The title binary complex, 2C
6H
6O
2·C
6H
12N
4, is constructed from hexamethylenetetramine, positioned about a twofold symmetry operator, and 1,2-dihydroxybenzene. Each of the four tertiary amine N atoms participates in O—H
N contacts that produce molecular strands that propagate along the
c axis.
Supporting information
CCDC reference: 630490
Key indicators
- Single-crystal X-ray study
- T = 298 K
- Mean (C-C) = 0.004 Å
- R factor = 0.051
- wR factor = 0.119
- Data-to-parameter ratio = 12.8
checkCIF/PLATON results
No syntax errors found
Alert level C
PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ?
PLAT764_ALERT_4_C Overcomplete CIF Bond List Detected (Rep/Expd) . 1.21 Ratio
PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 1
C6 H12 N4
0 ALERT level A = In general: serious problem
0 ALERT level B = Potentially serious problem
3 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
0 ALERT type 2 Indicator that the structure model may be wrong or deficient
0 ALERT type 3 Indicator that the structure quality may be low
2 ALERT type 4 Improvement, methodology, query or suggestion
0 ALERT type 5 Informative message, check
Data collection: XSCANS (Bruker, 1999); cell refinement: XSCANS; data reduction: XPREP (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: X-SEED.
Bis(1,2-dihydroxybenzene) hexamethylenetetramine
top
Crystal data top
2C6H6O2·C6H12N4 | F(000) = 768 |
Mr = 360.41 | Dx = 1.326 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 33 reflections |
a = 23.794 (2) Å | θ = 20.4–22.6° |
b = 6.8422 (5) Å | µ = 0.10 mm−1 |
c = 13.244 (1) Å | T = 298 K |
β = 123.135 (6)° | Plate, transparent colorless |
V = 1805.5 (3) Å3 | 0.41 × 0.41 × 0.20 mm |
Z = 4 | |
Data collection top
Siemens P4 diffractometer | Rint = 0.022 |
Radiation source: fine-focus sealed tube | θmax = 25.4°, θmin = 2.0° |
Graphite monochromator | h = −1→28 |
ω/2θ\ scans | k = −1→8 |
1921 measured reflections | l = −14→13 |
1626 independent reflections | 3 standard reflections every 97 reflections |
1054 reflections with I > 2σ(I) | intensity decay: none |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.051 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.119 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0478P)2 + 0.6351P] where P = (Fo2 + 2Fc2)/3 |
1626 reflections | (Δ/σ)max < 0.001 |
127 parameters | Δρmax = 0.15 e Å−3 |
0 restraints | Δρmin = −0.25 e Å−3 |
Special details top
Experimental. 1H NMR (acetone-d6): δ 4.63 (s, 12H, HMTA-CH2), 6.62 (dd, J = 5.8 and 3.5?Hz,
4H, H-2, 5), 6.78 (dd, J = 5.8 and 3.5?Hz, 4H, H-3, 4). 13 C NMR (acetone-d6):
δ 145.6 (C7—C10), 119.4 (C3, 4), 115.7 (C2, 5), 74.4 (C1, 6). |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
O1 | 0.08901 (9) | 0.7382 (3) | 0.13606 (15) | 0.0616 (6) | |
O2 | 0.11329 (11) | 0.4389 (3) | 0.03014 (17) | 0.0643 (6) | |
N1 | 0.04573 (9) | 1.0108 (3) | 0.23315 (15) | 0.0393 (5) | |
N2 | 0.04092 (9) | 1.2620 (3) | 0.35904 (15) | 0.0386 (5) | |
C1 | 0.13760 (11) | 0.6071 (4) | 0.2089 (2) | 0.0410 (6) | |
C2 | 0.17460 (12) | 0.6174 (4) | 0.3328 (2) | 0.0470 (6) | |
H2 | 0.1662 | 0.7169 | 0.3707 | 0.056* | |
C3 | 0.22395 (12) | 0.4820 (4) | 0.4012 (2) | 0.0558 (8) | |
H3 | 0.2489 | 0.4903 | 0.4849 | 0.067* | |
C4 | 0.23609 (13) | 0.3361 (4) | 0.3459 (2) | 0.0613 (8) | |
H4 | 0.2696 | 0.2450 | 0.3919 | 0.074* | |
C5 | 0.19892 (13) | 0.3225 (4) | 0.2220 (2) | 0.0562 (7) | |
H5 | 0.2072 | 0.2215 | 0.1849 | 0.067* | |
C6 | 0.14958 (12) | 0.4572 (4) | 0.1527 (2) | 0.0433 (6) | |
C7 | 0.08446 (11) | 1.1372 (4) | 0.3404 (2) | 0.0438 (6) | |
H7A | 0.1115 | 1.0560 | 0.4111 | 0.053* | |
H7B | 0.1146 | 1.2188 | 0.3309 | 0.053* | |
C8 | 0.0000 | 1.3817 (5) | 0.2500 | 0.0412 (8) | |
H8A | −0.0293 | 1.4652 | 0.2606 | 0.049* | 0.50 |
H8B | 0.0293 | 1.4652 | 0.2394 | 0.049* | 0.50 |
C9 | −0.00435 (12) | 1.1370 (3) | 0.37265 (19) | 0.0419 (6) | |
H9A | −0.0335 | 1.2183 | 0.3849 | 0.050* | |
H9B | 0.0219 | 1.0558 | 0.4437 | 0.050* | |
C10 | 0.0000 | 0.8920 (5) | 0.2500 | 0.0450 (9) | |
H10A | −0.0263 | 0.8085 | 0.1802 | 0.054* | 0.50 |
H10B | 0.0263 | 0.8085 | 0.3198 | 0.054* | 0.50 |
H1O | 0.0839 (15) | 0.827 (4) | 0.182 (3) | 0.086 (10)* | |
H2O | 0.0902 (15) | 0.530 (5) | −0.003 (3) | 0.077 (11)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.0695 (13) | 0.0651 (13) | 0.0405 (10) | 0.0360 (11) | 0.0238 (9) | 0.0047 (9) |
O2 | 0.0907 (16) | 0.0549 (13) | 0.0490 (11) | 0.0317 (12) | 0.0393 (11) | 0.0079 (10) |
N1 | 0.0423 (11) | 0.0358 (10) | 0.0401 (11) | 0.0073 (9) | 0.0227 (9) | 0.0017 (9) |
N2 | 0.0469 (11) | 0.0335 (11) | 0.0399 (10) | −0.0099 (10) | 0.0265 (9) | −0.0072 (9) |
C1 | 0.0390 (13) | 0.0429 (14) | 0.0456 (13) | 0.0089 (12) | 0.0260 (12) | 0.0081 (12) |
C2 | 0.0466 (15) | 0.0498 (16) | 0.0451 (14) | 0.0014 (13) | 0.0255 (12) | 0.0011 (12) |
C3 | 0.0444 (15) | 0.070 (2) | 0.0461 (15) | 0.0018 (15) | 0.0205 (13) | 0.0145 (14) |
C4 | 0.0513 (17) | 0.071 (2) | 0.0639 (18) | 0.0229 (15) | 0.0333 (15) | 0.0320 (16) |
C5 | 0.0680 (17) | 0.0494 (16) | 0.0699 (18) | 0.0219 (14) | 0.0496 (16) | 0.0165 (14) |
C6 | 0.0490 (14) | 0.0455 (15) | 0.0457 (14) | 0.0104 (13) | 0.0324 (12) | 0.0098 (12) |
C7 | 0.0377 (13) | 0.0458 (15) | 0.0439 (13) | −0.0001 (12) | 0.0197 (11) | 0.0013 (12) |
C8 | 0.055 (2) | 0.0278 (17) | 0.0518 (19) | 0.000 | 0.0362 (18) | 0.000 |
C9 | 0.0535 (14) | 0.0384 (13) | 0.0392 (12) | −0.0080 (12) | 0.0288 (12) | −0.0025 (11) |
C10 | 0.058 (2) | 0.0240 (17) | 0.0426 (18) | 0.000 | 0.0211 (17) | 0.000 |
Geometric parameters (Å, º) top
O1—C1 | 1.361 (3) | C4—C5 | 1.377 (4) |
O1—H1O | 0.91 (3) | C4—H4 | 0.9300 |
O2—C6 | 1.365 (3) | C5—C6 | 1.375 (3) |
O2—H2O | 0.79 (3) | C5—H5 | 0.9300 |
N1—C10 | 1.470 (3) | C7—H7A | 0.9700 |
N1—C9i | 1.473 (3) | C7—H7B | 0.9700 |
N1—C7 | 1.478 (3) | C8—N2i | 1.472 (2) |
N2—C9 | 1.462 (3) | C8—H8A | 0.9700 |
N2—C7 | 1.464 (3) | C8—H8B | 0.9700 |
N2—C8 | 1.472 (2) | C9—N1i | 1.473 (3) |
C1—C2 | 1.376 (3) | C9—H9A | 0.9700 |
C1—C6 | 1.386 (3) | C9—H9B | 0.9700 |
C2—C3 | 1.376 (3) | C10—N1i | 1.470 (3) |
C2—H2 | 0.9300 | C10—H10A | 0.9700 |
C3—C4 | 1.360 (4) | C10—H10B | 0.9700 |
C3—H3 | 0.9300 | | |
| | | |
C1—O1—H1O | 109.7 (18) | C5—C6—C1 | 119.3 (2) |
C6—O2—H2O | 112 (2) | N2—C7—N1 | 112.12 (17) |
C10—N1—C9i | 107.64 (16) | N2—C7—H7A | 109.2 |
C10—N1—C7 | 107.58 (16) | N1—C7—H7A | 109.2 |
C9i—N1—C7 | 108.21 (17) | N2—C7—H7B | 109.2 |
C9—N2—C7 | 108.47 (18) | N1—C7—H7B | 109.2 |
C9—N2—C8 | 108.04 (16) | H7A—C7—H7B | 107.9 |
C7—N2—C8 | 107.97 (15) | N2i—C8—N2 | 112.4 (2) |
O1—C1—C2 | 123.6 (2) | N2i—C8—H8A | 109.1 |
O1—C1—C6 | 116.8 (2) | N2—C8—H8A | 109.1 |
C2—C1—C6 | 119.6 (2) | N2i—C8—H8B | 109.1 |
C1—C2—C3 | 120.6 (3) | N2—C8—H8B | 109.1 |
C1—C2—H2 | 119.7 | H8A—C8—H8B | 107.9 |
C3—C2—H2 | 119.7 | N2—C9—N1i | 112.35 (17) |
C4—C3—C2 | 119.7 (2) | N2—C9—H9A | 109.1 |
C4—C3—H3 | 120.1 | N1i—C9—H9A | 109.1 |
C2—C3—H3 | 120.1 | N2—C9—H9B | 109.1 |
C3—C4—C5 | 120.3 (2) | N1i—C9—H9B | 109.1 |
C3—C4—H4 | 119.9 | H9A—C9—H9B | 107.9 |
C5—C4—H4 | 119.9 | N1i—C10—N1 | 112.8 (3) |
C6—C5—C4 | 120.5 (3) | N1i—C10—H10A | 109.0 |
C6—C5—H5 | 119.7 | N1—C10—H10A | 109.0 |
C4—C5—H5 | 119.7 | N1i—C10—H10B | 109.0 |
O2—C6—C5 | 119.1 (2) | N1—C10—H10B | 109.0 |
O2—C6—C1 | 121.6 (2) | H10A—C10—H10B | 107.8 |
| | | |
O1—C1—C2—C3 | −178.7 (2) | C9—N2—C7—N1 | 58.6 (2) |
C6—C1—C2—C3 | 0.9 (4) | C8—N2—C7—N1 | −58.2 (2) |
C1—C2—C3—C4 | −0.3 (4) | C10—N1—C7—N2 | −58.0 (2) |
C2—C3—C4—C5 | −0.5 (4) | C9i—N1—C7—N2 | 58.0 (2) |
C3—C4—C5—C6 | 0.6 (4) | C9—N2—C8—N2i | −58.50 (13) |
C4—C5—C6—O2 | −179.5 (2) | C7—N2—C8—N2i | 58.63 (13) |
C4—C5—C6—C1 | 0.0 (4) | C7—N2—C9—N1i | −58.7 (2) |
O1—C1—C6—O2 | −1.6 (4) | C8—N2—C9—N1i | 58.1 (2) |
C2—C1—C6—O2 | 178.8 (2) | C9i—N1—C10—N1i | −58.19 (13) |
O1—C1—C6—C5 | 178.9 (2) | C7—N1—C10—N1i | 58.22 (13) |
C2—C1—C6—C5 | −0.8 (4) | | |
Symmetry code: (i) −x, y, −z+1/2. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1O···N1 | 0.91 (3) | 1.89 (3) | 2.764 (3) | 162 (3) |
O2—H2O···O1 | 0.79 (3) | 2.34 (3) | 2.717 (3) | 111 (2) |
O2—H2O···N2ii | 0.79 (3) | 2.10 (3) | 2.832 (3) | 155 (3) |
Symmetry code: (ii) x, −y+2, z−1/2. |