In the title compound, {[Co(C
4H
4O
4)(C
18H
10N
4)(H
2O)]·H
2O}
n, each Co
II atom is six-coordinated by two N atoms from one dipyrido[3,2-
a:2′,3′-
c]phenazine ligand, and by four O atoms from two succinate anions (one chelating bidentate and one monodentate) and one water molecule in a distorted
cis-CoN
2O
4 octahedral coordination. The Co
II atoms are bridged by the succinate ligands to generate a helical chain structure. The chain motif is consolidated into a layer structure by O—H
O hydrogen bonds involving the water molecules and carboxylate O atoms.
Supporting information
CCDC reference: 629833
Key indicators
- Single-crystal X-ray study
- T = 292 K
- Mean (C-C) = 0.008 Å
- R factor = 0.074
- wR factor = 0.211
- Data-to-parameter ratio = 15.3
checkCIF/PLATON results
No syntax errors found
Alert level B
DIFMX01_ALERT_2_B The maximum difference density is > 0.1*ZMAX*1.00
_refine_diff_density_max given = 3.078
Test value = 2.700
PLAT094_ALERT_2_B Ratio of Maximum / Minimum Residual Density .... 7.12
PLAT097_ALERT_2_B Maximum (Positive) Residual Density ............ 3.08 e/A
Alert level C
DIFMX02_ALERT_1_C The maximum difference density is > 0.1*ZMAX*0.75
The relevant atom site should be identified.
PLAT341_ALERT_3_C Low Bond Precision on C-C bonds (x 1000) Ang ... 7
0 ALERT level A = In general: serious problem
3 ALERT level B = Potentially serious problem
2 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
3 ALERT type 2 Indicator that the structure model may be wrong or deficient
1 ALERT type 3 Indicator that the structure quality may be low
0 ALERT type 4 Improvement, methodology, query or suggestion
0 ALERT type 5 Informative message, check
Data collection: PROCESS-AUTO (Rigaku, 1998); cell refinement: PROCESS-AUTO; data reduction: PROCESS-AUTO; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL-Plus (Sheldrick, 1990); software used to prepare material for publication: SHELXL97.
catena-Poly[[[aqua(dipyrido[3,2 -
a:2',3'-c]phenazine)cobalt(II)]-µ-succinato] monohydrate]
top
Crystal data top
[Co(C4H4O4)(C18H10N4)(H2O)]·H2O | F(000) = 1012 |
Mr = 493.33 | Dx = 1.569 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 12823 reflections |
a = 8.6818 (17) Å | θ = 3.0–27.5° |
b = 7.8022 (16) Å | µ = 0.87 mm−1 |
c = 30.968 (6) Å | T = 292 K |
β = 95.27 (3)° | Block, red |
V = 2088.9 (7) Å3 | 0.31 × 0.27 × 0.24 mm |
Z = 4 | |
Data collection top
Rigaku R-AXIS RAPID diffractometer | 4741 independent reflections |
Radiation source: rotorating anode | 3215 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.074 |
Detector resolution: 10.0 pixels mm-1 | θmax = 27.5°, θmin = 3.3° |
ω scans | h = −11→11 |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | k = −9→10 |
Tmin = 0.759, Tmax = 0.816 | l = −40→37 |
18973 measured reflections | |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.074 | Hydrogen site location: difmap and geom |
wR(F2) = 0.211 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | w = 1/[σ2(Fo2) + (0.11P)2 + 1.9763P] where P = (Fo2 + 2Fc2)/3 |
4741 reflections | (Δ/σ)max = 0.001 |
310 parameters | Δρmax = 3.08 e Å−3 |
5 restraints | Δρmin = −0.43 e Å−3 |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
C1 | 0.1687 (5) | 0.2986 (6) | 0.73657 (15) | 0.0430 (10) | |
C2 | 0.1010 (5) | 0.4481 (6) | 0.71048 (15) | 0.0475 (11) | |
H2A | −0.0087 | 0.4545 | 0.7140 | 0.057* | |
H2B | 0.1119 | 0.4266 | 0.6801 | 0.057* | |
C3 | 0.1738 (6) | 0.6196 (6) | 0.72261 (15) | 0.0472 (11) | |
H3A | 0.1130 | 0.7095 | 0.7076 | 0.057* | |
H3B | 0.1706 | 0.6376 | 0.7535 | 0.057* | |
C4 | 0.3369 (5) | 0.6341 (5) | 0.71182 (13) | 0.0382 (9) | |
C5 | 0.2173 (6) | −0.0034 (6) | 0.87933 (15) | 0.0485 (11) | |
H5 | 0.2058 | −0.0934 | 0.8596 | 0.058* | |
C6 | 0.1530 (7) | −0.0185 (7) | 0.91811 (17) | 0.0585 (13) | |
H6 | 0.0989 | −0.1169 | 0.9244 | 0.070* | |
C7 | 0.1703 (7) | 0.1159 (7) | 0.94796 (16) | 0.0578 (13) | |
H7 | 0.1284 | 0.1075 | 0.9745 | 0.069* | |
C8 | 0.2501 (6) | 0.2615 (6) | 0.93777 (14) | 0.0465 (11) | |
C9 | 0.3133 (5) | 0.2650 (5) | 0.89771 (13) | 0.0390 (9) | |
C10 | 0.4001 (5) | 0.4130 (5) | 0.88498 (12) | 0.0380 (9) | |
C11 | 0.5328 (6) | 0.5404 (6) | 0.83269 (14) | 0.0472 (11) | |
H11 | 0.5693 | 0.5377 | 0.8054 | 0.057* | |
C12 | 0.5603 (7) | 0.6857 (6) | 0.85834 (16) | 0.0532 (13) | |
H12 | 0.6159 | 0.7774 | 0.8485 | 0.064* | |
C13 | 0.5053 (7) | 0.6921 (6) | 0.89786 (16) | 0.0519 (12) | |
H13 | 0.5229 | 0.7886 | 0.9152 | 0.062* | |
C14 | 0.4228 (6) | 0.5550 (6) | 0.91247 (13) | 0.0428 (10) | |
C15 | 0.3547 (6) | 0.5556 (6) | 0.95388 (13) | 0.0452 (11) | |
C16 | 0.2701 (6) | 0.4100 (7) | 0.96631 (13) | 0.0471 (11) | |
C17 | 0.2216 (7) | 0.5495 (8) | 1.02874 (15) | 0.0628 (15) | |
C18 | 0.3077 (7) | 0.6920 (7) | 1.01627 (15) | 0.0590 (14) | |
C19 | 0.3243 (8) | 0.8376 (8) | 1.04357 (17) | 0.0727 (18) | |
H19 | 0.3806 | 0.9318 | 1.0354 | 0.087* | |
C20 | 0.2579 (9) | 0.8397 (11) | 1.0818 (2) | 0.085 (2) | |
H20 | 0.2681 | 0.9356 | 1.0997 | 0.102* | |
C21 | 0.1750 (9) | 0.6984 (12) | 1.09397 (18) | 0.090 (3) | |
H21 | 0.1315 | 0.7017 | 1.1203 | 0.108* | |
C22 | 0.1544 (8) | 0.5541 (10) | 1.06890 (16) | 0.0733 (18) | |
H22 | 0.0980 | 0.4615 | 1.0779 | 0.088* | |
N1 | 0.4560 (4) | 0.4050 (4) | 0.84584 (11) | 0.0394 (8) | |
N2 | 0.2953 (5) | 0.1355 (5) | 0.86886 (12) | 0.0422 (8) | |
N3 | 0.2040 (5) | 0.4069 (6) | 1.00327 (12) | 0.0573 (11) | |
N4 | 0.3752 (5) | 0.6932 (5) | 0.97869 (12) | 0.0534 (11) | |
O1 | 0.2278 (4) | 0.3294 (4) | 0.77472 (10) | 0.0508 (8) | |
O2 | 0.1612 (4) | 0.1528 (4) | 0.71977 (11) | 0.0553 (9) | |
O1W | 0.3003 (4) | −0.0376 (4) | 0.78083 (10) | 0.0480 (8) | |
O3 | 0.3794 (4) | 0.5638 (4) | 0.67832 (9) | 0.0464 (8) | |
O2W | −0.0779 (8) | 0.0431 (9) | 0.65845 (14) | 0.113 (2) | |
H22W | 0.006 (7) | 0.077 (13) | 0.677 (2) | 0.170* | |
H21W | −0.139 (9) | −0.017 (12) | 0.676 (2) | 0.170* | |
O4 | 0.4358 (4) | 0.7225 (4) | 0.73540 (10) | 0.0468 (8) | |
Co1 | 0.39350 (7) | 0.18197 (7) | 0.809548 (17) | 0.0385 (2) | |
H11W | 0.230 (5) | 0.002 (6) | 0.7585 (13) | 0.058* | |
H12W | 0.349 (6) | −0.125 (5) | 0.7674 (15) | 0.058* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.034 (2) | 0.048 (2) | 0.048 (2) | −0.0015 (19) | 0.0039 (18) | −0.002 (2) |
C2 | 0.032 (2) | 0.059 (3) | 0.051 (2) | −0.001 (2) | 0.0002 (19) | −0.002 (2) |
C3 | 0.046 (3) | 0.045 (2) | 0.051 (2) | 0.009 (2) | 0.011 (2) | 0.006 (2) |
C4 | 0.041 (2) | 0.0334 (19) | 0.041 (2) | 0.0057 (18) | 0.0063 (18) | 0.0067 (17) |
C5 | 0.046 (3) | 0.045 (2) | 0.054 (3) | 0.000 (2) | 0.001 (2) | 0.004 (2) |
C6 | 0.062 (4) | 0.055 (3) | 0.061 (3) | −0.007 (3) | 0.013 (3) | 0.015 (2) |
C7 | 0.061 (4) | 0.068 (3) | 0.047 (2) | −0.003 (3) | 0.014 (2) | 0.014 (2) |
C8 | 0.045 (3) | 0.054 (3) | 0.041 (2) | 0.010 (2) | 0.0051 (19) | 0.010 (2) |
C9 | 0.041 (2) | 0.040 (2) | 0.036 (2) | 0.0066 (18) | 0.0037 (17) | 0.0032 (18) |
C10 | 0.044 (3) | 0.037 (2) | 0.0330 (19) | 0.0057 (18) | −0.0005 (17) | 0.0003 (17) |
C11 | 0.062 (3) | 0.043 (2) | 0.039 (2) | 0.000 (2) | 0.015 (2) | 0.0013 (19) |
C12 | 0.073 (4) | 0.039 (2) | 0.048 (3) | −0.008 (2) | 0.013 (2) | 0.001 (2) |
C13 | 0.070 (4) | 0.038 (2) | 0.047 (2) | −0.002 (2) | 0.001 (2) | −0.0068 (19) |
C14 | 0.044 (3) | 0.045 (2) | 0.038 (2) | 0.008 (2) | 0.0016 (18) | 0.0001 (19) |
C15 | 0.049 (3) | 0.052 (3) | 0.0333 (19) | 0.014 (2) | 0.0003 (18) | −0.0022 (19) |
C16 | 0.044 (3) | 0.066 (3) | 0.0307 (19) | 0.012 (2) | 0.0022 (18) | 0.001 (2) |
C17 | 0.060 (4) | 0.093 (4) | 0.035 (2) | 0.030 (3) | 0.001 (2) | −0.002 (3) |
C18 | 0.062 (3) | 0.077 (4) | 0.036 (2) | 0.023 (3) | −0.005 (2) | −0.008 (2) |
C19 | 0.079 (5) | 0.088 (4) | 0.047 (3) | 0.024 (3) | −0.010 (3) | −0.026 (3) |
C20 | 0.092 (5) | 0.114 (6) | 0.047 (3) | 0.037 (5) | 0.000 (3) | −0.025 (3) |
C21 | 0.086 (5) | 0.147 (7) | 0.037 (3) | 0.044 (5) | 0.009 (3) | −0.018 (4) |
C22 | 0.066 (4) | 0.112 (5) | 0.043 (3) | 0.018 (4) | 0.011 (2) | −0.003 (3) |
N1 | 0.040 (2) | 0.0422 (19) | 0.0360 (17) | 0.0015 (16) | 0.0046 (15) | 0.0025 (15) |
N2 | 0.042 (2) | 0.0414 (18) | 0.0436 (19) | 0.0028 (16) | 0.0071 (16) | 0.0005 (16) |
N3 | 0.055 (3) | 0.080 (3) | 0.0379 (19) | 0.010 (2) | 0.0106 (18) | 0.003 (2) |
N4 | 0.063 (3) | 0.058 (2) | 0.0384 (19) | 0.015 (2) | −0.0003 (18) | −0.0111 (18) |
O1 | 0.057 (2) | 0.0472 (18) | 0.0468 (17) | 0.0088 (16) | −0.0031 (15) | −0.0103 (14) |
O2 | 0.056 (2) | 0.0508 (19) | 0.0579 (19) | −0.0029 (16) | −0.0010 (16) | −0.0129 (16) |
O1W | 0.051 (2) | 0.0415 (17) | 0.0531 (18) | −0.0037 (15) | 0.0120 (15) | −0.0127 (15) |
O3 | 0.049 (2) | 0.0514 (17) | 0.0399 (15) | −0.0001 (15) | 0.0092 (14) | −0.0075 (14) |
O2W | 0.095 (4) | 0.177 (6) | 0.065 (3) | −0.063 (4) | −0.004 (3) | −0.010 (3) |
O4 | 0.052 (2) | 0.0444 (16) | 0.0451 (16) | −0.0013 (15) | 0.0114 (15) | −0.0088 (14) |
Co1 | 0.0426 (4) | 0.0365 (3) | 0.0369 (3) | −0.0002 (2) | 0.0068 (2) | −0.0037 (2) |
Geometric parameters (Å, º) top
C1—O2 | 1.250 (5) | C12—H12 | 0.9300 |
C1—O1 | 1.267 (5) | C13—C14 | 1.386 (7) |
C1—C2 | 1.507 (6) | C13—H13 | 0.9300 |
C2—C3 | 1.512 (7) | C14—C15 | 1.460 (6) |
C2—H2A | 0.9700 | C15—N4 | 1.323 (6) |
C2—H2B | 0.9700 | C15—C16 | 1.425 (7) |
C3—C4 | 1.489 (7) | C16—N3 | 1.327 (6) |
C3—H3A | 0.9700 | C17—N3 | 1.364 (7) |
C3—H3B | 0.9700 | C17—C18 | 1.413 (9) |
C4—O3 | 1.258 (5) | C17—C22 | 1.421 (7) |
C4—O4 | 1.277 (6) | C18—N4 | 1.350 (7) |
C4—Co1i | 2.518 (5) | C18—C19 | 1.415 (7) |
C5—N2 | 1.334 (6) | C19—C20 | 1.365 (9) |
C5—C6 | 1.375 (7) | C19—H19 | 0.9300 |
C5—H5 | 0.9300 | C20—C21 | 1.388 (11) |
C6—C7 | 1.397 (8) | C20—H20 | 0.9300 |
C6—H6 | 0.9300 | C21—C22 | 1.370 (10) |
C7—C8 | 1.382 (7) | C21—H21 | 0.9300 |
C7—H7 | 0.9300 | C22—H22 | 0.9300 |
C8—C9 | 1.402 (6) | Co1—N1 | 2.115 (4) |
C8—C16 | 1.458 (7) | Co1—N2 | 2.126 (4) |
C9—N2 | 1.348 (6) | Co1—O1 | 2.067 (3) |
C9—C10 | 1.453 (6) | Co1—O1W | 2.061 (3) |
C10—N1 | 1.348 (5) | Co1—O3ii | 2.177 (3) |
C10—C14 | 1.400 (6) | Co1—O4ii | 2.147 (3) |
C11—N1 | 1.332 (6) | O1W—H11W | 0.93 (4) |
C11—C12 | 1.392 (6) | O1W—H12W | 0.92 (4) |
C11—H11 | 0.9300 | O2W—H22W | 0.92 (7) |
C12—C13 | 1.355 (7) | O2W—H21W | 0.92 (7) |
| | | |
O2—C1—O1 | 124.2 (4) | C16—C15—C14 | 119.7 (4) |
O2—C1—C2 | 118.6 (4) | N3—C16—C15 | 121.5 (4) |
O1—C1—C2 | 117.2 (4) | N3—C16—C8 | 118.1 (5) |
C1—C2—C3 | 114.7 (4) | C15—C16—C8 | 120.4 (4) |
C1—C2—H2A | 108.6 | N3—C17—C18 | 121.1 (5) |
C3—C2—H2A | 108.6 | N3—C17—C22 | 119.6 (6) |
C1—C2—H2B | 108.6 | C18—C17—C22 | 119.3 (6) |
C3—C2—H2B | 108.6 | N4—C18—C17 | 121.5 (5) |
H2A—C2—H2B | 107.6 | N4—C18—C19 | 118.7 (6) |
C4—C3—C2 | 113.3 (4) | C17—C18—C19 | 119.7 (5) |
C4—C3—H3A | 108.9 | C20—C19—C18 | 120.0 (7) |
C2—C3—H3A | 108.9 | C20—C19—H19 | 120.0 |
C4—C3—H3B | 108.9 | C18—C19—H19 | 120.0 |
C2—C3—H3B | 108.9 | C19—C20—C21 | 119.8 (6) |
H3A—C3—H3B | 107.7 | C19—C20—H20 | 120.1 |
O3—C4—O4 | 118.3 (4) | C21—C20—H20 | 120.1 |
O3—C4—C3 | 120.6 (4) | C22—C21—C20 | 122.9 (6) |
O4—C4—C3 | 121.1 (4) | C22—C21—H21 | 118.5 |
O3—C4—Co1i | 59.9 (2) | C20—C21—H21 | 118.5 |
O4—C4—Co1i | 58.5 (2) | C21—C22—C17 | 118.3 (7) |
C3—C4—Co1i | 175.2 (3) | C21—C22—H22 | 120.9 |
N2—C5—C6 | 122.6 (5) | C17—C22—H22 | 120.9 |
N2—C5—H5 | 118.7 | C11—N1—C10 | 118.0 (4) |
C6—C5—H5 | 118.7 | C11—N1—Co1 | 126.9 (3) |
C5—C6—C7 | 119.1 (5) | C10—N1—Co1 | 114.8 (3) |
C5—C6—H6 | 120.5 | C5—N2—C9 | 118.5 (4) |
C7—C6—H6 | 120.5 | C5—N2—Co1 | 127.0 (3) |
C8—C7—C6 | 119.4 (4) | C9—N2—Co1 | 114.5 (3) |
C8—C7—H7 | 120.3 | C16—N3—C17 | 116.7 (5) |
C6—C7—H7 | 120.3 | C15—N4—C18 | 116.7 (5) |
C7—C8—C9 | 117.6 (5) | C1—O1—Co1 | 125.7 (3) |
C7—C8—C16 | 123.3 (4) | Co1—O1W—H11W | 104 (3) |
C9—C8—C16 | 119.1 (4) | Co1—O1W—H12W | 129 (4) |
N2—C9—C8 | 122.8 (4) | H11W—O1W—H12W | 102 (4) |
N2—C9—C10 | 116.5 (4) | C4—O3—Co1i | 90.2 (3) |
C8—C9—C10 | 120.7 (4) | H22W—O2W—H21W | 104 (3) |
N1—C10—C14 | 122.8 (4) | C4—O4—Co1i | 91.0 (3) |
N1—C10—C9 | 116.5 (4) | O1W—Co1—O1 | 90.61 (14) |
C14—C10—C9 | 120.8 (4) | O1W—Co1—N1 | 169.90 (14) |
N1—C11—C12 | 122.4 (4) | O1—Co1—N1 | 87.24 (13) |
N1—C11—H11 | 118.8 | O1W—Co1—N2 | 93.36 (14) |
C12—C11—H11 | 118.8 | O1—Co1—N2 | 103.34 (15) |
C13—C12—C11 | 119.2 (5) | N1—Co1—N2 | 77.57 (14) |
C13—C12—H12 | 120.4 | O1W—Co1—O4ii | 96.28 (13) |
C11—C12—H12 | 120.4 | O1—Co1—O4ii | 93.93 (14) |
C12—C13—C14 | 120.2 (4) | N1—Co1—O4ii | 93.71 (13) |
C12—C13—H13 | 119.9 | N2—Co1—O4ii | 160.12 (15) |
C14—C13—H13 | 119.9 | O1W—Co1—O3ii | 92.05 (14) |
C13—C14—C10 | 117.4 (4) | O1—Co1—O3ii | 154.36 (14) |
C13—C14—C15 | 123.2 (4) | N1—Co1—O3ii | 94.16 (14) |
C10—C14—C15 | 119.4 (4) | N2—Co1—O3ii | 101.96 (13) |
N4—C15—C16 | 122.4 (4) | O4ii—Co1—O3ii | 60.43 (12) |
N4—C15—C14 | 118.0 (5) | | |
| | | |
C1—C2—C3—C4 | 67.6 (5) | | |
Symmetry codes: (i) −x+1, y+1/2, −z+3/2; (ii) −x+1, y−1/2, −z+3/2. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H11W···O2 | 0.93 (4) | 1.75 (3) | 2.612 (5) | 154 (5) |
O1W—H12W···O4iii | 0.92 (4) | 1.76 (2) | 2.678 (4) | 172 (5) |
O2W—H21W···O1iv | 0.92 (7) | 2.14 (8) | 3.041 (6) | 165 (9) |
O2W—H22W···O2 | 0.92 (7) | 1.90 (6) | 2.815 (6) | 173 (10) |
Symmetry codes: (iii) x, y−1, z; (iv) −x, y−1/2, −z+3/2. |