | C7—C10—H101 | 112.7 (8) |
C3—C31—C71 | 107.29 (19) | C7—C10—H102 | 110.2 (11) |
C4—C31—C71 | 118.18 (19) | C7—C10—H103 | 108.6 (7) |
N1—C71—C7 | 129.8 (2) | H101—C10—H102 | 98.7 (10) |
N1—C71—C31 | 106.58 (18) | H101—C10—H103 | 106.0 (13) |
C7—C71—C31 | 123.6 (2) | H102—C10—H103 | 120.2 (10) |
C9—O1—H11 | 106.8 (9) | | |
| | | |
C71—N1—C2—C3 | 0.1 (3) | C4—C5—C6—C7 | −0.4 (4) |
C2—N1—C71—C7 | −177.4 (2) | C5—C6—C7—C10 | 178.0 (3) |
C2—N1—C71—C31 | 0.4 (3) | C5—C6—C7—C71 | −0.7 (4) |
N1—C2—C3—C8 | 176.7 (2) | C6—C7—C71—N1 | 179.2 (2) |
N1—C2—C3—C31 | −0.5 (3) | C6—C7—C71—C31 | 1.8 (3) |
C2—C3—C8—C9 | 102.5 (3) | C10—C7—C71—N1 | 0.4 (4) |
C31—C3—C8—C9 | −80.8 (3) | C10—C7—C71—C31 | −177.0 (2) |
C2—C3—C31—C4 | 179.4 (3) | C3—C8—C9—O1 | 172.8 (2) |
C2—C3—C31—C71 | 0.7 (3) | C3—C8—C9—O2 | −9.2 (4) |
C8—C3—C31—C4 | 2.1 (4) | C3—C31—C71—N1 | −0.7 (3) |
C8—C3—C31—C71 | −176.5 (2) | C3—C31—C71—C7 | 177.3 (2) |
C31—C4—C5—C6 | 0.6 (4) | C4—C31—C71—N1 | −179.6 (2) |
C5—C4—C31—C3 | −178.2 (3) | C4—C31—C71—C7 | −1.6 (4) |
C5—C4—C31—C71 | 0.3 (4) | | |
(4-Et-IAA) 4-ethyl-indole-3-acetic acid
top
Crystal data top
C12H13NO2 | F(000) = 432 |
Mr = 203.24 | Dx = 1.360 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
a = 9.288 (1) Å | Cell parameters from 25 reflections |
b = 7.440 (1) Å | θ = 6–18° |
c = 14.776 (1) Å | µ = 0.09 mm−1 |
β = 103.530 (6)° | T = 297 K |
V = 992.72 (8) Å3 | Plate, colourless |
Z = 4 | 0.45 × 0.20 × 0.06 mm |
Data collection top
Enraf-Nonius CAD4 diffractometer | Rint = 0.018 |
Radiation source: fine-focus sealed tube | θmax = 25°, θmin = 2° |
Graphite monochromator | h = −1→11 |
ω/2θ scans | k = −1→8 |
2594 measured reflections | l = −17→17 |
1526 independent reflections | 3 standard reflections every 87 reflections |
999 reflections with I > 3σ(I) | intensity decay: 1.5% |
Refinement top
Refinement on F | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.042 | Hydrogen site location: difference Fourier map |
wR(F2) = 0.046 | All H-atom parameters refined |
999 reflections | Calculated w = 0.8494/[σ2(Fo) + 0.002474(Fo2)] |
188 parameters | (Δ/σ)max = 0.010 |
0 restraints | Δρmax = 0.02 e Å−3 |
0 constraints | Δρmin = −0.02 e Å−3 |
Special details top
Geometry. Bond distances, angles etc. have been calculated using the rounded
fractional coordinates. All e.s.d.'s are estimated from the variances of the
(full) variance-covariance matrix. The cell e.s.d.'s are taken into account in
the estimation of distances, angles and torsion angles |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 0.0901 (3) | 0.9177 (4) | −0.0898 (1) | 0.0447 (8) | |
O2 | 0.1554 (2) | 0.9165 (3) | 0.0643 (1) | 0.0427 (8) | |
N1 | 0.5646 (3) | 0.7035 (4) | 0.2082 (2) | 0.0370 (9) | |
C2 | 0.4349 (4) | 0.7608 (5) | 0.1510 (2) | 0.0338 (10) | |
C3 | 0.4470 (3) | 0.7643 (4) | 0.0610 (2) | 0.0272 (9) | |
C4 | 0.6774 (3) | 0.6834 (4) | −0.0070 (2) | 0.0298 (10) | |
C5 | 0.8228 (4) | 0.6282 (5) | 0.0230 (2) | 0.0384 (11) | |
C6 | 0.8888 (4) | 0.5939 (5) | 0.1171 (2) | 0.0440 (11) | |
C7 | 0.8109 (4) | 0.6144 (5) | 0.1843 (2) | 0.0411 (11) | |
C8 | 0.3287 (3) | 0.8145 (5) | −0.0238 (2) | 0.0297 (10) | |
C9 | 0.1852 (3) | 0.8867 (4) | −0.0098 (2) | 0.0283 (9) | |
C10 | 0.6073 (4) | 0.7177 (5) | −0.1083 (2) | 0.0327 (10) | |
C11 | 0.7026 (5) | 0.6843 (7) | −0.1775 (2) | 0.0465 (14) | |
C31 | 0.5956 (3) | 0.7070 (4) | 0.0616 (2) | 0.0277 (9) | |
C71 | 0.6651 (3) | 0.6708 (4) | 0.1556 (2) | 0.031 (1) | |
H1 | 0.576 (4) | 0.678 (5) | 0.270 (3) | 0.052 (11)* | |
H2 | 0.355 (4) | 0.786 (4) | 0.1734 (19) | 0.027 (8)* | |
H5 | 0.881 (4) | 0.610 (5) | −0.020 (2) | 0.043 (10)* | |
H6 | 0.998 (4) | 0.561 (5) | 0.133 (2) | 0.052 (10)* | |
H7 | 0.858 (4) | 0.595 (5) | 0.247 (2) | 0.049 (10)* | |
H11 | 0.002 (5) | 0.972 (6) | −0.078 (3) | 0.079 (14)* | |
H81 | 0.362 (3) | 0.916 (4) | −0.059 (2) | 0.034 (8)* | |
H82 | 0.307 (4) | 0.708 (5) | −0.072 (3) | 0.059 (11)* | |
H101 | 0.521 (4) | 0.642 (4) | −0.127 (2) | 0.034 (9)* | |
H102 | 0.570 (4) | 0.848 (5) | −0.114 (2) | 0.041 (9)* | |
H111 | 0.639 (4) | 0.713 (5) | −0.245 (3) | 0.059 (11)* | |
H112 | 0.737 (5) | 0.564 (7) | −0.172 (3) | 0.072 (14)* | |
H113 | 0.801 (5) | 0.765 (6) | −0.163 (3) | 0.072 (13)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.0331 (13) | 0.0699 (18) | 0.0287 (11) | 0.0197 (13) | 0.0025 (10) | −0.0057 (11) |
O2 | 0.0321 (12) | 0.0669 (17) | 0.0307 (12) | 0.0139 (13) | 0.0104 (10) | −0.0028 (11) |
N1 | 0.0419 (17) | 0.0455 (18) | 0.0225 (13) | 0.0048 (14) | 0.0056 (12) | 0.0015 (12) |
C2 | 0.0314 (17) | 0.0426 (19) | 0.0301 (15) | 0.0038 (16) | 0.0124 (13) | 0.0000 (14) |
C3 | 0.0296 (15) | 0.0255 (16) | 0.0275 (14) | −0.0007 (14) | 0.0084 (12) | −0.0014 (13) |
C4 | 0.0299 (17) | 0.0265 (17) | 0.0338 (16) | −0.0020 (14) | 0.0092 (13) | −0.0016 (12) |
C5 | 0.0312 (19) | 0.042 (2) | 0.0433 (18) | 0.0042 (16) | 0.0113 (15) | −0.0041 (16) |
C6 | 0.0272 (18) | 0.054 (2) | 0.0469 (19) | 0.0065 (19) | 0.0009 (15) | −0.0053 (17) |
C7 | 0.0367 (19) | 0.045 (2) | 0.0353 (18) | 0.0036 (18) | −0.0043 (16) | −0.0010 (16) |
C8 | 0.0292 (17) | 0.0357 (19) | 0.0251 (14) | 0.0024 (15) | 0.0083 (13) | 0.0002 (14) |
C9 | 0.0274 (17) | 0.0294 (16) | 0.0283 (15) | −0.0004 (14) | 0.0072 (13) | −0.0021 (13) |
C10 | 0.0290 (17) | 0.037 (2) | 0.0334 (16) | 0.0010 (17) | 0.0099 (13) | 0.0006 (14) |
C11 | 0.043 (2) | 0.065 (3) | 0.0365 (19) | 0.002 (2) | 0.0192 (17) | −0.0015 (17) |
C31 | 0.0273 (15) | 0.0255 (17) | 0.0299 (15) | 0.0010 (14) | 0.0057 (12) | −0.0013 (12) |
C71 | 0.0319 (17) | 0.0332 (18) | 0.0271 (15) | −0.0010 (15) | 0.0053 (13) | −0.0036 (13) |
Geometric parameters (Å, º) top
O1—C9 | 1.320 (3) | C31—C71 | 1.414 (4) |
O2—C9 | 1.211 (3) | O1—H11 | 0.96 (5) |
N1—C2 | 1.368 (5) | N1—H1 | 0.91 (4) |
N1—C71 | 1.369 (4) | C2—H2 | 0.90 (4) |
C2—C3 | 1.361 (4) | C5—H5 | 0.94 (3) |
C3—C8 | 1.508 (4) | C6—H6 | 1.02 (4) |
C3—C31 | 1.443 (4) | C7—H7 | 0.94 (3) |
C4—C5 | 1.382 (5) | C8—H81 | 1.01 (3) |
C4—C10 | 1.508 (4) | C8—H82 | 1.05 (4) |
C4—C31 | 1.413 (4) | C10—H101 | 0.97 (3) |
C5—C6 | 1.405 (4) | C10—H102 | 1.03 (4) |
C6—C7 | 1.367 (5) | C11—H111 | 1.06 (4) |
C7—C71 | 1.386 (5) | C11—H112 | 0.95 (5) |
C8—C9 | 1.496 (4) | C11—H113 | 1.07 (5) |
C10—C11 | 1.521 (5) | | |
| | | |
C2—N1—C71 | 108.9 (3) | N1—C2—H2 | 121.4 (18) |
N1—C2—C3 | 110.3 (3) | C3—C2—H2 | 128.2 (19) |
C2—C3—C8 | 127.3 (3) | C4—C5—H5 | 120 (2) |
C2—C3—C31 | 106.6 (3) | C6—C5—H5 | 117 (2) |
C8—C3—C31 | 126.1 (3) | C5—C6—H6 | 117.0 (17) |
C5—C4—C10 | 122.1 (3) | C7—C6—H6 | 121.9 (17) |
C5—C4—C31 | 117.1 (3) | C6—C7—H7 | 120 (2) |
C10—C4—C31 | 120.8 (3) | C71—C7—H7 | 123 (2) |
C4—C5—C6 | 122.6 (3) | C3—C8—H81 | 111.3 (17) |
C5—C6—C7 | 121.1 (3) | C3—C8—H82 | 111 (2) |
C6—C7—C71 | 117.2 (3) | C9—C8—H81 | 101.2 (17) |
C3—C8—C9 | 118.3 (2) | C9—C8—H82 | 109 (2) |
O1—C9—O2 | 122.1 (3) | H81—C8—H82 | 104 (3) |
O1—C9—C8 | 111.7 (2) | C4—C10—H101 | 108.8 (17) |
O2—C9—C8 | 126.2 (3) | C4—C10—H102 | 107.5 (16) |
C4—C10—C11 | 117.1 (3) | C11—C10—H101 | 106.7 (19) |
C3—C31—C4 | 135.0 (3) | C11—C10—H102 | 109.7 (19) |
C3—C31—C71 | 106.2 (2) | H101—C10—H102 | 107 (3) |
C4—C31—C71 | 118.9 (3) | C10—C11—H111 | 108 (2) |
N1—C71—C7 | 128.8 (3) | C10—C11—H112 | 110 (3) |
N1—C71—C31 | 108.0 (3) | C10—C11—H113 | 112 (2) |
C7—C71—C31 | 123.2 (3) | H111—C11—H112 | 112 (3) |
C9—O1—H11 | 109 (3) | H111—C11—H113 | 110 (3) |
C2—N1—H1 | 124 (2) | H112—C11—H113 | 105 (4) |
C71—N1—H1 | 127 (2) | | |
| | | |
C71—N1—C2—C3 | 0.8 (4) | C5—C4—C31—C3 | 178.6 (3) |
C2—N1—C71—C7 | 178.6 (3) | C5—C4—C31—C71 | −0.9 (4) |
C2—N1—C71—C31 | −0.6 (4) | C10—C4—C31—C3 | −1.4 (5) |
N1—C2—C3—C8 | 178.3 (3) | C10—C4—C31—C71 | 179.1 (3) |
N1—C2—C3—C31 | −0.7 (4) | C4—C5—C6—C7 | −0.2 (6) |
C2—C3—C8—C9 | 6.7 (5) | C5—C6—C7—C71 | −0.2 (5) |
C31—C3—C8—C9 | −174.6 (3) | C6—C7—C71—N1 | −179.1 (3) |
C2—C3—C31—C4 | −179.3 (4) | C6—C7—C71—C31 | 0.0 (17) |
C2—C3—C31—C71 | 0.3 (4) | C3—C8—C9—O1 | −177.3 (3) |
C8—C3—C31—C4 | 1.7 (6) | C3—C8—C9—O2 | 3.2 (5) |
C8—C3—C31—C71 | −178.7 (3) | C3—C31—C71—N1 | 0.2 (4) |
C10—C4—C5—C6 | −179.3 (3) | C3—C31—C71—C7 | −179.1 (3) |
C31—C4—C5—C6 | 0.8 (5) | C4—C31—C71—N1 | 179.9 (3) |
C5—C4—C10—C11 | 1.5 (5) | C4—C31—C71—C7 | 0.6 (5) |
C31—C4—C10—C11 | −178.5 (3) | | |
(6-Et-IAA) 6-ethyl-indole-3-acetic acid
top
Crystal data top
C12H13NO2 | F(000) = 432 |
Mr = 203.24 | Dx = 1.307 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
a = 22.455 (1) Å | Cell parameters from 25 reflections |
b = 5.286 (1) Å | θ = 5–13° |
c = 9.313 (1) Å | µ = 0.09 mm−1 |
β = 110.89 (1)° | T = 103 K |
V = 1032.76 (10) Å3 | Plate, colourless |
Z = 4 | 0.30 × 0.20 × 0.06 mm |
Data collection top
Enraf-Nonius CAD4 diffractometer | Rint = 0.052 |
Radiation source: fine-focus sealed tube | θmax = 25°, θmin = 2° |
Graphite monochromator | h = 0→50 |
ω/2θ scans | k = 0→9 |
2917 measured reflections | l = −7→7 |
1476 independent reflections | 3 standard reflections every 87 reflections |
814 reflections with I > 2σ(I) | intensity decay: 2.4% |
Refinement top
Refinement on F | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.066 | Hydrogen site location: difference Fourier map |
wR(F2) = 0.052 | All H-atom pleaced in stereochemically expected positions
and treated as riding |
S = 0.91 | Calculated w = 3.3591/[σ2(Fo) + 0.000091(Fo2)] |
814 reflections | (Δ/σ)max = 0.05 |
153 parameters | Δρmax = 0.23 e Å−3 |
0 restraints | Δρmin = −0.28 e Å−3 |
0 constraints | |
Special details top
Geometry. Bond distances, angles etc. have been calculated using the rounded
fractional coordinates. All e.s.d.'s are estimated from the variances of the
(full) variance-covariance matrix. The cell e.s.d.'s are taken into account in
the estimation of distances, angles and torsion angles |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 0.4866 (2) | 0.2564 (7) | 0.6155 (4) | 0.0544 (18) | |
O2 | 0.43424 (18) | −0.1004 (7) | 0.5175 (4) | 0.0542 (14) | |
N1 | 0.2633 (3) | −0.2782 (8) | 0.6324 (6) | 0.059 (2) | |
C2 | 0.3246 (4) | −0.1955 (10) | 0.7080 (7) | 0.059 (3) | |
C3 | 0.3359 (4) | 0.0156 (10) | 0.6321 (7) | 0.055 (3) | |
C4 | 0.2588 (4) | 0.2437 (11) | 0.3877 (7) | 0.052 (3) | |
C5 | 0.1982 (4) | 0.2344 (11) | 0.2821 (7) | 0.058 (3) | |
C6 | 0.1543 (4) | 0.0466 (10) | 0.2855 (8) | 0.055 (3) | |
C7 | 0.1724 (4) | −0.1369 (10) | 0.3998 (7) | 0.053 (3) | |
C8 | 0.3964 (3) | 0.1657 (10) | 0.6779 (7) | 0.058 (3) | |
C9 | 0.4407 (3) | 0.0919 (11) | 0.5944 (6) | 0.053 (3) | |
C10 | 0.0879 (4) | 0.0487 (10) | 0.1664 (8) | 0.070 (3) | |
C11 | 0.0465 (4) | 0.2574 (11) | 0.1914 (9) | 0.087 (4) | |
C31 | 0.2787 (4) | 0.0611 (9) | 0.5051 (7) | 0.049 (3) | |
C71 | 0.2337 (4) | −0.1267 (10) | 0.5067 (8) | 0.056 (3) | |
H1 | 0.2430 (3) | −0.4279 (8) | 0.6641 (6) | 0.1500* | |
H2 | 0.3585 (4) | −0.2804 (10) | 0.8100 (7) | 0.051 (16)* | |
H4 | 0.2912 (4) | 0.3903 (11) | 0.3811 (7) | 0.061 (16)* | |
H5 | 0.1835 (4) | 0.3763 (11) | 0.1928 (7) | 0.042 (13)* | |
H7 | 0.1397 (4) | −0.2833 (10) | 0.4048 (7) | 0.058 (16)* | |
H11 | 0.521 (3) | 0.210 (13) | 0.570 (8) | 0.1500* | |
H81 | 0.4216 (3) | 0.1399 (10) | 0.7997 (7) | 0.060 (16)* | |
H82 | 0.3841 (3) | 0.3627 (10) | 0.6545 (7) | 0.074 (16)* | |
H101 | 0.0655 (4) | −0.1308 (10) | 0.1703 (8) | 0.052 (15)* | |
H102 | 0.0913 (4) | 0.0737 (10) | 0.0545 (8) | 0.12 (2)* | |
H111 | −0.0016 (4) | 0.2558 (11) | 0.1087 (9) | 0.08 (2)* | |
H112 | 0.0456 (4) | 0.2237 (11) | 0.3049 (9) | 0.15 (3)* | |
H113 | 0.0680 (4) | 0.4392 (11) | 0.1888 (9) | 0.11 (2)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.098 (4) | 0.027 (2) | 0.058 (3) | 0.009 (3) | 0.052 (3) | −0.002 (2) |
O2 | 0.102 (3) | 0.031 (2) | 0.050 (2) | 0.011 (2) | 0.052 (2) | −0.009 (2) |
N1 | 0.124 (5) | 0.024 (3) | 0.055 (4) | 0.007 (3) | 0.064 (4) | 0.008 (3) |
C2 | 0.122 (6) | 0.026 (3) | 0.050 (5) | 0.026 (4) | 0.057 (5) | 0.008 (3) |
C3 | 0.116 (6) | 0.023 (3) | 0.055 (5) | 0.015 (4) | 0.066 (5) | 0.001 (3) |
C4 | 0.113 (6) | 0.019 (3) | 0.055 (4) | −0.004 (4) | 0.067 (4) | −0.007 (4) |
C5 | 0.130 (6) | 0.019 (3) | 0.052 (4) | −0.001 (5) | 0.067 (5) | 0.003 (4) |
C6 | 0.120 (6) | 0.020 (3) | 0.049 (4) | 0.000 (4) | 0.058 (5) | −0.005 (3) |
C7 | 0.120 (6) | 0.015 (3) | 0.053 (4) | −0.003 (4) | 0.066 (5) | −0.001 (3) |
C8 | 0.116 (6) | 0.028 (3) | 0.058 (4) | 0.008 (4) | 0.064 (4) | −0.001 (3) |
C9 | 0.107 (6) | 0.032 (3) | 0.037 (4) | 0.022 (4) | 0.045 (4) | 0.014 (3) |
C10 | 0.138 (7) | 0.025 (4) | 0.064 (5) | −0.020 (4) | 0.056 (6) | −0.011 (4) |
C11 | 0.110 (8) | 0.033 (4) | 0.097 (7) | −0.012 (5) | 0.011 (6) | −0.017 (4) |
C31 | 0.109 (6) | 0.015 (3) | 0.055 (4) | 0.009 (4) | 0.067 (4) | 0.001 (3) |
C71 | 0.127 (7) | 0.016 (3) | 0.055 (5) | 0.007 (5) | 0.068 (5) | 0.002 (4) |
Geometric parameters (Å, º) top
O1—C9 | 1.309 (8) | C8—C9 | 1.516 (9) |
O2—C9 | 1.222 (7) | C10—C11 | 1.513 (11) |
O1—H11 | 1.03 (7) | C31—C71 | 1.420 (11) |
N1—C71 | 1.378 (8) | C2—H2 | 1.081 (9) |
N1—C2 | 1.375 (11) | C4—H4 | 1.080 (11) |
N1—H1 | 1.008 (8) | C5—H5 | 1.080 (8) |
C2—C3 | 1.392 (9) | C7—H7 | 1.079 (11) |
C3—C8 | 1.498 (10) | C8—H81 | 1.081 (9) |
C3—C31 | 1.422 (10) | C8—H82 | 1.079 (8) |
C4—C31 | 1.407 (8) | C10—H101 | 1.081 (9) |
C4—C5 | 1.366 (11) | C10—H102 | 1.08 (1) |
C5—C6 | 1.407 (11) | C11—H111 | 1.080 (12) |
C6—C10 | 1.508 (12) | C11—H112 | 1.079 (11) |
C6—C7 | 1.389 (8) | C11—H113 | 1.08 (1) |
C7—C71 | 1.383 (12) | | |
| | | |
O1···C8i | 3.418 (7) | H1···C5vi | 2.304 (9) |
O1···C9i | 3.157 (7) | H1···C6vi | 2.637 (11) |
O1···O2ii | 2.635 (6) | H1···C31vi | 3.032 (8) |
O2···O1ii | 2.635 (6) | H2···H82v | 2.565 (9) |
O2···C2iii | 3.236 (8) | H2···H11ix | 2.53 (7) |
O2···C9ii | 3.326 (8) | H2···O2vi | 2.163 (8) |
O1···H81iv | 2.832 (7) | H4···C2iv | 2.574 (10) |
O1···H81i | 2.797 (7) | H4···C3iv | 2.880 (11) |
O2···H11ii | 1.61 (7) | H5···H102 | 2.569 (11) |
O2···H2iii | 2.163 (8) | H5···C7iv | 2.987 (9) |
N1···C4v | 3.380 (8) | H5···C71iv | 2.724 (11) |
N1···C4vi | 3.448 (8) | H7···H101 | 2.367 (10) |
N1···C5vi | 3.369 (9) | H7···H113v | 2.546 (10) |
C2···O2vi | 3.236 (8) | H7···H102vi | 2.562 (10) |
C2···C4vii | 3.529 (10) | H11···H2i | 2.53 (7) |
C4···N1iii | 3.448 (8) | H11···O2ii | 1.61 (7) |
C4···N1viii | 3.380 (8) | H11···C9ii | 2.56 (7) |
C4···C2iv | 3.529 (10) | H11···H11ii | 2.58 (10) |
C5···N1iii | 3.369 (9) | H81···O1ix | 2.797 (7) |
C8···O1ix | 3.418 (7) | H81···O1vii | 2.832 (7) |
C9···O2ii | 3.326 (8) | H81···C9vii | 2.981 (8) |
C9···O1ix | 3.157 (7) | H82···C2viii | 2.822 (9) |
C2···H82v | 2.822 (9) | H82···C4 | 3.082 (10) |
C2···H4vii | 2.574 (10) | H82···H2viii | 2.565 (9) |
C3···H4vii | 2.880 (11) | H101···H7 | 2.367 (10) |
C4···H82 | 3.082 (10) | H101···H113v | 2.279 (8) |
C4···H1iii | 2.537 (8) | H101···H111x | 2.567 (10) |
C5···H113 | 2.943 (12) | H102···H5 | 2.569 (11) |
C5···H1iii | 2.304 (9) | H102···H7iii | 2.562 (10) |
C6···H1iii | 2.637 (11) | H102···H112iv | 2.429 (10) |
C7···H5vii | 2.987 (9) | H111···C10x | 3.061 (10) |
C9···H11ii | 2.56 (7) | H111···H101x | 2.567 (10) |
C9···H81iv | 2.981 (8) | H112···H102vii | 2.429 (10) |
C10···H111x | 3.061 (10) | H113···C5 | 2.943 (12) |
C31···H1iii | 3.032 (8) | H113···H7viii | 2.546 (10) |
C71···H5vii | 2.724 (11) | H113···H101viii | 2.279 (8) |
H1···C4vi | 2.537 (8) | | |
| | | |
C9—O1—H11 | 116 (4) | N1—C2—H2 | 125.5 (7) |
C2—N1—C71 | 110.0 (6) | C3—C2—H2 | 125.5 (9) |
C71—N1—H1 | 125.0 (7) | C5—C4—H4 | 120.2 (7) |
C2—N1—H1 | 125.0 (6) | C31—C4—H4 | 120.2 (8) |
N1—C2—C3 | 109.0 (6) | C4—C5—H5 | 118.8 (8) |
C2—C3—C31 | 106.5 (7) | C6—C5—H5 | 118.9 (8) |
C2—C3—C8 | 126.2 (6) | C6—C7—H7 | 121.1 (8) |
C8—C3—C31 | 127.3 (5) | C71—C7—H7 | 121.0 (7) |
C5—C4—C31 | 119.6 (7) | C3—C8—H81 | 108.3 (6) |
C4—C5—C6 | 122.3 (6) | C3—C8—H82 | 108.2 (7) |
C7—C6—C10 | 120.7 (7) | C9—C8—H81 | 108.2 (7) |
C5—C6—C7 | 119.6 (7) | C9—C8—H82 | 108.2 (6) |
C5—C6—C10 | 119.7 (6) | H81—C8—H82 | 109.5 (7) |
C6—C7—C71 | 117.9 (7) | C6—C10—H101 | 108.6 (7) |
C3—C8—C9 | 114.3 (5) | C6—C10—H102 | 108.6 (9) |
O1—C9—O2 | 124.3 (6) | C11—C10—H101 | 108.4 (9) |
O1—C9—C8 | 112.2 (5) | C11—C10—H102 | 108.5 (7) |
O2—C9—C8 | 123.5 (6) | H101—C10—H102 | 109.5 (7) |
C6—C10—C11 | 113.1 (6) | C10—C11—H111 | 113.4 (7) |
C4—C31—C71 | 117.2 (7) | C10—C11—H112 | 104.9 (7) |
C3—C31—C4 | 134.8 (7) | C10—C11—H113 | 110.0 (9) |
C3—C31—C71 | 107.9 (5) | H111—C11—H112 | 109.5 (10) |
N1—C71—C7 | 130.1 (7) | H111—C11—H113 | 109.4 (8) |
N1—C71—C31 | 106.6 (7) | H112—C11—H113 | 109.5 (8) |
C7—C71—C31 | 123.3 (6) | | |
| | | |
C2—N1—C71—C31 | −0.6 (8) | C4—C5—C6—C7 | 0.2 (12) |
C71—N1—C2—C3 | 0.4 (8) | C4—C5—C6—C10 | 179.4 (7) |
C2—N1—C71—C7 | −179.1 (7) | C7—C6—C10—C11 | 106.0 (7) |
N1—C2—C3—C31 | −0.1 (8) | C5—C6—C10—C11 | −73.2 (9) |
N1—C2—C3—C8 | 179.2 (6) | C10—C6—C7—C71 | −179.2 (7) |
C8—C3—C31—C71 | −179.5 (7) | C5—C6—C7—C71 | 0.0 (11) |
C2—C3—C8—C9 | 96.4 (8) | C6—C7—C71—N1 | 178.2 (7) |
C8—C3—C31—C4 | −0.5 (13) | C6—C7—C71—C31 | 0.0 (11) |
C31—C3—C8—C9 | −84.5 (8) | C3—C8—C9—O1 | 167.9 (5) |
C2—C3—C31—C4 | 178.7 (8) | C3—C8—C9—O2 | −12.7 (8) |
C2—C3—C31—C71 | −0.3 (8) | C4—C31—C71—N1 | −178.7 (6) |
C31—C4—C5—C6 | −0.3 (11) | C4—C31—C71—C7 | 0.0 (11) |
C5—C4—C31—C71 | 0.2 (11) | C3—C31—C71—C7 | 179.2 (7) |
C5—C4—C31—C3 | −178.8 (8) | C3—C31—C71—N1 | 0.6 (8) |
Symmetry codes: (i) −x+1, y+1/2, −z+3/2; (ii) −x+1, −y, −z+1; (iii) x, −y−1/2, z−1/2; (iv) x, −y+1/2, z−1/2; (v) x, y−1, z; (vi) x, −y−1/2, z+1/2; (vii) x, −y+1/2, z+1/2; (viii) x, y+1, z; (ix) −x+1, y−1/2, −z+3/2; (x) −x, −y, −z. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H11···O2ii | 1.03 (7) | 1.61 (7) | 2.635 (6) | 170 (6) |
C2—H2···O2vi | 1.08 (1) | 2.16 (1) | 3.236 (8) | 172 (1) |
Symmetry codes: (ii) −x+1, −y, −z+1; (vi) x, −y−1/2, z+1/2. |
(iaalt) indole-3-acetic acid
top
Crystal data top
C10H9NO2 | F(000) = 368 |
Mr = 175.19 | Dx = 1.383 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 25 reflections |
a = 17.8100 (5) Å | θ = 6–17° |
b = 5.1750 (4) Å | µ = 0.10 mm−1 |
c = 9.5340 (4) Å | T = 103 K |
β = 106.700 (6)° | Prismatic, colourless |
V = 841.66 (8) Å3 | 0.60 × 0.45 × 0.15 mm |
Z = 4 | |
Data collection top
Enraf-Nonius CAD4 diffractometer | Rint = 0.014 |
Radiation source: fine-focus sealed tube | θmax = 25°, θmin = 2° |
Graphite monochromator | h = −20→20 |
ω/2θ scans | k = 0→6 |
1236 measured reflections | l = 0→11 |
1214 independent reflections | 3 standard reflections every 87 reflections |
1180 reflections with I > 3σ(I) | intensity decay: 0.1% |
Refinement top
Refinement on F | 0 restraints |
Least-squares matrix: full | 0 constraints |
R[F2 > 2σ(F2)] = 0.038 | H-atom refinement: see text |
wR(F2) = 0.040 | Calculated w = 5.4218/[σ2(Fo) + 0.00000(Fo2)] |
S = 0.86 | (Δ/σ)max = 0.005 |
1180 reflections | Δρmax = 0.20 e Å−3 |
157 parameters | Δρmin = −0.22 e Å−3 |
Special details top
Geometry. Bond distances, angles etc. have been calculated using the rounded
fractional coordinates. All e.s.d.'s are estimated from the variances of the
(full) variance-covariance matrix. The cell e.s.d.'s are taken into account in
the estimation of distances, angles and torsion angles |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 0.0157 (1) | 0.7342 (3) | 0.3859 (2) | 0.0310 (5) | |
O2 | 0.0800 (1) | 1.0996 (3) | 0.4669 (2) | 0.0286 (5) | |
N1 | 0.2875 (1) | 1.2749 (3) | 0.3120 (2) | 0.0281 (6) | |
C2 | 0.2129 (1) | 1.1844 (4) | 0.2547 (2) | 0.0278 (7) | |
C3 | 0.2001 (1) | 0.9785 (4) | 0.3347 (2) | 0.0239 (7) | |
C4 | 0.2964 (1) | 0.7584 (4) | 0.5629 (2) | 0.0239 (6) | |
C5 | 0.3721 (1) | 0.7719 (4) | 0.6543 (2) | 0.0272 (7) | |
C6 | 0.4241 (1) | 0.9633 (4) | 0.6350 (2) | 0.0292 (8) | |
C7 | 0.4017 (1) | 1.1432 (4) | 0.5242 (2) | 0.0273 (7) | |
C8 | 0.1268 (1) | 0.8226 (4) | 0.3066 (3) | 0.0280 (7) | |
C9 | 0.0727 (1) | 0.9004 (4) | 0.3950 (2) | 0.0239 (7) | |
C31 | 0.2716 (1) | 0.9394 (4) | 0.4493 (2) | 0.0202 (6) | |
C71 | 0.3256 (1) | 1.1285 (4) | 0.4324 (2) | 0.0219 (6) | |
H1 | 0.3120 (13) | 1.412 (5) | 0.271 (3) | 0.047 (7)* | |
H2 | 0.1781 (10) | 1.253 (4) | 0.163 (2) | 0.024 (5)* | |
H4 | 0.2591 (11) | 0.623 (4) | 0.579 (2) | 0.030 (6)* | |
H5 | 0.3890 (11) | 0.650 (4) | 0.734 (2) | 0.037 (6)* | |
H6 | 0.4774 (10) | 0.966 (4) | 0.7023 (19) | 0.021 (5)* | |
H7 | 0.4395 (12) | 1.274 (5) | 0.508 (2) | 0.045 (7)* | |
H11 | −0.0170 (13) | 0.795 (5) | 0.437 (3) | 0.062 (9)* | |
H81 | 0.0933 (11) | 0.833 (4) | 0.199 (2) | 0.035 (6)* | |
H82 | 0.1394 (12) | 0.651 (5) | 0.330 (2) | 0.041 (7)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.0295 (8) | 0.0248 (8) | 0.0435 (10) | −0.0040 (8) | 0.0183 (7) | −0.0115 (8) |
O2 | 0.0302 (8) | 0.0245 (8) | 0.0338 (9) | −0.0025 (7) | 0.0137 (7) | −0.0122 (8) |
N1 | 0.0379 (11) | 0.0172 (10) | 0.0336 (11) | 0.0031 (9) | 0.0172 (9) | 0.0049 (9) |
C2 | 0.0357 (13) | 0.0225 (12) | 0.0264 (12) | 0.0105 (10) | 0.0110 (11) | −0.0004 (11) |
C3 | 0.0284 (11) | 0.0201 (11) | 0.0266 (12) | 0.0042 (10) | 0.0133 (10) | −0.0056 (10) |
C4 | 0.0315 (11) | 0.0136 (10) | 0.0326 (12) | 0.0003 (10) | 0.0186 (10) | −0.0011 (10) |
C5 | 0.0341 (12) | 0.0181 (11) | 0.0318 (13) | 0.0080 (11) | 0.0133 (11) | 0.0041 (11) |
C6 | 0.0263 (12) | 0.0245 (13) | 0.0355 (14) | 0.004 (1) | 0.0068 (11) | −0.0040 (11) |
C7 | 0.0293 (12) | 0.0169 (11) | 0.0404 (14) | −0.0011 (10) | 0.0176 (11) | −0.0032 (11) |
C8 | 0.0265 (12) | 0.0253 (13) | 0.0335 (13) | 0.0026 (10) | 0.0106 (11) | −0.0078 (12) |
C9 | 0.0230 (11) | 0.0231 (12) | 0.0232 (11) | 0.0036 (10) | 0.0027 (9) | 0.0005 (11) |
C31 | 0.0272 (11) | 0.0113 (10) | 0.0264 (12) | 0.0040 (8) | 0.0146 (10) | −0.0031 (9) |
C71 | 0.0297 (11) | 0.0116 (10) | 0.0289 (12) | 0.0017 (9) | 0.0154 (10) | −0.0006 (10) |
Geometric parameters (Å, º) top
O1—C9 | 1.314 (3) | C6—C7 | 1.378 (3) |
O2—C9 | 1.224 (3) | C7—C71 | 1.388 (3) |
O1—H11 | 0.92 (3) | C8—C9 | 1.506 (3) |
N1—C2 | 1.366 (3) | C31—C71 | 1.413 (3) |
N1—C71 | 1.380 (3) | C2—H2 | 0.981 (19) |
N1—H1 | 0.97 (3) | C4—H4 | 1.01 (2) |
C2—C3 | 1.367 (3) | C5—H5 | 0.967 (19) |
C3—C31 | 1.434 (3) | C6—H6 | 0.981 (18) |
C3—C8 | 1.492 (3) | C7—H7 | 1.00 (2) |
C4—C31 | 1.404 (3) | C8—H81 | 1.029 (19) |
C4—C5 | 1.381 (3) | C8—H82 | 0.93 (3) |
C5—C6 | 1.404 (3) | | |
| | | |
O1···C8i | 3.416 (3) | C4···H82 | 3.08 (2) |
O1···C9i | 3.196 (3) | C4···H1iii | 2.57 (3) |
O1···O2ii | 2.644 (3) | C5···H6x | 3.075 (19) |
O2···C9ii | 3.345 (3) | C5···H1iii | 2.40 (3) |
O2···O1ii | 2.644 (3) | C6···H1iii | 2.75 (3) |
O2···C2iii | 3.263 (3) | C9···H81viii | 3.063 (19) |
O1···H81i | 2.80 (2) | C9···H11ii | 2.64 (3) |
O2···H11ii | 1.73 (3) | C31···H1iii | 3.04 (3) |
O2···H2iii | 2.292 (19) | C71···H5vi | 2.86 (2) |
N1···C4iv | 3.434 (3) | H1···C4v | 2.57 (3) |
N1···C4v | 3.423 (3) | H1···C5v | 2.40 (3) |
N1···C5v | 3.366 (3) | H1···C6v | 2.75 (3) |
C2···O2v | 3.263 (3) | H1···C31v | 3.04 (3) |
C2···C4vi | 3.517 (3) | H2···O2v | 2.292 (19) |
C4···C71vii | 3.580 (3) | H4···C2viii | 2.61 (2) |
C4···C2viii | 3.517 (3) | H4···C3viii | 2.966 (19) |
C4···N1vii | 3.434 (3) | H5···H6x | 2.47 (3) |
C4···N1iii | 3.423 (3) | H5···C71viii | 2.86 (2) |
C5···C7vii | 3.575 (3) | H6···C5xi | 3.075 (19) |
C5···N1iii | 3.366 (3) | H6···H5xi | 2.47 (3) |
C7···C5iv | 3.575 (3) | H11···O2ii | 1.73 (3) |
C8···O1ix | 3.416 (3) | H11···C9ii | 2.64 (3) |
C9···O2ii | 3.345 (3) | H11···H11ii | 2.43 (4) |
C9···O1ix | 3.196 (3) | H81···O1ix | 2.80 (2) |
C71···C4iv | 3.580 (3) | H81···C9vi | 3.063 (19) |
C2···H82iv | 2.93 (2) | H82···C2vii | 2.93 (2) |
C2···H4vi | 2.61 (2) | H82···C4 | 3.08 (2) |
C3···H4vi | 2.966 (19) | | |
| | | |
C9—O1—H11 | 109.7 (16) | N1—C71—C7 | 130.69 (19) |
C2—N1—C71 | 109.49 (16) | N1—C71—C31 | 106.67 (16) |
C2—N1—H1 | 125.9 (16) | C7—C71—C31 | 122.62 (18) |
C71—N1—H1 | 124.4 (15) | N1—C2—H2 | 121.7 (12) |
N1—C2—C3 | 110.06 (17) | C3—C2—H2 | 128.0 (12) |
C2—C3—C8 | 126.79 (18) | C5—C4—H4 | 120.4 (11) |
C2—C3—C31 | 106.33 (17) | C31—C4—H4 | 120.4 (11) |
C8—C3—C31 | 126.88 (19) | C4—C5—H5 | 119.3 (12) |
C5—C4—C31 | 119.13 (18) | C6—C5—H5 | 119.7 (12) |
C4—C5—C6 | 120.95 (18) | C5—C6—H6 | 118.4 (12) |
C5—C6—C7 | 121.37 (17) | C7—C6—H6 | 120.3 (12) |
C6—C7—C71 | 117.47 (18) | C6—C7—H7 | 121.2 (12) |
C3—C8—C9 | 114.99 (19) | C71—C7—H7 | 121.3 (12) |
O1—C9—O2 | 122.95 (19) | C3—C8—H81 | 112.2 (12) |
O1—C9—C8 | 113.23 (18) | C3—C8—H82 | 109.6 (14) |
O2—C9—C8 | 123.82 (19) | C9—C8—H81 | 105.2 (11) |
C4—C31—C71 | 118.45 (17) | C9—C8—H82 | 105.7 (13) |
C3—C31—C4 | 134.07 (18) | H81—C8—H82 | 108.7 (17) |
C3—C31—C71 | 107.44 (17) | | |
| | | |
C71—N1—C2—C3 | −0.1 (2) | C5—C4—C31—C71 | 0.4 (3) |
C2—N1—C71—C31 | 0.0 (2) | C31—C4—C5—C6 | 0.0 (3) |
C2—N1—C71—C7 | 178.7 (2) | C4—C5—C6—C7 | −0.3 (3) |
N1—C2—C3—C31 | 0.1 (2) | C5—C6—C7—C71 | 0.1 (3) |
N1—C2—C3—C8 | −178.89 (19) | C6—C7—C71—C31 | 0.3 (3) |
C31—C3—C8—C9 | 84.4 (3) | C6—C7—C71—N1 | −178.3 (2) |
C2—C3—C8—C9 | −96.9 (3) | C3—C8—C9—O2 | 11.5 (3) |
C2—C3—C31—C71 | −0.1 (2) | C3—C8—C9—O1 | −169.35 (18) |
C8—C3—C31—C4 | 1.0 (4) | C4—C31—C71—C7 | −0.5 (3) |
C2—C3—C31—C4 | −178.0 (2) | C3—C31—C71—N1 | 0.0 (2) |
C8—C3—C31—C71 | 178.91 (19) | C4—C31—C71—N1 | 178.33 (17) |
C5—C4—C31—C3 | 178.1 (2) | C3—C31—C71—C7 | −178.82 (18) |
Symmetry codes: (i) −x, y−1/2, −z+1/2; (ii) −x, −y+2, −z+1; (iii) x, −y+5/2, z+1/2; (iv) x, y+1, z; (v) x, −y+5/2, z−1/2; (vi) x, −y+3/2, z−1/2; (vii) x, y−1, z; (viii) x, −y+3/2, z+1/2; (ix) −x, y+1/2, −z+1/2; (x) −x+1, y−1/2, −z+3/2; (xi) −x+1, y+1/2, −z+3/2. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H11···O2ii | 0.92 (3) | 1.73 (3) | 2.644 (3) | 178 (2) |
C2—H2···O2v | 0.98 (2) | 2.29 (2) | 3.263 (3) | 170 (2) |
Symmetry codes: (ii) −x, −y+2, −z+1; (v) x, −y+5/2, z−1/2. |