The enone fragment, the thiophene ring and the benzene ring of the title molecule, C
13H
9ClOS, are all essentially individually planar. The thiophene ring is disordered over two sites, corresponding to a rotation of approximately 180° about the single C—C bond to which it is attached. The crystal packing is stabilized by weak intermolecular C—H
π interactions involving thiophene rings and benzene rings, and molecules are stacked along the
b axis.
Supporting information
CCDC reference: 618263
Key indicators
- Single-crystal X-ray study
- T = 100 K
- Mean (C-C) = 0.001 Å
- Disorder in main residue
- R factor = 0.031
- wR factor = 0.089
- Data-to-parameter ratio = 33.4
checkCIF/PLATON results
No syntax errors found
Alert level C
PLAT301_ALERT_3_C Main Residue Disorder ......................... 20.00 Perc.
PLAT431_ALERT_2_C Short Inter HL..A Contact Cl1 .. S1B .. 3.46 Ang.
PLAT480_ALERT_4_C Long H...A H-Bond Reported H2A .. CG1 .. 2.90 Ang.
PLAT480_ALERT_4_C Long H...A H-Bond Reported H2A .. CG2 .. 2.90 Ang.
PLAT480_ALERT_4_C Long H...A H-Bond Reported H9A .. CG3 .. 2.98 Ang.
PLAT480_ALERT_4_C Long H...A H-Bond Reported H11A .. CG3 .. 2.89 Ang.
0 ALERT level A = In general: serious problem
0 ALERT level B = Potentially serious problem
6 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
1 ALERT type 2 Indicator that the structure model may be wrong or deficient
1 ALERT type 3 Indicator that the structure quality may be low
4 ALERT type 4 Improvement, methodology, query or suggestion
Data collection: APEX2 (Bruker, 2005); cell refinement: SAINT (Bruker, 2005); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 1998); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL, PARST (Nardelli, 1995) and PLATON (Spek, 2003).
1-(4-Chlorophenyl)-3-(2-thienyl)prop-2-en-1-one
top
Crystal data top
C13H9ClOS | Z = 2 |
Mr = 248.71 | F(000) = 256 |
Triclinic, P1 | Dx = 1.494 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 5.7956 (1) Å | Cell parameters from 8665 reflections |
b = 7.3397 (1) Å | θ = 1.6–37.5° |
c = 13.3905 (2) Å | µ = 0.51 mm−1 |
α = 78.634 (1)° | T = 100 K |
β = 81.928 (1)° | Block, yellow |
γ = 88.964 (1)° | 0.56 × 0.54 × 0.23 mm |
V = 552.87 (1) Å3 | |
Data collection top
Bruker SMART APEX2 CCD area-detector diffractometer | 5770 independent reflections |
Radiation source: fine-focus sealed tube | 5316 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.019 |
Detector resolution: 8.33 pixels mm-1 | θmax = 37.5°, θmin = 1.6° |
ω scans | h = −9→9 |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | k = −12→12 |
Tmin = 0.810, Tmax = 0.892 | l = −22→22 |
28531 measured reflections | |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.031 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.089 | H-atom parameters constrained |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0455P)2 + 0.1565P] where P = (Fo2 + 2Fc2)/3 |
5770 reflections | (Δ/σ)max = 0.001 |
173 parameters | Δρmax = 0.96 e Å−3 |
0 restraints | Δρmin = −0.86 e Å−3 |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
Cl1 | 0.60400 (3) | 0.27687 (3) | 0.462496 (13) | 0.02085 (5) | |
O1 | 0.28076 (9) | 0.71158 (9) | 0.01951 (4) | 0.01932 (10) | |
C1 | 0.73297 (11) | 0.51495 (9) | 0.16487 (5) | 0.01417 (10) | |
H1A | 0.8577 | 0.5266 | 0.1120 | 0.017* | |
C2 | 0.75767 (11) | 0.41275 (9) | 0.26219 (5) | 0.01457 (10) | |
H2A | 0.8968 | 0.3530 | 0.2743 | 0.017* | |
C3 | 0.57153 (11) | 0.40139 (9) | 0.34088 (5) | 0.01395 (10) | |
C4 | 0.35991 (11) | 0.48730 (9) | 0.32491 (5) | 0.01458 (10) | |
H4A | 0.2378 | 0.4795 | 0.3787 | 0.017* | |
C5 | 0.33496 (11) | 0.58483 (9) | 0.22705 (5) | 0.01363 (10) | |
H5A | 0.1936 | 0.6406 | 0.2148 | 0.016* | |
C6 | 0.52080 (11) | 0.60004 (9) | 0.14654 (5) | 0.01264 (9) | |
C7 | 0.47991 (11) | 0.70026 (9) | 0.04204 (5) | 0.01372 (10) | |
C8 | 0.68235 (11) | 0.78410 (9) | −0.03095 (5) | 0.01502 (10) | |
H8A | 0.8255 | 0.7927 | −0.0082 | 0.018* | |
C9 | 0.65982 (11) | 0.84822 (9) | −0.13066 (5) | 0.01373 (10) | |
H9A | 0.5172 | 0.8286 | −0.1513 | 0.016* | |
C10 | 0.83865 (11) | 0.94470 (9) | −0.20798 (5) | 0.01370 (10) | |
S1A | 1.0876 (2) | 1.0284 (2) | −0.18189 (11) | 0.01370 (16) | 0.4802 (12) |
C12A | 1.0662 (17) | 1.1045 (18) | −0.3684 (10) | 0.0198 (11) | 0.4802 (12) |
H12A | 1.1215 | 1.1597 | −0.4360 | 0.024* | 0.4802 (12) |
C11A | 1.1842 (11) | 1.1039 (8) | −0.2865 (3) | 0.0157 (6) | 0.4802 (12) |
H11A | 1.3339 | 1.1547 | −0.2993 | 0.019* | 0.4802 (12) |
C13A | 0.80765 (5) | 0.99226 (4) | −0.33091 (2) | 0.01874 (7) | 0.4802 (12) |
H13A | 0.6898 | 0.9664 | −0.3668 | 0.022* | 0.4802 (12) |
S1B | 0.80765 (5) | 0.99226 (4) | −0.33091 (2) | 0.01874 (7) | 0.5198 (12) |
C13B | 1.0571 (9) | 1.0142 (8) | −0.1938 (4) | 0.0147 (5) | 0.5198 (12) |
H13B | 1.1188 | 1.0008 | −0.1323 | 0.018* | 0.5198 (12) |
C11B | 1.0277 (15) | 1.0939 (16) | −0.3719 (9) | 0.0188 (9) | 0.5198 (12) |
H11B | 1.0634 | 1.1386 | −0.4423 | 0.023* | 0.5198 (12) |
C12B | 1.1788 (11) | 1.1230 (9) | −0.3080 (3) | 0.0176 (6) | 0.5198 (12) |
H12C | 1.3189 | 1.1892 | −0.3248 | 0.021* | 0.5198 (12) |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Cl1 | 0.02433 (9) | 0.02232 (8) | 0.01409 (7) | 0.00457 (6) | −0.00354 (5) | 0.00100 (5) |
O1 | 0.0135 (2) | 0.0276 (3) | 0.0160 (2) | −0.00159 (17) | −0.00344 (16) | −0.00098 (18) |
C1 | 0.0122 (2) | 0.0163 (2) | 0.0140 (2) | 0.00020 (18) | −0.00089 (17) | −0.00360 (19) |
C2 | 0.0129 (2) | 0.0154 (2) | 0.0156 (2) | 0.00131 (18) | −0.00237 (18) | −0.00325 (19) |
C3 | 0.0154 (2) | 0.0135 (2) | 0.0129 (2) | 0.00058 (18) | −0.00262 (18) | −0.00182 (18) |
C4 | 0.0136 (2) | 0.0159 (2) | 0.0133 (2) | 0.00029 (18) | −0.00030 (17) | −0.00173 (18) |
C5 | 0.0119 (2) | 0.0146 (2) | 0.0139 (2) | 0.00010 (17) | −0.00105 (17) | −0.00207 (18) |
C6 | 0.0122 (2) | 0.0135 (2) | 0.0122 (2) | −0.00114 (17) | −0.00149 (16) | −0.00258 (17) |
C7 | 0.0136 (2) | 0.0153 (2) | 0.0121 (2) | −0.00143 (18) | −0.00158 (17) | −0.00252 (18) |
C8 | 0.0142 (2) | 0.0173 (2) | 0.0131 (2) | −0.00291 (19) | −0.00139 (18) | −0.00190 (19) |
C9 | 0.0133 (2) | 0.0138 (2) | 0.0136 (2) | −0.00082 (18) | −0.00127 (17) | −0.00172 (18) |
C10 | 0.0136 (2) | 0.0129 (2) | 0.0141 (2) | −0.00023 (17) | −0.00066 (17) | −0.00223 (18) |
S1A | 0.0122 (3) | 0.0157 (2) | 0.0134 (4) | −0.0004 (2) | −0.0035 (2) | −0.0021 (2) |
C12A | 0.023 (2) | 0.0176 (11) | 0.016 (2) | −0.0015 (15) | 0.0023 (16) | −0.0004 (11) |
C11A | 0.0120 (7) | 0.0159 (13) | 0.0191 (16) | −0.0013 (8) | −0.0016 (12) | −0.0037 (12) |
C13A | 0.01665 (12) | 0.01743 (12) | 0.01990 (13) | −0.00056 (8) | 0.00040 (8) | −0.00029 (9) |
S1B | 0.01665 (12) | 0.01743 (12) | 0.01990 (13) | −0.00056 (8) | 0.00040 (8) | −0.00029 (9) |
C13B | 0.0139 (13) | 0.0190 (11) | 0.0115 (10) | 0.0015 (8) | −0.0043 (7) | −0.0021 (7) |
C11B | 0.027 (3) | 0.0180 (16) | 0.0117 (8) | 0.0029 (17) | −0.0033 (18) | −0.0023 (9) |
C12B | 0.0153 (8) | 0.0172 (11) | 0.0185 (15) | −0.0006 (7) | 0.0014 (11) | −0.0016 (11) |
Geometric parameters (Å, º) top
Cl1—C3 | 1.7366 (7) | C9—C10 | 1.4436 (9) |
O1—C7 | 1.2307 (8) | C9—H9A | 0.9300 |
C1—C2 | 1.3945 (9) | C10—C13B | 1.424 (4) |
C1—C6 | 1.3996 (9) | C10—C13A | 1.6486 (7) |
C1—H1A | 0.9300 | C10—S1A | 1.6852 (11) |
C2—C3 | 1.3894 (9) | S1A—C11A | 1.438 (5) |
C2—H2A | 0.9300 | C12A—C11A | 1.370 (12) |
C3—C4 | 1.3929 (9) | C12A—C13A | 1.687 (9) |
C4—C5 | 1.3893 (9) | C12A—H12A | 0.9300 |
C4—H4A | 0.9300 | C11A—H11A | 0.9300 |
C5—C6 | 1.4020 (9) | C13A—H13A | 0.9300 |
C5—H5A | 0.9300 | C13B—C12B | 1.646 (7) |
C6—C7 | 1.4955 (9) | C13B—H13B | 0.9300 |
C7—C8 | 1.4756 (9) | C11B—C12B | 1.354 (11) |
C8—C9 | 1.3492 (9) | C11B—H11B | 0.9300 |
C8—H8A | 0.9300 | C12B—H12C | 0.9300 |
| | | |
C2—C1—C6 | 120.11 (6) | C8—C9—H9A | 117.3 |
C2—C1—H1A | 119.9 | C10—C9—H9A | 117.3 |
C6—C1—H1A | 119.9 | C13B—C10—C9 | 128.1 (2) |
C3—C2—C1 | 119.10 (6) | C13B—C10—C13A | 110.0 (2) |
C3—C2—H2A | 120.4 | C9—C10—C13A | 121.83 (5) |
C1—C2—H2A | 120.4 | C9—C10—S1A | 124.09 (7) |
C2—C3—C4 | 121.81 (6) | C13A—C10—S1A | 114.01 (6) |
C2—C3—Cl1 | 119.04 (5) | C11A—S1A—C10 | 96.9 (3) |
C4—C3—Cl1 | 119.15 (5) | C11A—C12A—C13A | 111.4 (8) |
C5—C4—C3 | 118.67 (6) | C11A—C12A—H12A | 124.3 |
C5—C4—H4A | 120.7 | C13A—C12A—H12A | 124.3 |
C3—C4—H4A | 120.7 | C12A—C11A—S1A | 123.1 (6) |
C4—C5—C6 | 120.66 (6) | C12A—C11A—H11A | 118.5 |
C4—C5—H5A | 119.7 | S1A—C11A—H11A | 118.5 |
C6—C5—H5A | 119.7 | C10—C13A—C12A | 94.4 (4) |
C1—C6—C5 | 119.61 (6) | C10—C13A—H13A | 132.8 |
C1—C6—C7 | 122.26 (6) | C12A—C13A—H13A | 132.8 |
C5—C6—C7 | 118.07 (6) | C10—C13B—C12B | 106.3 (3) |
O1—C7—C8 | 122.03 (6) | C10—C13B—H13B | 126.8 |
O1—C7—C6 | 119.68 (6) | C12B—C13B—H13B | 126.8 |
C8—C7—C6 | 118.29 (6) | C12B—C11B—H11B | 119.7 |
C9—C8—C7 | 120.00 (6) | C11B—C12B—C13B | 103.9 (6) |
C9—C8—H8A | 120.0 | C11B—C12B—H12C | 128.0 |
C7—C8—H8A | 120.0 | C13B—C12B—H12C | 128.0 |
C8—C9—C10 | 125.46 (6) | | |
| | | |
C6—C1—C2—C3 | −1.84 (10) | C8—C9—C10—C13B | −9.6 (3) |
C1—C2—C3—C4 | 0.84 (10) | C8—C9—C10—C13A | 171.39 (6) |
C1—C2—C3—Cl1 | −179.07 (5) | C8—C9—C10—S1A | −12.02 (12) |
C2—C3—C4—C5 | 0.78 (10) | C13B—C10—S1A—C11A | 25 (4) |
Cl1—C3—C4—C5 | −179.30 (5) | C9—C10—S1A—C11A | 179.9 (3) |
C3—C4—C5—C6 | −1.42 (10) | C13A—C10—S1A—C11A | −3.3 (3) |
C2—C1—C6—C5 | 1.21 (10) | C13A—C12A—C11A—S1A | −4.4 (13) |
C2—C1—C6—C7 | −175.78 (6) | C10—S1A—C11A—C12A | 4.7 (9) |
C4—C5—C6—C1 | 0.45 (10) | C13B—C10—C13A—C12A | −1.0 (5) |
C4—C5—C6—C7 | 177.56 (6) | C9—C10—C13A—C12A | 178.2 (5) |
C1—C6—C7—O1 | 152.83 (7) | S1A—C10—C13A—C12A | 1.3 (5) |
C5—C6—C7—O1 | −24.21 (9) | C11A—C12A—C13A—C10 | 1.3 (9) |
C1—C6—C7—C8 | −27.58 (9) | C9—C10—C13B—C12B | −176.2 (3) |
C5—C6—C7—C8 | 155.39 (6) | C13A—C10—C13B—C12B | 2.9 (4) |
O1—C7—C8—C9 | −11.43 (11) | S1A—C10—C13B—C12B | −150 (4) |
C6—C7—C8—C9 | 168.99 (6) | C10—C13B—C12B—C11B | −3.4 (8) |
C7—C8—C9—C10 | 175.33 (6) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
C2—H2A···Cg1i | 0.93 | 2.90 | 3.559 (3) | 129 |
C2—H2A···Cg2i | 0.93 | 2.90 | 3.538 (3) | 127 |
C5—H5A···Cg1ii | 0.93 | 2.84 | 3.467 (3) | 126 |
C5—H5A···Cg2ii | 0.93 | 2.82 | 3.475 (3) | 128 |
C9—H9A···Cg3iii | 0.93 | 2.98 | 3.528 (1) | 119 |
C12B—H12C···Cg3iv | 0.93 | 2.87 | 3.518 (6) | 128 |
C11A—H11A···Cg3iv | 0.93 | 2.89 | 3.501 (6) | 124 |
Symmetry codes: (i) −x+2, −y+1, −z; (ii) −x+1, −y+2, −z; (iii) −x+1, −y+1, −z; (iv) −x+2, −y+2, −z. |