A polymorphic transition as a result of grinding was found for 3-[1-(tert-butoxycarbonyl)azetidin-3-yl]-1,2-oxazole-4-carboxylic acid. The thorough study of polymorphic structures before and after crystal structure transformation has revealed some pre-conditions for a polymorphic transition and regularities of changes in molecular and crystal structure. In metastable polymorph 1a, the conformationally flexible molecule adopts a conformation with the higher energy and forms a less preferable linear supramolecular synthon. Additional energy imparted to a crystal structure during the grinding process proved to be enough to overcome low energy barriers for the nitrogen inversion and rotation of the oxazole ring around the sp3–sp2 single bond. As a result, polymorph 1b with a molecule adopting conformation with lower energy and forming a more preferable centrosymmetric supramolecular synthon was obtained. The study of pairwise interaction energies in the two polymorphs has shown that metastable polymorph 1a is organized by molecular building units and has a columnar-layered structure. A centrosymmetric dimer should be recognized as a complex building unit in more stable polymorph 1b, which has a layered structure.
Supporting information
CCDC references: 2106029; 2106030
For both structures, program(s) used to solve structure: SHELXT 2014/5 (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2016/6 (Sheldrick, 2015b); molecular graphics: Mercury 3.1 (Macrae et al., 2008).
Crystal data top
C12H16N2O5 | F(000) = 1136 |
Mr = 268.27 | Dx = 1.350 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
a = 16.0117 (9) Å | Cell parameters from 2536 reflections |
b = 9.6657 (9) Å | θ = 3.2–30.1° |
c = 17.4382 (9) Å | µ = 0.11 mm−1 |
β = 101.948 (7)° | T = 100 K |
V = 2640.3 (3) Å3 | Block, colorless |
Z = 8 | 0.05 × 0.04 × 0.03 mm |
Data collection top
Xcalibur, Sapphire3 diffractometer | 2322 independent reflections |
Radiation source: Enhance (Mo) X-ray Source | 1625 reflections with I > 2σ(I) |
Detector resolution: 16.1827 pixels mm-1 | Rint = 0.039 |
ω scans | θmax = 25.0°, θmin = 2.9° |
Absorption correction: multi-scan CrysAlis RED, Agilent Technologies,
Version 1.171.36.24 (release 03-12-2012 CrysAlis171 .NET)
(compiled Dec 3 2012,18:21:49)
Empirical absorption correction using spherical harmonics,
implemented in SCALE3 ABSPACK scaling algorithm. | h = −18→18 |
Tmin = 0.815, Tmax = 1.000 | k = −11→11 |
8636 measured reflections | l = −20→16 |
Refinement top
Refinement on F2 | 0 restraints |
Least-squares matrix: full | Hydrogen site location: mixed |
R[F2 > 2σ(F2)] = 0.043 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.109 | w = 1/[σ2(Fo2) + (0.043P)2 + 1.7721P] where P = (Fo2 + 2Fc2)/3 |
S = 1.03 | (Δ/σ)max < 0.001 |
2322 reflections | Δρmax = 0.19 e Å−3 |
179 parameters | Δρmin = −0.17 e Å−3 |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 0.45741 (12) | 0.44939 (16) | 0.06163 (10) | 0.0654 (6) | |
O2 | 0.65464 (10) | −0.05836 (14) | 0.30980 (8) | 0.0435 (4) | |
O3 | 0.66246 (9) | 0.11553 (13) | 0.39920 (7) | 0.0342 (4) | |
O4 | 0.66508 (12) | 0.61671 (17) | 0.25829 (11) | 0.0693 (6) | |
O5 | 0.57402 (11) | 0.77584 (16) | 0.19748 (9) | 0.0474 (4) | |
H5O | 0.6060 (19) | 0.832 (3) | 0.2375 (17) | 0.081 (9)* | |
N1 | 0.51646 (13) | 0.34353 (19) | 0.09260 (11) | 0.0509 (6) | |
N2 | 0.63376 (13) | 0.16536 (17) | 0.27403 (9) | 0.0429 (5) | |
C1 | 0.57312 (14) | 0.4043 (2) | 0.14704 (12) | 0.0392 (5) | |
C2 | 0.55512 (15) | 0.5475 (2) | 0.15364 (12) | 0.0432 (6) | |
C3 | 0.48293 (17) | 0.5669 (2) | 0.09928 (15) | 0.0578 (7) | |
H3 | 0.454053 | 0.652889 | 0.089148 | 0.069* | |
C4 | 0.64475 (14) | 0.3225 (2) | 0.19380 (12) | 0.0410 (5) | |
H4 | 0.701220 | 0.353292 | 0.183937 | 0.049* | |
C5 | 0.63568 (15) | 0.1632 (2) | 0.19018 (12) | 0.0412 (5) | |
H5A | 0.582004 | 0.130369 | 0.156175 | 0.049* | |
H5B | 0.685808 | 0.114773 | 0.177938 | 0.049* | |
C6 | 0.64507 (15) | 0.3152 (2) | 0.28293 (12) | 0.0429 (6) | |
H6A | 0.699911 | 0.343007 | 0.316999 | 0.051* | |
H6B | 0.596392 | 0.363402 | 0.298137 | 0.051* | |
C7 | 0.65100 (13) | 0.0643 (2) | 0.32655 (11) | 0.0340 (5) | |
C8 | 0.66530 (14) | 0.0257 (2) | 0.46809 (12) | 0.0383 (5) | |
C9 | 0.5891 (2) | −0.0688 (3) | 0.45437 (16) | 0.0874 (11) | |
H9A | 0.536740 | −0.013625 | 0.441267 | 0.131* | |
H9B | 0.588860 | −0.122652 | 0.501948 | 0.131* | |
H9C | 0.592030 | −0.131782 | 0.410962 | 0.131* | |
C10 | 0.7494 (2) | −0.0512 (3) | 0.48436 (16) | 0.0736 (9) | |
H10A | 0.749540 | −0.119967 | 0.443102 | 0.110* | |
H10B | 0.756825 | −0.097921 | 0.535206 | 0.110* | |
H10C | 0.796211 | 0.014457 | 0.485332 | 0.110* | |
C11 | 0.66054 (16) | 0.1281 (2) | 0.53251 (12) | 0.0455 (6) | |
H11A | 0.711527 | 0.186859 | 0.541758 | 0.068* | |
H11B | 0.657450 | 0.078037 | 0.580712 | 0.068* | |
H11C | 0.609553 | 0.185872 | 0.516851 | 0.068* | |
C12 | 0.60401 (15) | 0.6484 (2) | 0.20832 (13) | 0.0426 (6) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.0700 (12) | 0.0450 (10) | 0.0621 (11) | −0.0083 (9) | −0.0306 (9) | 0.0108 (8) |
O2 | 0.0584 (11) | 0.0339 (8) | 0.0378 (8) | 0.0036 (7) | 0.0091 (7) | −0.0056 (7) |
O3 | 0.0428 (9) | 0.0310 (7) | 0.0274 (7) | −0.0021 (6) | 0.0039 (6) | −0.0008 (6) |
O4 | 0.0588 (12) | 0.0436 (10) | 0.0856 (13) | 0.0009 (9) | −0.0314 (10) | −0.0088 (9) |
O5 | 0.0569 (11) | 0.0414 (9) | 0.0399 (9) | 0.0002 (8) | 0.0008 (8) | 0.0018 (7) |
N1 | 0.0539 (13) | 0.0421 (11) | 0.0461 (11) | −0.0074 (9) | −0.0144 (10) | 0.0119 (9) |
N2 | 0.0637 (13) | 0.0339 (10) | 0.0296 (10) | 0.0060 (9) | 0.0065 (9) | −0.0010 (8) |
C1 | 0.0389 (13) | 0.0416 (12) | 0.0339 (11) | −0.0124 (10) | 0.0004 (10) | 0.0091 (9) |
C2 | 0.0453 (14) | 0.0405 (13) | 0.0385 (12) | −0.0095 (10) | −0.0040 (10) | 0.0082 (10) |
C3 | 0.0646 (18) | 0.0373 (13) | 0.0586 (15) | −0.0051 (12) | −0.0167 (13) | 0.0098 (11) |
C4 | 0.0361 (13) | 0.0486 (13) | 0.0352 (12) | −0.0058 (10) | 0.0004 (10) | 0.0042 (10) |
C5 | 0.0450 (14) | 0.0473 (13) | 0.0303 (11) | 0.0058 (11) | 0.0058 (10) | −0.0003 (10) |
C6 | 0.0509 (15) | 0.0341 (12) | 0.0369 (12) | 0.0000 (10) | −0.0062 (10) | 0.0018 (9) |
C7 | 0.0331 (12) | 0.0354 (12) | 0.0330 (11) | 0.0013 (9) | 0.0060 (9) | −0.0036 (9) |
C8 | 0.0512 (14) | 0.0330 (11) | 0.0315 (11) | −0.0073 (10) | 0.0103 (10) | 0.0013 (9) |
C9 | 0.116 (3) | 0.106 (2) | 0.0464 (15) | −0.076 (2) | 0.0316 (16) | −0.0180 (16) |
C10 | 0.098 (2) | 0.0728 (19) | 0.0525 (16) | 0.0421 (17) | 0.0205 (15) | 0.0233 (14) |
C11 | 0.0562 (15) | 0.0462 (13) | 0.0327 (12) | −0.0053 (11) | 0.0057 (10) | −0.0023 (10) |
C12 | 0.0438 (14) | 0.0384 (13) | 0.0420 (13) | −0.0050 (10) | 0.0009 (11) | 0.0055 (10) |
Geometric parameters (Å, º) top
O1—C3 | 1.333 (3) | C4—C6 | 1.555 (3) |
O1—N1 | 1.422 (2) | C4—H4 | 1.0000 |
O2—C7 | 1.225 (2) | C5—H5A | 0.9900 |
O3—C7 | 1.337 (2) | C5—H5B | 0.9900 |
O3—C8 | 1.475 (2) | C6—H6A | 0.9900 |
O4—C12 | 1.207 (3) | C6—H6B | 0.9900 |
O5—C12 | 1.322 (3) | C8—C9 | 1.503 (3) |
O5—H5O | 0.95 (3) | C8—C11 | 1.511 (3) |
N1—C1 | 1.309 (3) | C8—C10 | 1.512 (3) |
N2—C7 | 1.329 (3) | C9—H9A | 0.9800 |
N2—C6 | 1.464 (3) | C9—H9B | 0.9800 |
N2—C5 | 1.469 (3) | C9—H9C | 0.9800 |
C1—C2 | 1.423 (3) | C10—H10A | 0.9800 |
C1—C4 | 1.489 (3) | C10—H10B | 0.9800 |
C2—C3 | 1.348 (3) | C10—H10C | 0.9800 |
C2—C12 | 1.471 (3) | C11—H11A | 0.9800 |
C3—H3 | 0.9500 | C11—H11B | 0.9800 |
C4—C5 | 1.547 (3) | C11—H11C | 0.9800 |
| | | |
C3—O1—N1 | 108.31 (16) | C4—C6—H6B | 114.0 |
C7—O3—C8 | 121.90 (15) | H6A—C6—H6B | 111.2 |
C12—O5—H5O | 107.9 (16) | O2—C7—N2 | 124.10 (18) |
C1—N1—O1 | 105.04 (17) | O2—C7—O3 | 125.49 (18) |
C7—N2—C6 | 130.64 (17) | N2—C7—O3 | 110.40 (17) |
C7—N2—C5 | 129.16 (17) | O3—C8—C9 | 109.93 (18) |
C6—N2—C5 | 95.26 (16) | O3—C8—C11 | 102.83 (15) |
N1—C1—C2 | 111.91 (19) | C9—C8—C11 | 110.6 (2) |
N1—C1—C4 | 119.9 (2) | O3—C8—C10 | 108.56 (18) |
C2—C1—C4 | 128.13 (19) | C9—C8—C10 | 113.1 (2) |
C3—C2—C1 | 103.72 (19) | C11—C8—C10 | 111.25 (19) |
C3—C2—C12 | 128.9 (2) | C8—C9—H9A | 109.5 |
C1—C2—C12 | 127.41 (19) | C8—C9—H9B | 109.5 |
O1—C3—C2 | 111.0 (2) | H9A—C9—H9B | 109.5 |
O1—C3—H3 | 124.5 | C8—C9—H9C | 109.5 |
C2—C3—H3 | 124.5 | H9A—C9—H9C | 109.5 |
C1—C4—C5 | 116.78 (18) | H9B—C9—H9C | 109.5 |
C1—C4—C6 | 114.48 (19) | C8—C10—H10A | 109.5 |
C5—C4—C6 | 88.65 (15) | C8—C10—H10B | 109.5 |
C1—C4—H4 | 111.7 | H10A—C10—H10B | 109.5 |
C5—C4—H4 | 111.7 | C8—C10—H10C | 109.5 |
C6—C4—H4 | 111.7 | H10A—C10—H10C | 109.5 |
N2—C5—C4 | 88.08 (15) | H10B—C10—H10C | 109.5 |
N2—C5—H5A | 114.0 | C8—C11—H11A | 109.5 |
C4—C5—H5A | 114.0 | C8—C11—H11B | 109.5 |
N2—C5—H5B | 114.0 | H11A—C11—H11B | 109.5 |
C4—C5—H5B | 114.0 | C8—C11—H11C | 109.5 |
H5A—C5—H5B | 111.2 | H11A—C11—H11C | 109.5 |
N2—C6—C4 | 87.95 (15) | H11B—C11—H11C | 109.5 |
N2—C6—H6A | 114.0 | O4—C12—O5 | 123.8 (2) |
C4—C6—H6A | 114.0 | O4—C12—C2 | 122.9 (2) |
N2—C6—H6B | 114.0 | O5—C12—C2 | 113.36 (19) |
| | | |
C3—O1—N1—C1 | 0.4 (3) | C7—N2—C6—C4 | 157.9 (2) |
O1—N1—C1—C2 | −0.5 (3) | C5—N2—C6—C4 | 1.77 (18) |
O1—N1—C1—C4 | 178.69 (19) | C1—C4—C6—N2 | 117.31 (19) |
N1—C1—C2—C3 | 0.5 (3) | C5—C4—C6—N2 | −1.67 (17) |
C4—C1—C2—C3 | −178.7 (2) | C6—N2—C7—O2 | −164.8 (2) |
N1—C1—C2—C12 | 179.6 (2) | C5—N2—C7—O2 | −16.1 (4) |
C4—C1—C2—C12 | 0.5 (4) | C6—N2—C7—O3 | 16.0 (3) |
N1—O1—C3—C2 | −0.1 (3) | C5—N2—C7—O3 | 164.7 (2) |
C1—C2—C3—O1 | −0.2 (3) | C8—O3—C7—O2 | −11.7 (3) |
C12—C2—C3—O1 | −179.3 (2) | C8—O3—C7—N2 | 167.52 (18) |
N1—C1—C4—C5 | −15.3 (3) | C7—O3—C8—C9 | −50.9 (3) |
C2—C1—C4—C5 | 163.8 (2) | C7—O3—C8—C11 | −168.69 (18) |
N1—C1—C4—C6 | −116.9 (2) | C7—O3—C8—C10 | 73.4 (2) |
C2—C1—C4—C6 | 62.2 (3) | C3—C2—C12—O4 | 174.9 (3) |
C7—N2—C5—C4 | −158.5 (2) | C1—C2—C12—O4 | −4.0 (4) |
C6—N2—C5—C4 | −1.78 (18) | C3—C2—C12—O5 | −4.6 (4) |
C1—C4—C5—N2 | −115.2 (2) | C1—C2—C12—O5 | 176.4 (2) |
C6—C4—C5—N2 | 1.67 (17) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O5—H5O···O2i | 0.95 (3) | 1.70 (3) | 2.650 (2) | 175 (3) |
Symmetry code: (i) x, y+1, z. |
Crystal data top
C12H16N2O5 | F(000) = 568 |
Mr = 268.27 | Dx = 1.347 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
a = 14.3254 (10) Å | Cell parameters from 1931 reflections |
b = 8.7613 (7) Å | θ = 3.7–25.9° |
c = 11.4085 (8) Å | µ = 0.11 mm−1 |
β = 112.480 (8)° | T = 293 K |
V = 1323.07 (18) Å3 | Stick, colorless |
Z = 4 | 0.13 × 0.04 × 0.03 mm |
Data collection top
Xcalibur, Sapphire3 diffractometer | 2319 independent reflections |
Radiation source: Enhance (Mo) X-ray Source | 1858 reflections with I > 2σ(I) |
Detector resolution: 16.1827 pixels mm-1 | Rint = 0.080 |
ω scans | θmax = 25.0°, θmin = 3.0° |
Absorption correction: multi-scan CrysAlisPro 1.171.39.46 (Rigaku Oxford Diffraction, 2018)
Empirical absorption correction using spherical harmonics,
implemented in SCALE3 ABSPACK scaling algorithm. | h = −17→14 |
Tmin = 0.138, Tmax = 1.000 | k = −10→10 |
8684 measured reflections | l = −13→12 |
Refinement top
Refinement on F2 | 0 restraints |
Least-squares matrix: full | Hydrogen site location: mixed |
R[F2 > 2σ(F2)] = 0.059 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.175 | w = 1/[σ2(Fo2) + (0.0893P)2 + 0.1233P] where P = (Fo2 + 2Fc2)/3 |
S = 1.10 | (Δ/σ)max < 0.001 |
2319 reflections | Δρmax = 0.23 e Å−3 |
179 parameters | Δρmin = −0.21 e Å−3 |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 0.58603 (13) | 0.1651 (2) | 0.49364 (15) | 0.0548 (5) | |
O3 | 0.15089 (15) | 0.4655 (2) | 0.28431 (17) | 0.0613 (6) | |
O2 | 0.17671 (13) | 0.5037 (2) | 0.10179 (17) | 0.0604 (6) | |
O4 | 0.42575 (12) | 0.0185 (2) | 0.08450 (14) | 0.0494 (5) | |
O5 | 0.59410 (12) | 0.0321 (2) | 0.15129 (16) | 0.0546 (5) | |
H5O | 0.583 (3) | 0.004 (6) | 0.067 (5) | 0.132 (16)* | |
N1 | 0.47972 (15) | 0.1700 (3) | 0.45717 (18) | 0.0505 (6) | |
N2 | 0.21608 (15) | 0.2805 (3) | 0.20963 (18) | 0.0497 (6) | |
C1 | 0.44202 (16) | 0.1259 (3) | 0.3393 (2) | 0.0408 (6) | |
C2 | 0.51935 (17) | 0.0938 (3) | 0.2937 (2) | 0.0418 (6) | |
C3 | 0.60665 (19) | 0.1204 (3) | 0.3950 (2) | 0.0481 (6) | |
H3 | 0.671241 | 0.108916 | 0.395143 | 0.058* | |
C4 | 0.33062 (17) | 0.1138 (3) | 0.2701 (2) | 0.0457 (6) | |
H4 | 0.309389 | 0.007350 | 0.250555 | 0.055* | |
C5 | 0.26412 (18) | 0.1983 (3) | 0.3291 (2) | 0.0493 (6) | |
H5A | 0.218550 | 0.131943 | 0.350088 | 0.059* | |
H5B | 0.301980 | 0.263352 | 0.400262 | 0.059* | |
C6 | 0.28316 (18) | 0.2174 (3) | 0.1519 (2) | 0.0490 (6) | |
H6A | 0.329775 | 0.291338 | 0.141387 | 0.059* | |
H6B | 0.248183 | 0.161794 | 0.073857 | 0.059* | |
C7 | 0.18101 (17) | 0.4258 (3) | 0.1912 (2) | 0.0475 (6) | |
C8 | 0.1041 (2) | 0.6151 (3) | 0.2851 (3) | 0.0648 (8) | |
C9 | 0.1772 (3) | 0.7421 (5) | 0.2865 (5) | 0.1055 (14) | |
H9A | 0.240525 | 0.726552 | 0.356099 | 0.158* | |
H9B | 0.149405 | 0.838871 | 0.296086 | 0.158* | |
H9C | 0.187626 | 0.741054 | 0.208263 | 0.158* | |
C10 | 0.0072 (2) | 0.6298 (5) | 0.1700 (4) | 0.0887 (11) | |
H10A | 0.021749 | 0.625379 | 0.094620 | 0.133* | |
H10B | −0.024331 | 0.725669 | 0.172955 | 0.133* | |
H10C | −0.037547 | 0.547885 | 0.169143 | 0.133* | |
C11 | 0.0829 (5) | 0.6075 (6) | 0.4037 (4) | 0.138 (2) | |
H11A | 0.038906 | 0.522938 | 0.398474 | 0.208* | |
H11B | 0.051109 | 0.700545 | 0.413167 | 0.208* | |
H11C | 0.145207 | 0.594210 | 0.475480 | 0.208* | |
C12 | 0.50979 (17) | 0.0449 (3) | 0.1675 (2) | 0.0423 (6) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.0518 (10) | 0.0595 (13) | 0.0495 (9) | 0.0018 (8) | 0.0156 (7) | −0.0084 (8) |
O3 | 0.0734 (12) | 0.0526 (13) | 0.0672 (11) | 0.0152 (9) | 0.0372 (9) | −0.0005 (9) |
O2 | 0.0519 (11) | 0.0652 (14) | 0.0633 (11) | 0.0056 (9) | 0.0212 (8) | 0.0129 (10) |
O4 | 0.0439 (9) | 0.0581 (12) | 0.0490 (9) | −0.0008 (8) | 0.0210 (7) | −0.0085 (8) |
O5 | 0.0444 (10) | 0.0752 (14) | 0.0497 (10) | 0.0057 (8) | 0.0241 (7) | −0.0034 (8) |
N1 | 0.0514 (12) | 0.0524 (14) | 0.0492 (12) | 0.0042 (10) | 0.0210 (9) | −0.0034 (9) |
N2 | 0.0499 (12) | 0.0534 (14) | 0.0505 (11) | 0.0066 (10) | 0.0244 (9) | 0.0006 (9) |
C1 | 0.0476 (13) | 0.0336 (13) | 0.0445 (12) | 0.0022 (9) | 0.0213 (10) | 0.0029 (9) |
C2 | 0.0455 (12) | 0.0385 (14) | 0.0439 (12) | 0.0029 (10) | 0.0199 (9) | 0.0008 (10) |
C3 | 0.0478 (13) | 0.0503 (16) | 0.0504 (13) | 0.0005 (11) | 0.0236 (11) | −0.0035 (11) |
C4 | 0.0484 (13) | 0.0422 (14) | 0.0529 (13) | −0.0020 (10) | 0.0265 (10) | −0.0027 (11) |
C5 | 0.0478 (13) | 0.0526 (16) | 0.0568 (14) | 0.0032 (11) | 0.0305 (11) | 0.0046 (12) |
C6 | 0.0443 (13) | 0.0605 (18) | 0.0451 (13) | 0.0038 (11) | 0.0200 (10) | −0.0041 (11) |
C7 | 0.0370 (12) | 0.0558 (17) | 0.0492 (13) | 0.0011 (11) | 0.0159 (10) | −0.0018 (12) |
C8 | 0.0613 (17) | 0.0492 (18) | 0.0863 (19) | 0.0073 (13) | 0.0310 (14) | −0.0119 (15) |
C9 | 0.064 (2) | 0.067 (3) | 0.169 (4) | −0.0049 (17) | 0.026 (2) | −0.035 (2) |
C10 | 0.0488 (17) | 0.077 (3) | 0.134 (3) | 0.0099 (15) | 0.0283 (17) | −0.006 (2) |
C11 | 0.218 (6) | 0.116 (4) | 0.123 (3) | 0.073 (4) | 0.113 (4) | 0.006 (3) |
C12 | 0.0438 (13) | 0.0396 (14) | 0.0467 (12) | 0.0038 (10) | 0.0210 (10) | 0.0005 (10) |
Geometric parameters (Å, º) top
O1—C3 | 1.327 (3) | C4—C6 | 1.550 (3) |
O1—N1 | 1.418 (3) | C4—H4 | 0.9800 |
O3—C7 | 1.336 (3) | C5—H5A | 0.9700 |
O3—C8 | 1.473 (3) | C5—H5B | 0.9700 |
O2—C7 | 1.209 (3) | C6—H6A | 0.9700 |
O4—C12 | 1.236 (3) | C6—H6B | 0.9700 |
O5—C12 | 1.295 (3) | C8—C11 | 1.497 (5) |
O5—H5O | 0.94 (5) | C8—C10 | 1.508 (5) |
N1—C1 | 1.302 (3) | C8—C9 | 1.524 (5) |
N2—C7 | 1.355 (4) | C9—H9A | 0.9600 |
N2—C5 | 1.461 (3) | C9—H9B | 0.9600 |
N2—C6 | 1.465 (3) | C9—H9C | 0.9600 |
C1—C2 | 1.421 (3) | C10—H10A | 0.9600 |
C1—C4 | 1.489 (3) | C10—H10B | 0.9600 |
C2—C3 | 1.360 (3) | C10—H10C | 0.9600 |
C2—C12 | 1.457 (3) | C11—H11A | 0.9600 |
C3—H3 | 0.9300 | C11—H11B | 0.9600 |
C4—C5 | 1.549 (3) | C11—H11C | 0.9600 |
| | | |
C3—O1—N1 | 108.82 (17) | C4—C6—H6B | 113.9 |
C7—O3—C8 | 121.5 (2) | H6A—C6—H6B | 111.1 |
C12—O5—H5O | 111 (3) | O2—C7—O3 | 126.6 (3) |
C1—N1—O1 | 105.59 (18) | O2—C7—N2 | 123.8 (2) |
C7—N2—C5 | 128.5 (2) | O3—C7—N2 | 109.5 (2) |
C7—N2—C6 | 123.6 (2) | O3—C8—C11 | 102.5 (3) |
C5—N2—C6 | 94.44 (18) | O3—C8—C10 | 109.9 (2) |
N1—C1—C2 | 111.33 (19) | C11—C8—C10 | 110.7 (3) |
N1—C1—C4 | 120.4 (2) | O3—C8—C9 | 109.7 (2) |
C2—C1—C4 | 128.28 (19) | C11—C8—C9 | 113.5 (3) |
C3—C2—C1 | 104.31 (19) | C10—C8—C9 | 110.3 (3) |
C3—C2—C12 | 126.8 (2) | C8—C9—H9A | 109.5 |
C1—C2—C12 | 128.9 (2) | C8—C9—H9B | 109.5 |
O1—C3—C2 | 109.9 (2) | H9A—C9—H9B | 109.5 |
O1—C3—H3 | 125.0 | C8—C9—H9C | 109.5 |
C2—C3—H3 | 125.0 | H9A—C9—H9C | 109.5 |
C1—C4—C5 | 116.6 (2) | H9B—C9—H9C | 109.5 |
C1—C4—C6 | 116.4 (2) | C8—C10—H10A | 109.5 |
C5—C4—C6 | 87.71 (18) | C8—C10—H10B | 109.5 |
C1—C4—H4 | 111.4 | H10A—C10—H10B | 109.5 |
C5—C4—H4 | 111.4 | C8—C10—H10C | 109.5 |
C6—C4—H4 | 111.4 | H10A—C10—H10C | 109.5 |
N2—C5—C4 | 88.77 (17) | H10B—C10—H10C | 109.5 |
N2—C5—H5A | 113.9 | C8—C11—H11A | 109.5 |
C4—C5—H5A | 113.9 | C8—C11—H11B | 109.5 |
N2—C5—H5B | 113.9 | H11A—C11—H11B | 109.5 |
C4—C5—H5B | 113.9 | C8—C11—H11C | 109.5 |
H5A—C5—H5B | 111.1 | H11A—C11—H11C | 109.5 |
N2—C6—C4 | 88.57 (16) | H11B—C11—H11C | 109.5 |
N2—C6—H6A | 113.9 | O4—C12—O5 | 124.2 (2) |
C4—C6—H6A | 113.9 | O4—C12—C2 | 120.5 (2) |
N2—C6—H6B | 113.9 | O5—C12—C2 | 115.2 (2) |
| | | |
C3—O1—N1—C1 | 0.9 (3) | C7—N2—C6—C4 | 148.7 (2) |
O1—N1—C1—C2 | −1.1 (3) | C5—N2—C6—C4 | 5.55 (19) |
O1—N1—C1—C4 | 178.6 (2) | C1—C4—C6—N2 | −123.9 (2) |
N1—C1—C2—C3 | 0.8 (3) | C5—C4—C6—N2 | −5.22 (18) |
C4—C1—C2—C3 | −178.8 (2) | C8—O3—C7—O2 | 1.9 (4) |
N1—C1—C2—C12 | −178.5 (2) | C8—O3—C7—N2 | −176.7 (2) |
C4—C1—C2—C12 | 1.8 (4) | C5—N2—C7—O2 | 151.8 (2) |
N1—O1—C3—C2 | −0.4 (3) | C6—N2—C7—O2 | 21.6 (4) |
C1—C2—C3—O1 | −0.2 (3) | C5—N2—C7—O3 | −29.6 (3) |
C12—C2—C3—O1 | 179.2 (2) | C6—N2—C7—O3 | −159.8 (2) |
N1—C1—C4—C5 | 17.2 (4) | C7—O3—C8—C11 | 179.6 (3) |
C2—C1—C4—C5 | −163.2 (2) | C7—O3—C8—C10 | 61.9 (3) |
N1—C1—C4—C6 | 118.7 (2) | C7—O3—C8—C9 | −59.6 (4) |
C2—C1—C4—C6 | −61.7 (3) | C3—C2—C12—O4 | 177.0 (2) |
C7—N2—C5—C4 | −145.9 (2) | C1—C2—C12—O4 | −3.7 (4) |
C6—N2—C5—C4 | −5.6 (2) | C3—C2—C12—O5 | −2.9 (4) |
C1—C4—C5—N2 | 123.7 (2) | C1—C2—C12—O5 | 176.4 (2) |
C6—C4—C5—N2 | 5.23 (18) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O5—H5O···O4i | 0.94 (5) | 1.70 (5) | 2.632 (2) | 170 (5) |
Symmetry code: (i) −x+1, −y, −z. |