

Supporting information
![]() | Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536814002335/bh2493sup1.cif |
![]() | Structure factor file (CIF format) https://doi.org/10.1107/S1600536814002335/bh2493Isup2.hkl |
![]() | Chemdraw file https://doi.org/10.1107/S1600536814002335/bh2493Isup3.cdx |
![]() | Chemical Markup Language (CML) file https://doi.org/10.1107/S1600536814002335/bh2493Isup4.cml |
CCDC reference: 984546
Key indicators
- Single-crystal X-ray study
- T = 293 K, P = 0.0 kPa
- Mean
(C-C) = 0.004 Å
- R factor = 0.056
- wR factor = 0.145
- Data-to-parameter ratio = 15.4
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT340_ALERT_3_C Low Bond Precision on C-C Bonds ............... 0.0043 Ang. PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 1 C16 H12 Cl N O PLAT906_ALERT_3_C Large K value in the Analysis of Variance ...... 11.735 Check PLAT906_ALERT_3_C Large K value in the Analysis of Variance ...... 2.741 Check PLAT911_ALERT_3_C Missing # FCF Refl Between THmin & STh/L= 0.600 11
Alert level G PLAT005_ALERT_5_G No _iucr_refine_instructions_details in the CIF Please Do ! PLAT199_ALERT_1_G Reported _cell_measurement_temperature ..... (K) 293 Check PLAT200_ALERT_1_G Reported _diffrn_ambient_temperature ..... (K) 293 Check PLAT793_ALERT_4_G The Model has Chirality at C7 (Verify) R PLAT910_ALERT_3_G Missing # of FCF Reflections Below Th(Min) ..... 4 Why ?
0 ALERT level A = Most likely a serious problem - resolve or explain 0 ALERT level B = A potentially serious problem, consider carefully 5 ALERT level C = Check. Ensure it is not caused by an omission or oversight 5 ALERT level G = General information/check it is not something unexpected 2 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 0 ALERT type 2 Indicator that the structure model may be wrong or deficient 5 ALERT type 3 Indicator that the structure quality may be low 2 ALERT type 4 Improvement, methodology, query or suggestion 1 ALERT type 5 Informative message, check
The synthesis follows that previously published (Yang, Shen & Chen, 2010). After Cs2CO3 (0.5 mg, 0.0015 mmol), (E)-3-(4-chlorophenyl)-1-phenylprop-2-en-1-one (72.8 mg, 0.3 mmol), and dioxane (0.5 ml) were charged into a dry Schlenk tube equipped with cold finger, Me3SiCN (57 ml, 0.45 mmol) and H2O (22 ml, 1.2 mmol) were added. The reaction mixture was refluxed until the reaction was complete (as monitored by TLC). Then, H2O (2 ml) was added at room temperature and the resulting mixture was extracted with EtOAc (5 ml). The extract was washed with H2O (2 ml), brine (3 ml), dried (Na2SO4), and concentrated. The crude product was purified by flash column chromatography on silica gel (PE–EtOAc, 15:1) to afford the pure title compound as a white solid (71.2 mg, 88% yield). Colorless single crystals of the title compound suitable for X-ray structure determination were obtained by vapor diffusion of petroleum ether into an ethyl acetate solution, at room temperature.
Carbon-bound H-atoms were placed in calculated positions (aromatic CH: 0.93 Å; methylene CH2: 0.97 Å; methine CH: 0.98 Å) and were included in the riding model approximation, with Uiso(H) set to 1.2Ueq(carrier C).
Data collection: CrysAlis PRO (Agilent, 2013); cell refinement: CrysAlis PRO (Agilent, 2013); data reduction: CrysAlis PRO (Agilent, 2013); program(s) used to solve structure: SHELXS2013 (Sheldrick, 2008); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: OLEX2 (Dolomanov et al., 2009).
![]() | Fig. 1. Thermal ellipsoid plot of the title compound at the 30% probability level; hydrogen atoms are drawn as spheres of arbitrary radius. |
![]() | Fig. 2. Packing diagram of the title compound. |
C16H12ClNO | Dx = 1.332 Mg m−3 |
Mr = 269.72 | Melting point: 383 K |
Orthorhombic, Pbcn | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2n 2ab | Cell parameters from 1186 reflections |
a = 31.247 (13) Å | θ = 3.7–22.6° |
b = 9.1889 (10) Å | µ = 0.27 mm−1 |
c = 9.3719 (12) Å | T = 293 K |
V = 2690.9 (12) Å3 | Block, colourless |
Z = 8 | 0.44 × 0.39 × 0.37 mm |
F(000) = 1120 |
Agilent SuperNova (Dual, Cu at zero, Eos) diffractometer | 2642 independent reflections |
Radiation source: MoKa | 1605 reflections with I > 2σ(I) |
Mirror monochromator | Rint = 0.044 |
Detector resolution: 16.0733 pixels mm-1 | θmax = 26.0°, θmin = 3.2° |
ω scans | h = −20→38 |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2013) | k = −11→10 |
Tmin = 0.584, Tmax = 1.000 | l = −11→11 |
6683 measured reflections |
Refinement on F2 | 0 constraints |
Least-squares matrix: full | Primary atom site location: structure-invariant direct methods |
R[F2 > 2σ(F2)] = 0.056 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.145 | H-atom parameters constrained |
S = 1.08 | w = 1/[σ2(Fo2) + (0.0418P)2 + 0.4921P]
where P = (Fo2 + 2Fc2)/3 |
2642 reflections | (Δ/σ)max < 0.001 |
172 parameters | Δρmax = 0.14 e Å−3 |
0 restraints | Δρmin = −0.23 e Å−3 |
C16H12ClNO | V = 2690.9 (12) Å3 |
Mr = 269.72 | Z = 8 |
Orthorhombic, Pbcn | Mo Kα radiation |
a = 31.247 (13) Å | µ = 0.27 mm−1 |
b = 9.1889 (10) Å | T = 293 K |
c = 9.3719 (12) Å | 0.44 × 0.39 × 0.37 mm |
Agilent SuperNova (Dual, Cu at zero, Eos) diffractometer | 2642 independent reflections |
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2013) | 1605 reflections with I > 2σ(I) |
Tmin = 0.584, Tmax = 1.000 | Rint = 0.044 |
6683 measured reflections |
R[F2 > 2σ(F2)] = 0.056 | 0 restraints |
wR(F2) = 0.145 | H-atom parameters constrained |
S = 1.08 | Δρmax = 0.14 e Å−3 |
2642 reflections | Δρmin = −0.23 e Å−3 |
172 parameters |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.49185 (3) | 0.22108 (11) | 0.94462 (10) | 0.0911 (4) | |
O1 | 0.31808 (7) | 0.4639 (2) | 1.6227 (2) | 0.0802 (7) | |
N1 | 0.39810 (8) | 0.1944 (3) | 1.6798 (3) | 0.0696 (7) | |
C1 | 0.41798 (9) | 0.1701 (3) | 1.2875 (3) | 0.0602 (8) | |
H1 | 0.4064 | 0.0933 | 1.3392 | 0.072* | |
C2 | 0.44356 (9) | 0.1413 (3) | 1.1702 (3) | 0.0655 (8) | |
H2 | 0.4492 | 0.0457 | 1.1436 | 0.079* | |
C3 | 0.46042 (8) | 0.2544 (4) | 1.0936 (3) | 0.0632 (8) | |
C4 | 0.45302 (9) | 0.3961 (4) | 1.1351 (3) | 0.0705 (9) | |
H4 | 0.4652 | 0.4728 | 1.0846 | 0.085* | |
C5 | 0.42749 (9) | 0.4235 (3) | 1.2521 (3) | 0.0655 (8) | |
H5 | 0.4224 | 0.5192 | 1.2796 | 0.079* | |
C6 | 0.40944 (8) | 0.3116 (3) | 1.3289 (3) | 0.0528 (7) | |
C7 | 0.37986 (8) | 0.3464 (3) | 1.4528 (3) | 0.0541 (7) | |
H7 | 0.3839 | 0.4493 | 1.4768 | 0.065* | |
C8 | 0.33248 (8) | 0.3254 (3) | 1.4156 (3) | 0.0561 (7) | |
H8A | 0.3269 | 0.3682 | 1.3228 | 0.067* | |
H8B | 0.3263 | 0.2221 | 1.4094 | 0.067* | |
C9 | 0.30306 (10) | 0.3939 (3) | 1.5247 (3) | 0.0579 (7) | |
C10 | 0.25590 (9) | 0.3757 (3) | 1.5110 (3) | 0.0541 (7) | |
C11 | 0.22948 (10) | 0.4530 (3) | 1.6019 (3) | 0.0699 (9) | |
H11 | 0.2415 | 0.5151 | 1.6692 | 0.084* | |
C12 | 0.18561 (11) | 0.4396 (4) | 1.5944 (4) | 0.0797 (10) | |
H12 | 0.1683 | 0.4923 | 1.6563 | 0.096* | |
C13 | 0.16764 (11) | 0.3486 (4) | 1.4955 (4) | 0.0809 (10) | |
H13 | 0.1380 | 0.3393 | 1.4904 | 0.097* | |
C14 | 0.19339 (11) | 0.2709 (4) | 1.4037 (4) | 0.0770 (9) | |
H14 | 0.1812 | 0.2091 | 1.3364 | 0.092* | |
C15 | 0.23731 (10) | 0.2848 (3) | 1.4116 (3) | 0.0643 (8) | |
H15 | 0.2546 | 0.2323 | 1.3493 | 0.077* | |
C16 | 0.39056 (9) | 0.2607 (3) | 1.5808 (3) | 0.0559 (7) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0720 (5) | 0.1253 (8) | 0.0759 (6) | 0.0063 (5) | 0.0188 (5) | −0.0007 (5) |
O1 | 0.0793 (14) | 0.0887 (16) | 0.0725 (14) | 0.0126 (12) | −0.0085 (12) | −0.0260 (12) |
N1 | 0.0627 (15) | 0.0749 (18) | 0.0712 (18) | 0.0033 (13) | −0.0059 (14) | 0.0092 (14) |
C1 | 0.0579 (16) | 0.0528 (17) | 0.070 (2) | −0.0036 (14) | 0.0068 (16) | 0.0033 (14) |
C2 | 0.0604 (17) | 0.0644 (18) | 0.072 (2) | 0.0008 (16) | 0.0029 (17) | −0.0078 (16) |
C3 | 0.0445 (15) | 0.085 (2) | 0.0606 (19) | 0.0018 (15) | −0.0017 (15) | 0.0050 (16) |
C4 | 0.0598 (17) | 0.072 (2) | 0.080 (2) | −0.0025 (16) | 0.0099 (17) | 0.0201 (17) |
C5 | 0.0653 (17) | 0.0531 (17) | 0.078 (2) | 0.0058 (15) | 0.0081 (17) | 0.0083 (15) |
C6 | 0.0490 (14) | 0.0547 (16) | 0.0548 (17) | −0.0010 (13) | −0.0030 (14) | 0.0053 (13) |
C7 | 0.0593 (15) | 0.0486 (15) | 0.0545 (17) | 0.0003 (13) | −0.0022 (15) | 0.0026 (13) |
C8 | 0.0568 (15) | 0.0628 (18) | 0.0488 (16) | 0.0107 (14) | −0.0024 (14) | 0.0000 (13) |
C9 | 0.0695 (18) | 0.0541 (16) | 0.0502 (17) | 0.0128 (15) | −0.0010 (15) | 0.0031 (14) |
C10 | 0.0630 (16) | 0.0529 (16) | 0.0465 (15) | 0.0143 (14) | 0.0030 (14) | 0.0079 (13) |
C11 | 0.077 (2) | 0.068 (2) | 0.065 (2) | 0.0228 (17) | 0.0037 (17) | −0.0005 (15) |
C12 | 0.078 (2) | 0.088 (3) | 0.073 (2) | 0.028 (2) | 0.0169 (19) | 0.0067 (19) |
C13 | 0.0607 (18) | 0.098 (3) | 0.084 (2) | 0.014 (2) | 0.0059 (19) | 0.020 (2) |
C14 | 0.069 (2) | 0.095 (3) | 0.068 (2) | −0.0010 (19) | −0.0033 (18) | −0.0019 (18) |
C15 | 0.0646 (18) | 0.075 (2) | 0.0536 (18) | 0.0085 (16) | 0.0027 (16) | −0.0027 (15) |
C16 | 0.0499 (15) | 0.0567 (17) | 0.061 (2) | −0.0012 (13) | −0.0040 (15) | −0.0023 (15) |
Cl1—C3 | 1.734 (3) | C7—C16 | 1.474 (4) |
O1—C9 | 1.216 (3) | C8—H8A | 0.9700 |
N1—C16 | 1.134 (4) | C8—H8B | 0.9700 |
C1—H1 | 0.9300 | C8—C9 | 1.512 (4) |
C1—C2 | 1.385 (4) | C9—C10 | 1.489 (4) |
C1—C6 | 1.382 (4) | C10—C11 | 1.383 (4) |
C2—H2 | 0.9300 | C10—C15 | 1.379 (4) |
C2—C3 | 1.369 (4) | C11—H11 | 0.9300 |
C3—C4 | 1.379 (4) | C11—C12 | 1.378 (4) |
C4—H4 | 0.9300 | C12—H12 | 0.9300 |
C4—C5 | 1.379 (4) | C12—C13 | 1.368 (5) |
C5—H5 | 0.9300 | C13—H13 | 0.9300 |
C5—C6 | 1.376 (4) | C13—C14 | 1.378 (4) |
C6—C7 | 1.518 (4) | C14—H14 | 0.9300 |
C7—H7 | 0.9800 | C14—C15 | 1.380 (5) |
C7—C8 | 1.533 (4) | C15—H15 | 0.9300 |
C2—C1—H1 | 119.5 | H8A—C8—H8B | 107.9 |
C6—C1—H1 | 119.5 | C9—C8—C7 | 112.4 (2) |
C6—C1—C2 | 120.9 (3) | C9—C8—H8A | 109.1 |
C1—C2—H2 | 120.2 | C9—C8—H8B | 109.1 |
C3—C2—C1 | 119.6 (3) | O1—C9—C8 | 119.8 (3) |
C3—C2—H2 | 120.2 | O1—C9—C10 | 120.4 (3) |
C2—C3—Cl1 | 120.4 (3) | C10—C9—C8 | 119.8 (2) |
C2—C3—C4 | 120.3 (3) | C11—C10—C9 | 118.7 (3) |
C4—C3—Cl1 | 119.3 (2) | C15—C10—C9 | 122.9 (3) |
C3—C4—H4 | 120.2 | C15—C10—C11 | 118.4 (3) |
C5—C4—C3 | 119.6 (3) | C10—C11—H11 | 119.5 |
C5—C4—H4 | 120.2 | C12—C11—C10 | 121.1 (3) |
C4—C5—H5 | 119.5 | C12—C11—H11 | 119.5 |
C6—C5—C4 | 121.1 (3) | C11—C12—H12 | 120.1 |
C6—C5—H5 | 119.5 | C13—C12—C11 | 119.8 (3) |
C1—C6—C7 | 122.0 (2) | C13—C12—H12 | 120.1 |
C5—C6—C1 | 118.5 (3) | C12—C13—H13 | 120.0 |
C5—C6—C7 | 119.5 (3) | C12—C13—C14 | 120.0 (3) |
C6—C7—H7 | 107.4 | C14—C13—H13 | 120.0 |
C6—C7—C8 | 112.8 (2) | C13—C14—H14 | 120.0 |
C8—C7—H7 | 107.4 | C13—C14—C15 | 119.9 (3) |
C16—C7—C6 | 111.8 (2) | C15—C14—H14 | 120.0 |
C16—C7—H7 | 107.4 | C10—C15—C14 | 120.8 (3) |
C16—C7—C8 | 109.7 (2) | C10—C15—H15 | 119.6 |
C7—C8—H8A | 109.1 | C14—C15—H15 | 119.6 |
C7—C8—H8B | 109.1 | N1—C16—C7 | 178.9 (3) |
Cl1—C3—C4—C5 | 179.0 (2) | C6—C1—C2—C3 | −0.4 (4) |
O1—C9—C10—C11 | 7.2 (4) | C6—C7—C8—C9 | −166.1 (2) |
O1—C9—C10—C15 | −172.7 (3) | C7—C8—C9—O1 | 4.4 (4) |
C1—C2—C3—Cl1 | −179.0 (2) | C7—C8—C9—C10 | −175.9 (2) |
C1—C2—C3—C4 | 1.8 (4) | C8—C9—C10—C11 | −172.5 (2) |
C1—C6—C7—C8 | −75.1 (3) | C8—C9—C10—C15 | 7.6 (4) |
C1—C6—C7—C16 | 49.1 (3) | C9—C10—C11—C12 | −179.6 (3) |
C2—C1—C6—C5 | −1.0 (4) | C9—C10—C15—C14 | 179.6 (3) |
C2—C1—C6—C7 | 177.1 (3) | C10—C11—C12—C13 | −0.1 (5) |
C2—C3—C4—C5 | −1.8 (4) | C11—C10—C15—C14 | −0.3 (4) |
C3—C4—C5—C6 | 0.4 (4) | C11—C12—C13—C14 | −0.1 (5) |
C4—C5—C6—C1 | 1.0 (4) | C12—C13—C14—C15 | 0.1 (5) |
C4—C5—C6—C7 | −177.2 (2) | C13—C14—C15—C10 | 0.1 (5) |
C5—C6—C7—C8 | 103.0 (3) | C15—C10—C11—C12 | 0.3 (4) |
C5—C6—C7—C16 | −132.8 (3) | C16—C7—C8—C9 | 68.5 (3) |
Experimental details
Crystal data | |
Chemical formula | C16H12ClNO |
Mr | 269.72 |
Crystal system, space group | Orthorhombic, Pbcn |
Temperature (K) | 293 |
a, b, c (Å) | 31.247 (13), 9.1889 (10), 9.3719 (12) |
V (Å3) | 2690.9 (12) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.27 |
Crystal size (mm) | 0.44 × 0.39 × 0.37 |
Data collection | |
Diffractometer | Agilent SuperNova (Dual, Cu at zero, Eos) diffractometer |
Absorption correction | Multi-scan (CrysAlis PRO; Agilent, 2013) |
Tmin, Tmax | 0.584, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6683, 2642, 1605 |
Rint | 0.044 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.056, 0.145, 1.08 |
No. of reflections | 2642 |
No. of parameters | 172 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.14, −0.23 |
Computer programs: CrysAlis PRO (Agilent, 2013), SHELXS2013 (Sheldrick, 2008), SHELXL2013 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008), OLEX2 (Dolomanov et al., 2009).
Nitriles usually exhibit important biological and pharmacological activity. For instance, many nitrile-containing pharmaceuticals are widely used in clinical treatments (Fleming et al., 2010). In addition, nitrile derivatives are essential synthetic intermediates in organic synthesis because of their easy achievements and versatile transformations (e.g. Li et al., 2012; Lin et al., 2012; Yang, Shen & Chen, 2010; Yang, Wu & Chen, 2010). The title compound exhibits a V-shaped configuration (Fig. 1), previously observed in related structures (Yang et al., 2011; Abdel-Aziz et al., 2012a, 2012b). One molecule interpenetrates with other symmetry-related molecules in the crystal, to generate a two-dimensional roof-like crystal structure (Fig. 2). Finally, the roof-like structures pack to be the stable crystal structure.