In this study, we introduce a novel indole-containing pyridine-based Schiff base, (E)-2-({[bis(pyridin-2-yl)methylidene]hydrazin-1-ylidene}methyl)-1H-indole, C20H15N5 (2-DPHI), and its cadmium(II) complex poly[[2-({[bis(pyridin-2-yl)methylidene]hydrazin-1-ylidene}methyl)-1H-indole]di-μ-chlorido-cadmium(II)], [CdCl2(C20H15N5)]n (pCd2), as potential anticancer agents. The Schiff base was synthesized by reacting dipyridylmethanone hydrazone with indole-2-formaldehyde, while the cadmium complex was prepared by combining CdCl2 and 2-DPHI in methanol at room temperature. Both compounds were evaluated for their cytotoxicity against three human cancer cell lines (A375, A549 and HeLa) and a normal cell line (HFF-1). The ligand 2-DPHI exhibited notable antitumour activity, with an IC50 value of 12.22 µM against A375 and 15.17 µM against A549 after 48 h, while the pCd2 complex showed an even stronger inhibition of A375 cells, with an IC50 value of 4.88 µM, outperforming both 2-DPHI and CdCl2. Both compounds demonstrated lower toxicity towards normal cells compared to cancer cells. The structures of 2-DPHI and pCd2 were fully characterized using single-crystal X-ray diffraction, elemental analysis, high-resolution mass spectrometry and FT–IR, 1H NMR, 13C NMR and UV–Vis spectroscopy.
Supporting information
CCDC references: 2392155; 2392154
(
E)-2-({[Bis(pyridin-2-yl)methylidene]hydrazin-1-ylidene}methyl)-1
H-indole (2-DPHI)
top
Crystal data top
C20H15N5 | Dx = 1.296 Mg m−3 |
Mr = 325.37 | Melting point: 454(2) K |
Orthorhombic, Pbc21 | Mo Kα radiation, λ = 0.71073 Å |
a = 4.8448 (2) Å | Cell parameters from 380 reflections |
b = 25.9645 (12) Å | θ = 2.5–26.0° |
c = 26.5071 (11) Å | µ = 0.08 mm−1 |
V = 3334.4 (2) Å3 | T = 293 K |
Z = 8 | Block, yellow |
F(000) = 1360 | 0.35 × 0.26 × 0.18 mm |
Data collection top
Bruker SMART CCD area detector diffractometer | 4373 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.070 |
phi and ω scans | θmax = 26.4°, θmin = 3.2° |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | h = −6→5 |
Tmin = 0.975, Tmax = 0.986 | k = −32→32 |
37250 measured reflections | l = −33→33 |
6783 independent reflections | |
Refinement top
Refinement on F2 | Hydrogen site location: mixed |
Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
R[F2 > 2σ(F2)] = 0.056 | w = 1/[σ2(Fo2) + (0.0686P)2] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.148 | (Δ/σ)max < 0.001 |
S = 0.99 | Δρmax = 0.22 e Å−3 |
6783 reflections | Δρmin = −0.19 e Å−3 |
459 parameters | Absolute structure: Flack x determined using 1587 quotients [(I+)-(I-)]/[(I+)+(I-)]
(Parsons et al., 2013) |
1 restraint | Absolute structure parameter: −0.6 (10) |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
C1 | 0.5103 (10) | 0.36082 (19) | 0.52405 (18) | 0.0451 (11) | |
C1A | 0.9955 (9) | 0.57995 (19) | 0.65181 (17) | 0.0429 (11) | |
C2 | 0.4897 (10) | 0.4028 (2) | 0.55471 (18) | 0.0495 (12) | |
H2 | 0.5924 | 0.4087 | 0.5838 | 0.059* | |
C2A | 1.0194 (10) | 0.6196 (2) | 0.61838 (18) | 0.0494 (12) | |
H2A | 0.9205 | 0.6235 | 0.5885 | 0.059* | |
C3 | 0.2850 (9) | 0.43608 (18) | 0.53464 (17) | 0.0440 (11) | |
C3A | 1.2233 (10) | 0.65398 (18) | 0.63737 (18) | 0.0460 (12) | |
C4 | 0.1763 (11) | 0.4840 (2) | 0.5481 (2) | 0.0561 (14) | |
H4 | 0.2374 | 0.5007 | 0.5771 | 0.067* | |
C4A | 1.3292 (11) | 0.7015 (2) | 0.6214 (2) | 0.0620 (15) | |
H4A | 1.2672 | 0.7166 | 0.5917 | 0.074* | |
C5 | −0.0221 (11) | 0.5061 (2) | 0.5181 (2) | 0.0602 (14) | |
H5 | −0.0905 | 0.5385 | 0.5263 | 0.072* | |
C5A | 1.5251 (12) | 0.7253 (2) | 0.6503 (2) | 0.0708 (17) | |
H5A | 1.5932 | 0.7573 | 0.6406 | 0.085* | |
C6 | −0.1222 (11) | 0.4809 (2) | 0.4757 (2) | 0.0543 (14) | |
H6 | −0.2599 | 0.4965 | 0.4566 | 0.065* | |
C6A | 1.6247 (13) | 0.7015 (3) | 0.6946 (2) | 0.0691 (18) | |
H6A | 1.7633 | 0.7177 | 0.7130 | 0.083* | |
C7 | −0.0228 (10) | 0.4334 (2) | 0.46122 (18) | 0.0516 (13) | |
H7 | −0.0905 | 0.4165 | 0.4328 | 0.062* | |
C7A | 1.5234 (11) | 0.6558 (2) | 0.71100 (19) | 0.0535 (13) | |
H7A | 1.5884 | 0.6409 | 0.7406 | 0.064* | |
C8 | 0.1826 (9) | 0.41189 (19) | 0.49086 (18) | 0.0415 (12) | |
C8A | 1.3211 (9) | 0.63213 (18) | 0.68261 (17) | 0.0409 (11) | |
C9 | 0.7005 (11) | 0.3183 (2) | 0.5251 (2) | 0.0489 (12) | |
C9A | 0.8070 (10) | 0.53721 (19) | 0.65111 (18) | 0.0465 (12) | |
H9A | 0.6958 | 0.5318 | 0.6230 | 0.056* | |
C10 | 1.0073 (9) | 0.23255 (17) | 0.45278 (17) | 0.0426 (11) | |
C10A | 0.4881 (9) | 0.45259 (18) | 0.72424 (17) | 0.0444 (11) | |
C11 | 0.9581 (9) | 0.25950 (18) | 0.40385 (18) | 0.0413 (11) | |
C11A | 0.5331 (9) | 0.48062 (19) | 0.77260 (17) | 0.0434 (12) | |
C12 | 0.7753 (10) | 0.2420 (2) | 0.3685 (2) | 0.0610 (15) | |
H12 | 0.6751 | 0.2120 | 0.3740 | 0.073* | |
C12A | 0.7167 (10) | 0.4636 (2) | 0.8087 (2) | 0.0616 (14) | |
H12A | 0.8193 | 0.4338 | 0.8036 | 0.074* | |
C13 | 0.7421 (12) | 0.2697 (3) | 0.3243 (2) | 0.0663 (17) | |
H13 | 0.6122 | 0.2595 | 0.3005 | 0.080* | |
C13A | 0.7450 (12) | 0.4919 (3) | 0.8529 (2) | 0.0686 (17) | |
H13A | 0.8690 | 0.4818 | 0.8778 | 0.082* | |
C14 | 0.9037 (13) | 0.3125 (3) | 0.3161 (2) | 0.0675 (17) | |
H14 | 0.8924 | 0.3310 | 0.2861 | 0.081* | |
C14A | 0.5887 (14) | 0.5346 (3) | 0.8590 (2) | 0.0678 (16) | |
H14A | 0.5999 | 0.5538 | 0.8886 | 0.081* | |
C15 | 1.0805 (13) | 0.3268 (2) | 0.3534 (2) | 0.0658 (15) | |
H15 | 1.1874 | 0.3560 | 0.3481 | 0.079* | |
C15A | 0.4149 (13) | 0.5490 (2) | 0.8213 (2) | 0.0668 (15) | |
H15A | 0.3082 | 0.5784 | 0.8259 | 0.080* | |
C16 | 1.1919 (10) | 0.18714 (17) | 0.4538 (2) | 0.0462 (11) | |
C16A | 0.3026 (10) | 0.40739 (18) | 0.72329 (19) | 0.0471 (12) | |
C17 | 1.3224 (11) | 0.1720 (2) | 0.4978 (2) | 0.0557 (14) | |
H17 | 1.2968 | 0.1900 | 0.5278 | 0.067* | |
C17A | 0.1734 (13) | 0.3910 (2) | 0.6802 (2) | 0.0611 (15) | |
C18 | 1.4930 (12) | 0.1290 (2) | 0.4958 (3) | 0.0679 (16) | |
H18 | 1.5848 | 0.1177 | 0.5246 | 0.081* | |
C18A | 0.0027 (12) | 0.3484 (2) | 0.6817 (3) | 0.0721 (17) | |
H18A | −0.0881 | 0.3371 | 0.6528 | 0.087* | |
C19 | 1.5240 (12) | 0.1036 (2) | 0.4508 (3) | 0.0683 (16) | |
H19 | 1.6381 | 0.0749 | 0.4486 | 0.082* | |
C19A | −0.0289 (12) | 0.3233 (2) | 0.7267 (3) | 0.0722 (17) | |
H19A | −0.1404 | 0.2943 | 0.7292 | 0.087* | |
C20 | 1.3857 (13) | 0.1208 (2) | 0.4095 (3) | 0.0715 (17) | |
H20 | 1.4049 | 0.1025 | 0.3796 | 0.086* | |
C20A | 0.1083 (13) | 0.3422 (2) | 0.7680 (3) | 0.0733 (17) | |
H20A | 0.0870 | 0.3249 | 0.7985 | 0.088* | |
N1 | 0.3240 (7) | 0.36618 (15) | 0.48493 (15) | 0.0448 (9) | |
H1 | 0.3000 | 0.3445 | 0.4608 | 0.054* | |
N1A | 1.1799 (8) | 0.58679 (16) | 0.69029 (15) | 0.0454 (10) | |
H1A | 1.2038 | 0.5661 | 0.7153 | 0.055* | |
N2 | 0.7073 (8) | 0.28769 (17) | 0.48846 (16) | 0.0502 (11) | |
N2A | 0.7909 (8) | 0.50676 (16) | 0.68852 (15) | 0.0502 (10) | |
N3 | 0.8999 (9) | 0.24691 (16) | 0.49465 (15) | 0.0507 (10) | |
N3A | 0.6034 (9) | 0.46654 (16) | 0.68247 (16) | 0.0536 (11) | |
N4 | 1.1120 (9) | 0.30182 (15) | 0.39720 (15) | 0.0501 (10) | |
N4A | 0.3891 (10) | 0.52358 (17) | 0.77842 (16) | 0.0534 (11) | |
N5 | 1.2222 (9) | 0.16288 (16) | 0.40940 (18) | 0.0609 (12) | |
N5A | 0.2705 (9) | 0.38381 (17) | 0.76738 (18) | 0.0627 (12) | |
H9 | 0.820 (8) | 0.3177 (17) | 0.5508 (17) | 0.040 (12)* | |
H17A | 0.194 (10) | 0.408 (2) | 0.653 (2) | 0.059 (16)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.053 (3) | 0.048 (3) | 0.034 (2) | 0.002 (2) | 0.007 (2) | 0.000 (2) |
C1A | 0.046 (3) | 0.046 (3) | 0.036 (2) | 0.001 (2) | −0.001 (2) | 0.002 (2) |
C2 | 0.054 (3) | 0.059 (3) | 0.036 (2) | 0.003 (3) | 0.003 (2) | −0.011 (2) |
C2A | 0.060 (3) | 0.052 (3) | 0.036 (3) | −0.004 (3) | −0.004 (2) | 0.005 (2) |
C3 | 0.049 (3) | 0.044 (3) | 0.039 (3) | −0.003 (2) | 0.012 (2) | −0.007 (2) |
C3A | 0.056 (3) | 0.038 (3) | 0.044 (3) | 0.003 (2) | 0.008 (2) | 0.001 (2) |
C4 | 0.058 (3) | 0.050 (3) | 0.060 (3) | −0.001 (3) | 0.010 (3) | −0.015 (3) |
C4A | 0.076 (4) | 0.050 (3) | 0.060 (3) | −0.004 (3) | 0.008 (3) | 0.014 (3) |
C5 | 0.061 (3) | 0.051 (3) | 0.069 (3) | 0.011 (3) | 0.015 (3) | −0.001 (3) |
C5A | 0.084 (4) | 0.048 (3) | 0.081 (4) | −0.017 (3) | 0.015 (4) | −0.001 (3) |
C6 | 0.058 (3) | 0.053 (3) | 0.052 (3) | 0.011 (3) | 0.006 (3) | 0.011 (3) |
C6A | 0.075 (4) | 0.067 (4) | 0.064 (4) | −0.019 (3) | 0.003 (3) | −0.010 (3) |
C7 | 0.055 (3) | 0.060 (3) | 0.039 (3) | −0.003 (3) | 0.007 (2) | 0.000 (3) |
C7A | 0.059 (3) | 0.057 (3) | 0.045 (3) | −0.003 (3) | 0.000 (2) | −0.007 (3) |
C8 | 0.046 (3) | 0.041 (3) | 0.037 (3) | −0.003 (2) | 0.013 (2) | −0.003 (2) |
C8A | 0.043 (3) | 0.042 (3) | 0.038 (2) | 0.001 (2) | 0.005 (2) | −0.005 (2) |
C9 | 0.059 (3) | 0.049 (3) | 0.038 (3) | 0.006 (3) | 0.007 (3) | 0.006 (3) |
C9A | 0.057 (3) | 0.049 (3) | 0.033 (3) | −0.009 (2) | 0.005 (2) | −0.002 (2) |
C10 | 0.056 (3) | 0.034 (3) | 0.038 (2) | 0.000 (2) | 0.009 (2) | −0.002 (2) |
C10A | 0.056 (3) | 0.035 (3) | 0.043 (3) | −0.004 (2) | 0.009 (2) | −0.001 (2) |
C11 | 0.052 (3) | 0.034 (3) | 0.038 (3) | 0.013 (2) | 0.004 (2) | −0.005 (2) |
C11A | 0.053 (3) | 0.039 (3) | 0.038 (3) | −0.007 (2) | 0.008 (2) | 0.007 (2) |
C12 | 0.061 (3) | 0.056 (4) | 0.065 (4) | −0.012 (3) | 0.004 (3) | −0.015 (3) |
C12A | 0.063 (3) | 0.060 (4) | 0.062 (4) | 0.005 (3) | −0.002 (3) | 0.007 (3) |
C13 | 0.069 (4) | 0.086 (5) | 0.044 (3) | 0.015 (3) | −0.012 (3) | −0.013 (3) |
C13A | 0.072 (4) | 0.087 (5) | 0.047 (3) | −0.012 (4) | −0.015 (3) | 0.010 (3) |
C14 | 0.085 (4) | 0.076 (4) | 0.042 (3) | 0.029 (4) | −0.001 (3) | 0.004 (3) |
C14A | 0.090 (4) | 0.063 (4) | 0.050 (3) | −0.019 (4) | −0.003 (3) | −0.007 (3) |
C15 | 0.094 (4) | 0.045 (3) | 0.059 (4) | −0.002 (3) | −0.004 (3) | 0.013 (3) |
C15A | 0.093 (4) | 0.058 (4) | 0.050 (3) | 0.005 (3) | −0.001 (3) | −0.009 (3) |
C16 | 0.056 (3) | 0.033 (3) | 0.050 (3) | 0.002 (2) | 0.011 (3) | 0.004 (2) |
C16A | 0.055 (3) | 0.036 (3) | 0.050 (3) | 0.001 (2) | 0.015 (2) | −0.005 (2) |
C17 | 0.066 (3) | 0.042 (3) | 0.059 (3) | 0.003 (3) | 0.000 (3) | 0.006 (3) |
C17A | 0.078 (4) | 0.053 (4) | 0.052 (4) | −0.012 (3) | 0.004 (3) | 0.000 (3) |
C18 | 0.077 (4) | 0.049 (4) | 0.078 (4) | 0.009 (3) | −0.001 (3) | 0.010 (3) |
C18A | 0.079 (4) | 0.065 (4) | 0.073 (4) | −0.022 (3) | 0.003 (3) | −0.011 (4) |
C19 | 0.074 (4) | 0.041 (3) | 0.090 (4) | 0.016 (3) | 0.013 (4) | 0.008 (3) |
C19A | 0.079 (4) | 0.046 (3) | 0.092 (5) | −0.020 (3) | 0.006 (4) | −0.003 (4) |
C20 | 0.090 (4) | 0.053 (4) | 0.071 (4) | 0.017 (3) | 0.011 (4) | −0.007 (3) |
C20A | 0.105 (5) | 0.046 (3) | 0.068 (4) | −0.021 (3) | 0.021 (4) | 0.006 (3) |
N1 | 0.054 (2) | 0.043 (2) | 0.038 (2) | 0.0003 (19) | 0.003 (2) | −0.0100 (18) |
N1A | 0.052 (2) | 0.050 (2) | 0.034 (2) | −0.003 (2) | 0.0019 (19) | 0.0041 (19) |
N2 | 0.064 (3) | 0.047 (3) | 0.039 (2) | 0.007 (2) | 0.010 (2) | −0.005 (2) |
N2A | 0.056 (2) | 0.053 (3) | 0.041 (2) | −0.014 (2) | 0.0078 (19) | 0.001 (2) |
N3 | 0.065 (3) | 0.039 (2) | 0.047 (2) | 0.011 (2) | 0.007 (2) | 0.003 (2) |
N3A | 0.064 (3) | 0.051 (3) | 0.046 (2) | −0.016 (2) | 0.013 (2) | −0.002 (2) |
N4 | 0.065 (3) | 0.038 (2) | 0.048 (2) | −0.004 (2) | −0.004 (2) | 0.005 (2) |
N4A | 0.075 (3) | 0.042 (3) | 0.043 (3) | 0.003 (2) | −0.007 (2) | −0.001 (2) |
N5 | 0.082 (3) | 0.044 (3) | 0.057 (3) | 0.018 (2) | 0.011 (2) | −0.003 (2) |
N5A | 0.086 (3) | 0.045 (3) | 0.057 (3) | −0.013 (2) | 0.012 (3) | 0.005 (2) |
Geometric parameters (Å, º) top
C1—C2 | 1.364 (6) | C11—C12 | 1.367 (7) |
C1—N1 | 1.382 (6) | C11A—N4A | 1.325 (6) |
C1—C9 | 1.437 (7) | C11A—C12A | 1.379 (7) |
C1A—C2A | 1.363 (7) | C12—C13 | 1.383 (8) |
C1A—N1A | 1.368 (6) | C12—H12 | 0.9300 |
C1A—C9A | 1.437 (7) | C12A—C13A | 1.391 (8) |
C2—C3 | 1.419 (7) | C12A—H12A | 0.9300 |
C2—H2 | 0.9300 | C13—C14 | 1.377 (8) |
C2A—C3A | 1.424 (7) | C13—H13 | 0.9300 |
C2A—H2A | 0.9300 | C13A—C14A | 1.351 (8) |
C3—C4 | 1.397 (7) | C13A—H13A | 0.9300 |
C3—C8 | 1.410 (7) | C14—C15 | 1.360 (8) |
C3A—C4A | 1.401 (7) | C14—H14 | 0.9300 |
C3A—C8A | 1.409 (6) | C14A—C15A | 1.360 (8) |
C4—C5 | 1.374 (8) | C14A—H14A | 0.9300 |
C4—H4 | 0.9300 | C15—N4 | 1.338 (7) |
C4A—C5A | 1.366 (8) | C15—H15 | 0.9300 |
C4A—H4A | 0.9300 | C15A—N4A | 1.320 (7) |
C5—C6 | 1.387 (8) | C15A—H15A | 0.9300 |
C5—H5 | 0.9300 | C16—N5 | 1.343 (7) |
C5A—C6A | 1.413 (8) | C16—C17 | 1.385 (7) |
C5A—H5A | 0.9300 | C16A—N5A | 1.329 (6) |
C6—C7 | 1.379 (7) | C16A—C17A | 1.370 (7) |
C6—H6 | 0.9300 | C17—C18 | 1.389 (7) |
C6A—C7A | 1.355 (8) | C17—H17 | 0.9300 |
C6A—H6A | 0.9300 | C17A—C18A | 1.382 (8) |
C7—C8 | 1.385 (7) | C17A—H17A | 0.85 (5) |
C7—H7 | 0.9300 | C18—C19 | 1.372 (8) |
C7A—C8A | 1.381 (7) | C18—H18 | 0.9300 |
C7A—H7A | 0.9300 | C18A—C19A | 1.367 (9) |
C8—N1 | 1.380 (6) | C18A—H18A | 0.9300 |
C8A—N1A | 1.377 (6) | C19—C20 | 1.359 (9) |
C9—N2 | 1.256 (6) | C19—H19 | 0.9300 |
C9—H9 | 0.89 (4) | C19A—C20A | 1.372 (9) |
C9A—N2A | 1.271 (6) | C19A—H19A | 0.9300 |
C9A—H9A | 0.9300 | C20—N5 | 1.349 (7) |
C10—N3 | 1.281 (6) | C20—H20 | 0.9300 |
C10—C16 | 1.480 (6) | C20A—N5A | 1.336 (7) |
C10—C11 | 1.493 (6) | C20A—H20A | 0.9300 |
C10A—N3A | 1.292 (6) | N1—H1 | 0.8600 |
C10A—C16A | 1.478 (6) | N1A—H1A | 0.8600 |
C10A—C11A | 1.490 (7) | N2—N3 | 1.421 (6) |
C11—N4 | 1.340 (6) | N2A—N3A | 1.393 (5) |
| | | |
C2—C1—N1 | 108.6 (4) | C11—C12—H12 | 120.6 |
C2—C1—C9 | 130.5 (5) | C13—C12—H12 | 120.6 |
N1—C1—C9 | 120.7 (4) | C11A—C12A—C13A | 118.6 (5) |
C2A—C1A—N1A | 109.4 (4) | C11A—C12A—H12A | 120.7 |
C2A—C1A—C9A | 128.9 (4) | C13A—C12A—H12A | 120.7 |
N1A—C1A—C9A | 121.7 (4) | C14—C13—C12 | 119.2 (5) |
C1—C2—C3 | 108.3 (4) | C14—C13—H13 | 120.4 |
C1—C2—H2 | 125.8 | C12—C13—H13 | 120.4 |
C3—C2—H2 | 125.8 | C14A—C13A—C12A | 118.7 (5) |
C1A—C2A—C3A | 107.6 (4) | C14A—C13A—H13A | 120.7 |
C1A—C2A—H2A | 126.2 | C12A—C13A—H13A | 120.7 |
C3A—C2A—H2A | 126.2 | C15—C14—C13 | 117.5 (5) |
C4—C3—C8 | 118.3 (5) | C15—C14—H14 | 121.2 |
C4—C3—C2 | 135.2 (5) | C13—C14—H14 | 121.2 |
C8—C3—C2 | 106.5 (4) | C13A—C14A—C15A | 118.9 (6) |
C4A—C3A—C8A | 119.2 (5) | C13A—C14A—H14A | 120.5 |
C4A—C3A—C2A | 134.4 (5) | C15A—C14A—H14A | 120.5 |
C8A—C3A—C2A | 106.4 (4) | N4—C15—C14 | 124.8 (6) |
C5—C4—C3 | 119.2 (5) | N4—C15—H15 | 117.6 |
C5—C4—H4 | 120.4 | C14—C15—H15 | 117.6 |
C3—C4—H4 | 120.4 | N4A—C15A—C14A | 123.6 (6) |
C5A—C4A—C3A | 118.9 (5) | N4A—C15A—H15A | 118.2 |
C5A—C4A—H4A | 120.6 | C14A—C15A—H15A | 118.2 |
C3A—C4A—H4A | 120.6 | N5—C16—C17 | 123.8 (4) |
C4—C5—C6 | 121.2 (5) | N5—C16—C10 | 115.1 (4) |
C4—C5—H5 | 119.4 | C17—C16—C10 | 121.2 (5) |
C6—C5—H5 | 119.4 | N5A—C16A—C17A | 122.5 (5) |
C4A—C5A—C6A | 120.4 (5) | N5A—C16A—C10A | 115.0 (5) |
C4A—C5A—H5A | 119.8 | C17A—C16A—C10A | 122.5 (5) |
C6A—C5A—H5A | 119.8 | C16—C17—C18 | 117.9 (5) |
C7—C6—C5 | 121.6 (5) | C16—C17—H17 | 121.1 |
C7—C6—H6 | 119.2 | C18—C17—H17 | 121.1 |
C5—C6—H6 | 119.2 | C16A—C17A—C18A | 119.9 (6) |
C7A—C6A—C5A | 121.7 (6) | C16A—C17A—H17A | 119 (4) |
C7A—C6A—H6A | 119.2 | C18A—C17A—H17A | 121 (4) |
C5A—C6A—H6A | 119.2 | C19—C18—C17 | 119.0 (6) |
C6—C7—C8 | 117.0 (5) | C19—C18—H18 | 120.5 |
C6—C7—H7 | 121.5 | C17—C18—H18 | 120.5 |
C8—C7—H7 | 121.5 | C19A—C18A—C17A | 118.2 (6) |
C6A—C7A—C8A | 118.2 (5) | C19A—C18A—H18A | 120.9 |
C6A—C7A—H7A | 120.9 | C17A—C18A—H18A | 120.9 |
C8A—C7A—H7A | 120.9 | C20—C19—C18 | 119.2 (5) |
N1—C8—C7 | 129.7 (5) | C20—C19—H19 | 120.4 |
N1—C8—C3 | 107.6 (4) | C18—C19—H19 | 120.4 |
C7—C8—C3 | 122.7 (5) | C18A—C19A—C20A | 118.2 (5) |
N1A—C8A—C7A | 130.8 (5) | C18A—C19A—H19A | 120.9 |
N1A—C8A—C3A | 107.6 (4) | C20A—C19A—H19A | 120.9 |
C7A—C8A—C3A | 121.5 (5) | N5—C20—C19 | 123.9 (6) |
N2—C9—C1 | 119.2 (5) | N5—C20—H20 | 118.0 |
N2—C9—H9 | 124 (3) | C19—C20—H20 | 118.0 |
C1—C9—H9 | 116 (3) | N5A—C20A—C19A | 124.3 (6) |
N2A—C9A—C1A | 120.6 (4) | N5A—C20A—H20A | 117.8 |
N2A—C9A—H9A | 119.7 | C19A—C20A—H20A | 117.8 |
C1A—C9A—H9A | 119.7 | C8—N1—C1 | 109.0 (4) |
N3—C10—C16 | 117.5 (4) | C8—N1—H1 | 125.5 |
N3—C10—C11 | 123.4 (4) | C1—N1—H1 | 125.5 |
C16—C10—C11 | 119.1 (4) | C1A—N1A—C8A | 109.0 (4) |
N3A—C10A—C16A | 118.1 (4) | C1A—N1A—H1A | 125.5 |
N3A—C10A—C11A | 122.5 (4) | C8A—N1A—H1A | 125.5 |
C16A—C10A—C11A | 119.4 (4) | C9—N2—N3 | 113.6 (4) |
N4—C11—C12 | 122.9 (5) | C9A—N2A—N3A | 114.6 (4) |
N4—C11—C10 | 114.2 (4) | C10—N3—N2 | 112.6 (4) |
C12—C11—C10 | 122.9 (5) | C10A—N3A—N2A | 113.2 (4) |
N4A—C11A—C12A | 121.9 (5) | C15—N4—C11 | 116.6 (5) |
N4A—C11A—C10A | 115.7 (4) | C15A—N4A—C11A | 118.1 (5) |
C12A—C11A—C10A | 122.3 (5) | C16—N5—C20 | 116.2 (5) |
C11—C12—C13 | 118.9 (5) | C16A—N5A—C20A | 116.9 (5) |
| | | |
N1—C1—C2—C3 | −0.1 (6) | C12A—C13A—C14A—C15A | −1.7 (9) |
C9—C1—C2—C3 | 174.1 (5) | C13—C14—C15—N4 | 1.1 (9) |
N1A—C1A—C2A—C3A | −1.8 (6) | C13A—C14A—C15A—N4A | −0.1 (10) |
C9A—C1A—C2A—C3A | 176.0 (5) | N3—C10—C16—N5 | 157.9 (5) |
C1—C2—C3—C4 | −178.8 (5) | C11—C10—C16—N5 | −22.8 (6) |
C1—C2—C3—C8 | 0.5 (6) | N3—C10—C16—C17 | −22.6 (7) |
C1A—C2A—C3A—C4A | −177.1 (5) | C11—C10—C16—C17 | 156.7 (5) |
C1A—C2A—C3A—C8A | 1.3 (6) | N3A—C10A—C16A—N5A | 156.8 (5) |
C8—C3—C4—C5 | −1.0 (7) | C11A—C10A—C16A—N5A | −23.9 (6) |
C2—C3—C4—C5 | 178.2 (6) | N3A—C10A—C16A—C17A | −23.2 (7) |
C8A—C3A—C4A—C5A | 0.1 (8) | C11A—C10A—C16A—C17A | 156.1 (5) |
C2A—C3A—C4A—C5A | 178.3 (6) | N5—C16—C17—C18 | −0.4 (8) |
C3—C4—C5—C6 | 2.2 (8) | C10—C16—C17—C18 | −179.9 (4) |
C3A—C4A—C5A—C6A | 1.9 (8) | N5A—C16A—C17A—C18A | −0.1 (9) |
C4—C5—C6—C7 | −1.6 (8) | C10A—C16A—C17A—C18A | 179.8 (5) |
C4A—C5A—C6A—C7A | −2.6 (9) | C16—C17—C18—C19 | −0.2 (8) |
C5—C6—C7—C8 | −0.2 (7) | C16A—C17A—C18A—C19A | −0.8 (9) |
C5A—C6A—C7A—C8A | 1.1 (8) | C17—C18—C19—C20 | −0.5 (9) |
C6—C7—C8—N1 | −178.1 (5) | C17A—C18A—C19A—C20A | 0.6 (9) |
C6—C7—C8—C3 | 1.4 (7) | C18—C19—C20—N5 | 1.8 (10) |
C4—C3—C8—N1 | 178.8 (4) | C18A—C19A—C20A—N5A | 0.4 (10) |
C2—C3—C8—N1 | −0.6 (5) | C7—C8—N1—C1 | −179.9 (5) |
C4—C3—C8—C7 | −0.8 (7) | C3—C8—N1—C1 | 0.6 (5) |
C2—C3—C8—C7 | 179.8 (4) | C2—C1—N1—C8 | −0.3 (5) |
C6A—C7A—C8A—N1A | −178.9 (5) | C9—C1—N1—C8 | −175.2 (4) |
C6A—C7A—C8A—C3A | 0.9 (7) | C2A—C1A—N1A—C8A | 1.6 (5) |
C4A—C3A—C8A—N1A | 178.3 (4) | C9A—C1A—N1A—C8A | −176.4 (4) |
C2A—C3A—C8A—N1A | −0.3 (5) | C7A—C8A—N1A—C1A | 179.1 (5) |
C4A—C3A—C8A—C7A | −1.5 (7) | C3A—C8A—N1A—C1A | −0.7 (5) |
C2A—C3A—C8A—C7A | 179.8 (4) | C1—C9—N2—N3 | −178.8 (4) |
C2—C1—C9—N2 | −169.4 (5) | C1A—C9A—N2A—N3A | −179.0 (4) |
N1—C1—C9—N2 | 4.3 (7) | C16—C10—N3—N2 | −174.5 (4) |
C2A—C1A—C9A—N2A | −171.7 (5) | C11—C10—N3—N2 | 6.2 (7) |
N1A—C1A—C9A—N2A | 5.9 (7) | C9—N2—N3—C10 | −147.2 (5) |
N3—C10—C11—N4 | 80.6 (6) | C16A—C10A—N3A—N2A | −175.0 (4) |
C16—C10—C11—N4 | −98.7 (5) | C11A—C10A—N3A—N2A | 5.7 (7) |
N3—C10—C11—C12 | −100.5 (6) | C9A—N2A—N3A—C10A | −147.6 (5) |
C16—C10—C11—C12 | 80.2 (6) | C14—C15—N4—C11 | 0.6 (8) |
N3A—C10A—C11A—N4A | 79.2 (6) | C12—C11—N4—C15 | −0.4 (7) |
C16A—C10A—C11A—N4A | −100.0 (5) | C10—C11—N4—C15 | 178.5 (4) |
N3A—C10A—C11A—C12A | −99.6 (6) | C14A—C15A—N4A—C11A | 2.6 (9) |
C16A—C10A—C11A—C12A | 81.1 (6) | C12A—C11A—N4A—C15A | −3.3 (8) |
N4—C11—C12—C13 | −1.6 (7) | C10A—C11A—N4A—C15A | 177.9 (5) |
C10—C11—C12—C13 | 179.6 (5) | C17—C16—N5—C20 | 1.6 (8) |
N4A—C11A—C12A—C13A | 1.6 (8) | C10—C16—N5—C20 | −178.9 (4) |
C10A—C11A—C12A—C13A | −179.7 (5) | C19—C20—N5—C16 | −2.3 (9) |
C11—C12—C13—C14 | 3.3 (8) | C17A—C16A—N5A—C20A | 1.2 (8) |
C11A—C12A—C13A—C14A | 1.0 (8) | C10A—C16A—N5A—C20A | −178.8 (4) |
C12—C13—C14—C15 | −3.0 (8) | C19A—C20A—N5A—C16A | −1.3 (9) |
Poly[[2-({[bis(pyridin-2-yl)methylidene]hydrazin-1-ylidene}methyl)-1
H-indole]di-µ-chlorido-cadmium(II)] (pCd2)
top
Crystal data top
[CdCl2(C20H15N5)] | Dx = 1.584 Mg m−3 |
Mr = 508.67 | Cu Kα radiation, λ = 1.54184 Å |
Trigonal, R3c:H | Cell parameters from 6284 reflections |
a = 34.6379 (7) Å | θ = 9.5–71.0° |
c = 18.4784 (3) Å | µ = 10.62 mm−1 |
V = 19199.9 (8) Å3 | T = 293 K |
Z = 36 | Needle, clear light yellow |
F(000) = 9072 | 0.21 × 0.06 × 0.03 mm |
Data collection top
Bruker SMART CCD area detector diffractometer | 3651 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.020 |
phi and ω scans | θmax = 70.9°, θmin = 4.4° |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | h = −36→42 |
Tmin = 0.487, Tmax = 0.727 | k = −37→41 |
13934 measured reflections | l = −20→22 |
4079 independent reflections | |
Refinement top
Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.022 | w = 1/[σ2(Fo2) + (0.0235P)2 + 26.2978P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.057 | (Δ/σ)max = 0.003 |
S = 1.09 | Δρmax = 0.38 e Å−3 |
4079 reflections | Δρmin = −0.31 e Å−3 |
254 parameters | Extinction correction: SHELXL2016 (Sheldrick, 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
0 restraints | Extinction coefficient: 0.0000025 (7) |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
C1 | 0.09400 (9) | 0.24472 (8) | 0.42912 (14) | 0.0454 (6) | |
C2 | 0.06504 (10) | 0.21722 (9) | 0.37752 (15) | 0.0533 (7) | |
H2 | 0.052534 | 0.225515 | 0.340423 | 0.064* | |
C3 | 0.05759 (9) | 0.17379 (9) | 0.39091 (15) | 0.0485 (6) | |
C4 | 0.03165 (10) | 0.13185 (10) | 0.35796 (18) | 0.0623 (8) | |
H4 | 0.014419 | 0.128848 | 0.317469 | 0.075* | |
C5 | 0.03210 (11) | 0.09567 (10) | 0.38614 (19) | 0.0674 (9) | |
H5 | 0.014970 | 0.067905 | 0.364584 | 0.081* | |
C6 | 0.05778 (11) | 0.09964 (10) | 0.44659 (19) | 0.0660 (8) | |
H6 | 0.057510 | 0.074392 | 0.464353 | 0.079* | |
C7 | 0.08359 (10) | 0.13989 (10) | 0.48092 (16) | 0.0565 (7) | |
H7 | 0.100534 | 0.142151 | 0.521426 | 0.068* | |
C8 | 0.08335 (9) | 0.17700 (8) | 0.45273 (14) | 0.0444 (6) | |
C9 | 0.10845 (9) | 0.29131 (8) | 0.43834 (14) | 0.0458 (6) | |
H9 | 0.097544 | 0.304495 | 0.406742 | 0.055* | |
C10 | 0.17982 (7) | 0.39155 (8) | 0.50038 (12) | 0.0350 (5) | |
C11 | 0.18337 (7) | 0.43616 (8) | 0.50310 (12) | 0.0362 (5) | |
C12 | 0.22394 (9) | 0.47533 (9) | 0.49885 (16) | 0.0529 (7) | |
H12 | 0.250248 | 0.474485 | 0.494282 | 0.063* | |
C13 | 0.22500 (10) | 0.51565 (9) | 0.50145 (17) | 0.0625 (8) | |
H13 | 0.252062 | 0.542222 | 0.499212 | 0.075* | |
C14 | 0.18595 (10) | 0.51626 (9) | 0.50734 (16) | 0.0582 (7) | |
H14 | 0.185895 | 0.543066 | 0.509179 | 0.070* | |
C15 | 0.14660 (9) | 0.47596 (9) | 0.51048 (15) | 0.0487 (6) | |
H15 | 0.119955 | 0.476184 | 0.514635 | 0.058* | |
C16 | 0.22104 (7) | 0.38849 (8) | 0.50950 (12) | 0.0368 (5) | |
C17 | 0.23295 (9) | 0.36554 (9) | 0.46175 (14) | 0.0480 (6) | |
H17 | 0.215069 | 0.350835 | 0.422090 | 0.058* | |
C18 | 0.27198 (10) | 0.36487 (11) | 0.47407 (16) | 0.0578 (7) | |
H18 | 0.280967 | 0.349941 | 0.442539 | 0.069* | |
C19 | 0.29716 (9) | 0.38652 (11) | 0.53336 (16) | 0.0587 (8) | |
H19 | 0.323451 | 0.386395 | 0.542971 | 0.070* | |
C20 | 0.28294 (9) | 0.40852 (10) | 0.57865 (15) | 0.0541 (7) | |
H20 | 0.300185 | 0.422940 | 0.619039 | 0.065* | |
N1 | 0.10545 (7) | 0.22063 (7) | 0.47458 (11) | 0.0452 (5) | |
H1 | 0.123466 | 0.231180 | 0.510672 | 0.054* | |
N2 | 0.13572 (6) | 0.31548 (6) | 0.48820 (11) | 0.0410 (5) | |
N3 | 0.14077 (6) | 0.35823 (6) | 0.48902 (10) | 0.0373 (4) | |
N4 | 0.14507 (6) | 0.43697 (6) | 0.50783 (10) | 0.0386 (4) | |
N5 | 0.24575 (7) | 0.41024 (7) | 0.56764 (11) | 0.0432 (5) | |
Cd1 | 0.07678 (2) | 0.37014 (2) | 0.49986 (2) | 0.03375 (6) | |
Cl1 | 0.02612 (2) | 0.28840 (2) | 0.52485 (3) | 0.04579 (15) | |
Cl2 | 0.03104 (2) | 0.40899 (2) | 0.47715 (3) | 0.04509 (14) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.0442 (14) | 0.0389 (13) | 0.0567 (15) | 0.0234 (12) | −0.0098 (12) | −0.0045 (11) |
C2 | 0.0572 (17) | 0.0483 (15) | 0.0599 (16) | 0.0304 (14) | −0.0176 (13) | −0.0073 (13) |
C3 | 0.0468 (15) | 0.0452 (14) | 0.0546 (15) | 0.0237 (12) | −0.0067 (12) | −0.0079 (12) |
C4 | 0.0547 (18) | 0.0521 (17) | 0.0742 (19) | 0.0224 (14) | −0.0130 (15) | −0.0161 (15) |
C5 | 0.0594 (19) | 0.0410 (16) | 0.091 (2) | 0.0170 (14) | 0.0048 (17) | −0.0122 (15) |
C6 | 0.071 (2) | 0.0404 (15) | 0.089 (2) | 0.0293 (15) | 0.0187 (18) | 0.0090 (15) |
C7 | 0.0626 (18) | 0.0527 (17) | 0.0606 (17) | 0.0336 (15) | 0.0057 (14) | 0.0070 (13) |
C8 | 0.0448 (14) | 0.0406 (13) | 0.0509 (14) | 0.0236 (12) | 0.0005 (11) | −0.0031 (11) |
C9 | 0.0448 (14) | 0.0408 (13) | 0.0561 (15) | 0.0246 (12) | −0.0064 (12) | −0.0026 (11) |
C10 | 0.0306 (11) | 0.0398 (12) | 0.0361 (11) | 0.0186 (10) | −0.0042 (9) | −0.0022 (9) |
C11 | 0.0319 (11) | 0.0350 (12) | 0.0383 (12) | 0.0142 (10) | −0.0020 (9) | −0.0018 (9) |
C12 | 0.0358 (13) | 0.0404 (14) | 0.0752 (18) | 0.0135 (11) | −0.0020 (12) | 0.0019 (13) |
C13 | 0.0495 (17) | 0.0356 (14) | 0.087 (2) | 0.0098 (13) | −0.0072 (15) | −0.0006 (14) |
C14 | 0.0664 (19) | 0.0361 (14) | 0.0722 (18) | 0.0258 (14) | −0.0094 (15) | −0.0083 (13) |
C15 | 0.0480 (15) | 0.0425 (14) | 0.0612 (16) | 0.0267 (12) | −0.0046 (12) | −0.0107 (12) |
C16 | 0.0305 (11) | 0.0412 (13) | 0.0413 (12) | 0.0199 (10) | −0.0027 (9) | −0.0014 (10) |
C17 | 0.0422 (14) | 0.0582 (16) | 0.0466 (14) | 0.0273 (13) | −0.0048 (11) | −0.0121 (12) |
C18 | 0.0544 (17) | 0.076 (2) | 0.0598 (17) | 0.0448 (16) | −0.0005 (14) | −0.0145 (15) |
C19 | 0.0468 (16) | 0.083 (2) | 0.0652 (18) | 0.0464 (16) | −0.0113 (13) | −0.0137 (16) |
C20 | 0.0445 (15) | 0.0737 (19) | 0.0540 (15) | 0.0370 (15) | −0.0159 (12) | −0.0161 (14) |
N1 | 0.0476 (12) | 0.0420 (11) | 0.0511 (12) | 0.0261 (10) | −0.0115 (10) | −0.0079 (9) |
N2 | 0.0355 (10) | 0.0347 (10) | 0.0559 (12) | 0.0199 (9) | −0.0042 (9) | −0.0011 (9) |
N3 | 0.0364 (10) | 0.0329 (10) | 0.0470 (11) | 0.0207 (9) | −0.0049 (8) | −0.0019 (8) |
N4 | 0.0351 (10) | 0.0350 (10) | 0.0447 (11) | 0.0168 (9) | −0.0031 (8) | −0.0054 (8) |
N5 | 0.0358 (11) | 0.0544 (13) | 0.0453 (11) | 0.0270 (10) | −0.0063 (9) | −0.0095 (9) |
Cd1 | 0.02975 (9) | 0.03423 (10) | 0.03777 (10) | 0.01637 (7) | −0.00226 (6) | 0.00158 (6) |
Cl1 | 0.0447 (3) | 0.0366 (3) | 0.0374 (3) | 0.0064 (2) | −0.0041 (2) | −0.0020 (2) |
Cl2 | 0.0501 (3) | 0.0659 (4) | 0.0368 (3) | 0.0421 (3) | 0.0017 (2) | 0.0043 (3) |
Geometric parameters (Å, º) top
C1—C2 | 1.366 (4) | C12—C13 | 1.379 (4) |
C1—N1 | 1.375 (3) | C13—C14 | 1.368 (4) |
C1—C9 | 1.441 (3) | C14—C15 | 1.381 (4) |
C2—C3 | 1.415 (4) | C15—N4 | 1.326 (3) |
C3—C4 | 1.408 (4) | C16—N5 | 1.345 (3) |
C3—C8 | 1.419 (4) | C16—C17 | 1.381 (3) |
C4—C5 | 1.364 (4) | C17—C18 | 1.383 (4) |
C5—C6 | 1.391 (5) | C18—C19 | 1.367 (4) |
C6—C7 | 1.378 (4) | C19—C20 | 1.378 (4) |
C7—C8 | 1.391 (4) | C20—N5 | 1.335 (3) |
C8—N1 | 1.370 (3) | N2—N3 | 1.401 (3) |
C9—N2 | 1.285 (3) | N3—Cd1 | 2.4575 (19) |
C10—N3 | 1.282 (3) | N4—Cd1 | 2.3450 (19) |
C10—C11 | 1.489 (3) | Cd1—Cl1 | 2.5181 (6) |
C10—C16 | 1.493 (3) | Cd1—Cl2 | 2.5746 (6) |
C11—N4 | 1.344 (3) | Cd1—Cl1i | 2.6561 (6) |
C11—C12 | 1.384 (3) | Cd1—Cl2ii | 2.6612 (6) |
| | | |
C2—C1—N1 | 109.7 (2) | C19—C18—C17 | 118.9 (2) |
C2—C1—C9 | 125.9 (2) | C18—C19—C20 | 118.9 (2) |
N1—C1—C9 | 124.3 (2) | N5—C20—C19 | 123.5 (2) |
C1—C2—C3 | 107.4 (2) | C8—N1—C1 | 108.5 (2) |
C4—C3—C2 | 134.8 (3) | C9—N2—N3 | 111.0 (2) |
C4—C3—C8 | 118.7 (3) | C10—N3—N2 | 118.11 (19) |
C2—C3—C8 | 106.5 (2) | C10—N3—Cd1 | 118.00 (15) |
C5—C4—C3 | 119.2 (3) | N2—N3—Cd1 | 122.12 (14) |
C4—C5—C6 | 121.1 (3) | C15—N4—C11 | 119.1 (2) |
C7—C6—C5 | 121.9 (3) | C15—N4—Cd1 | 120.98 (17) |
C6—C7—C8 | 117.5 (3) | C11—N4—Cd1 | 119.64 (15) |
N1—C8—C7 | 130.6 (3) | C20—N5—C16 | 117.1 (2) |
N1—C8—C3 | 107.8 (2) | N4—Cd1—N3 | 67.76 (6) |
C7—C8—C3 | 121.5 (3) | N4—Cd1—Cl1 | 152.90 (5) |
N2—C9—C1 | 123.0 (2) | N3—Cd1—Cl1 | 90.34 (5) |
N3—C10—C11 | 116.3 (2) | N4—Cd1—Cl2 | 94.30 (5) |
N3—C10—C16 | 124.8 (2) | N3—Cd1—Cl2 | 156.49 (5) |
C11—C10—C16 | 119.0 (2) | Cl1—Cd1—Cl2 | 110.65 (2) |
N4—C11—C12 | 120.8 (2) | N4—Cd1—Cl1i | 85.72 (5) |
N4—C11—C10 | 117.0 (2) | N3—Cd1—Cl1i | 102.69 (5) |
C12—C11—C10 | 122.2 (2) | Cl1—Cd1—Cl1i | 83.75 (2) |
C13—C12—C11 | 119.4 (3) | Cl2—Cd1—Cl1i | 90.436 (19) |
C14—C13—C12 | 119.5 (3) | N4—Cd1—Cl2ii | 96.11 (5) |
C13—C14—C15 | 118.1 (3) | N3—Cd1—Cl2ii | 83.49 (5) |
N4—C15—C14 | 123.0 (3) | Cl1—Cd1—Cl2ii | 97.04 (2) |
N5—C16—C17 | 122.9 (2) | Cl2—Cd1—Cl2ii | 83.511 (19) |
N5—C16—C10 | 114.4 (2) | Cl1i—Cd1—Cl2ii | 173.78 (2) |
C17—C16—C10 | 122.7 (2) | Cd1—Cl1—Cd1i | 94.281 (19) |
C16—C17—C18 | 118.7 (2) | Cd1—Cl2—Cd1ii | 96.248 (19) |
Symmetry codes: (i) x−y+1/3, −y+2/3, −z+7/6; (ii) y−1/3, x+1/3, −z+5/6. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···N5i | 0.86 | 2.13 | 2.987 (3) | 179 |
C9—H9···Cl2ii | 0.93 | 2.71 | 3.588 (3) | 159 |
C12—H12···N5 | 0.93 | 2.54 | 2.995 (4) | 110 |
C18—H18···Cl2iii | 0.93 | 2.83 | 3.607 (3) | 142 |
C20—H20···Cl1iv | 0.93 | 2.78 | 3.431 (3) | 128 |
Symmetry codes: (i) x−y+1/3, −y+2/3, −z+7/6; (ii) y−1/3, x+1/3, −z+5/6; (iii) −y+2/3, −x+1/3, z−1/6; (iv) x+1/3, x−y+2/3, z+1/6. |
Comparison of some bond lengths (Å) of two 2-DPHI molecules in the
asymmetric unit topBond | Value | Bond | Value | Difference (Å) |
N2—N3 | 1.421 (6) | N2A—N3A | 1.393 (5) | 0.028 |
C5—C6 | 1.387 (8) | C5A—C6A | 1.413 (8) | 0.026 |
C13—C14 | 1.377 (8) | C13A—C14A | 1.351 (8) | 0.026 |
C6—C7 | 1.379 (7) | C6A—C7A | 1.355 (8) | 0.024 |
Comparison of some bond angles (°) of two 2-DPHI molecules in the
asymmetric unit topAngle | Value | Angle | Value | Difference (°) |
C16—C17—C18 | 117.9 (5) | C16A—C17A—C18A | 119.9 (6) | 2.0 |
N4—C11—C10 | 114.2 (4) | N4A—C11A—C10A | 115.7 (4) | 1.5 |
C11—N4—C15 | 116.6 (5) | C11A—N4A—C15A | 118.1 (5) | 1.5 |
C2—C1—C9 | 130.5 (5) | C2A—C1A—C9A | 128.9 (4) | 1.4 |
C13—C14—C15 | 117.5 (5) | C13A—C14A—C15A | 118.9 (6) | 1.4 |
N2—C9—C1 | 119.2 (5) | N2A—C9A—C1A | 120.6 (4) | 1.4 |
C10—C16—C17 | 121.2 (5) | C10A—C16A—C17A | 122.5 (5) | 1.3 |
N5—C16—C17 | 123.8 (4) | N5A—C16A—C17A | 122.5 (5) | 1.3 |
C6—C7—C8 | 117.0 (5) | C6A—C7A—C8A | 118.2 (5) | 1.2 |
N4—C15—C14 | 124.8 (6) | N4A—C15A—C14A | 123.6 (6) | 1.2 |
C3—C8—C7 | 122.7 (5) | C3A—C8A—C7A | 121.5 (5) | 1.2 |
N1—C8—C7 | 129.7 (5) | N1A—C8A—C7A | 130.8 (5) | 1.1 |
N3—C10—C11 | 123.4 (4) | N3A—C10A—C11A | 122.5 (4) | 1.1 |
C18—C19—C20 | 119.2 (5) | C18A—C19A—C20A | 118.2 (5) | 1.0 |
N1—C1—C9 | 120.7 (4) | N1A—C1A—C9A | 121.7 (4) | 1.0 |
N4—C11—C12 | 122.9 (5) | N4A—C11A—C12A | 121.9 (5) | 1.0 |
N3—N2—C9 | 113.6 (4) | N3A—N2A—C9A | 114.6 (4) | 1.0 |
Hydrogen-bond geometries (Å, °) of 2-DPHI topD—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···N4i | 0.86 | 2.21 | 3.042 (6) | 162 |
N1A—H1A···N4Ai | 0.86 | 2.20 | 3.030 (6) | 163 |
Symmetry code: (i) x-1, y, z. |
π–π interaction geometries (Å, °) of 2-DPHI topd represents the distance between the centroids of the two rings;
α is the dihedral angle between the two rings;
β is the angle between the line connecting the two centroids and the normal
to ring I; γ is the angle between the line connecting the two
centroids and the normal to ring J;
e denotes the perpendicular distance from the centroid of ring
I to ring J;
f denotes the perpendicular distance from the centroid of ring
J to ring I.
Ring definitions: ring 1 N1/C1–C3/C8;
ring 2 C3–C8;
ring 3: N1A/C1A–C3A/C8A;
ring 4: C3A–C8A. |
π–π interactions (I→J) | d | α | β | γ | e | f |
Cg1→Cg2i | 3.876 (3) | 1.27 | 29.09 | 29.18 | 3.384 | 3.387 |
Cg2→Cg1ii | 3.875 (3) | 1.27 | 29.18 | 29.09 | 3.386 | 3.384 |
Cg3→Cg4i | 3.886 (3) | 1.64 | 28.42 | 28.53 | 3.414 | 3.418 |
Cg4→Cg3ii | 3.886 (3) | 1.64 | 28.53 | 28.42 | 3.418 | 3.414 |
Symmetry codes: (i) x+1, y, z;
(ii) x-1, y, z. |
Characteristic UV absorption peaks of 2-DPHI and the corresponding
predicted major orbital transitions topλexp (nm) | λcal (nm) | f | MO transitions (configurations) |
205.5 | 219.99 | 0.3973 | H→L+6 (38.9%) |
| | | H-5→L+2 (5.6%) |
| | | H→L+4 (5.4%) |
| 221.36 | 0.4692 | H-1→L+6 (30.9%) |
| | | H-1→L+5 (25.4%) |
| | | H→L+6 (6.5%) |
| | | H→L+5 (5.0%) |
252 | 242.73 | 0.2481 | H→L+3 (15.6%) |
| | | H→L+1 (10.9%) |
| | | H-2→L+1 (8.2%) |
| | | H→L+2 (6.0%) |
| | | H-3→L+2 (5.8%) |
| | | H-5→L (5.1%) |
| 249.26 | 0.36947 | H-5 → L (17.0%) |
| | | H → L+2 (14.1%) |
| | | H → L+1 (8.4%) |
| | | H → L+5 (8.0%) |
| | | H-10 → L (7.5%) |
366.5 | 363.80 | 1.41636 | H→L (81.9%) |
IC50 (µM) values of the Schiff base complex, its corresponding ligand
and the metal salt across four cell lines topCompound | A375 (95% CI) | A549 (95% CI) | HeLa (95% CI) | HFF-1 (95% CI) |
2-DPHI | 12.22 (10.98–13.62) | 15.17 (13.42–17.19) | >100 | >100 |
pCd2 | 4.88 (4.43–5.35) | 20.16 (19.19–21.18) | 5.20 (4.90–5.51) | 98.11 (97.89–98.33) |
CdCl2 | 10.70 (9.47–12.00) | 16.55 (15.21–17.94) | 3.63 (3.33–3.95) | 21.31 (21.02–21.67) |
Cisplatin | 5.88 (5.42–6.36) | 5.05 (4.13–6.18) | 5.96 (5.42–6.56) | 33.34 (33.04–33.64) |