







Supporting information
![]() | Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536809036940/bt5048sup1.cif |
![]() | Structure factor file (CIF format) https://doi.org/10.1107/S1600536809036940/bt5048Isup2.hkl |
CCDC reference: 750777
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean
(C-C) = 0.005 Å
- R factor = 0.045
- wR factor = 0.110
- Data-to-parameter ratio = 15.9
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT222_ALERT_3_C Large Non-Solvent H Ueq(max)/Ueq(min) ... 3.90 Ratio PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C14A PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C14B PLAT911_ALERT_3_C Missing # FCF Refl Between THmin & STh/L= 0.600 4 PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 1 C12 H12 Cl2 N2 O2 PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 3 H2 O PLAT912_ALERT_4_C Missing # of FCF Reflections Above STh/L= 0.600 9
Alert level G REFLT03_ALERT_4_G Please check that the estimate of the number of Friedel pairs is correct. If it is not, please give the correct count in the _publ_section_exptl_refinement section of the submitted CIF. From the CIF: _diffrn_reflns_theta_max 26.48 From the CIF: _reflns_number_total 5599 Count of symmetry unique reflns 2913 Completeness (_total/calc) 192.21% TEST3: Check Friedels for noncentro structure Estimate of Friedel pairs measured 2686 Fraction of Friedel pairs measured 0.922 Are heavy atom types Z>Si present yes PLAT917_ALERT_2_G The FCF is likely NOT based on a BASF/TWIN Flack ! PLAT199_ALERT_1_G Check the Reported _cell_measurement_temperature 293 K PLAT200_ALERT_1_G Check the Reported _diffrn_ambient_temperature 293 K PLAT791_ALERT_4_G The Model has Chirality at C4A (Verify) .... R PLAT791_ALERT_4_G The Model has Chirality at C4B (Verify) .... R
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 7 ALERT level C = Check and explain 6 ALERT level G = General alerts; check 2 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 3 ALERT type 2 Indicator that the structure model may be wrong or deficient 2 ALERT type 3 Indicator that the structure quality may be low 6 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
To a solution of tetrahydro-4-methyl-1,5-benzodiazepin-2-one (0.88 g) in anhydrous benzene (50 ml) was added triethylamine (2.8 ml) and dichloroacetyl chloride (1.90 ml). The contents were allowed to reflux on a water bath for 6hrs. The reaction mixture was washed with sodium bicarbonate solution (10%), water and dried. Evaporation of the solvent results a crude mass and further crystallization from ethanol gives colorless crystals (Venkatraj et al., 2008).
The Nitrogen and Oxygen H atoms were refined and the other H atoms positioned geometrically (C—H=0.93–0.98 Å) and allowed to ride on their parent atoms, with 1.5Ueq(C) for methyl H and 1.2 Ueq(C) for other H atoms.
Data collection: APEX2 (Bruker, 2004); cell refinement: SAINT (Bruker, 2004); data reduction: SAINT (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).
C12H12Cl2N2O2·0.5H2O | F(000) = 612 |
Mr = 592.29 | Dx = 1.441 Mg m−3 |
Monoclinic, P21 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2yb | Cell parameters from 4629 reflections |
a = 8.5470 (3) Å | θ = 2.3–26.5° |
b = 18.0837 (6) Å | µ = 0.48 mm−1 |
c = 8.8697 (3) Å | T = 293 K |
β = 95.405 (2)° | Block, colourless |
V = 1364.82 (8) Å3 | 0.26 × 0.24 × 0.22 mm |
Z = 2 |
Bruker Kappa APEXII area-detector diffractometer | 5599 independent reflections |
Radiation source: fine-focus sealed tube | 4873 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.022 |
ω and ϕ scans | θmax = 26.5°, θmin = 2.3° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2001) | h = −10→10 |
Tmin = 0.884, Tmax = 0.901 | k = −22→22 |
14191 measured reflections | l = −11→10 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.045 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.110 | w = 1/[σ2(Fo2) + (0.0438P)2 + 0.7028P] where P = (Fo2 + 2Fc2)/3 |
S = 1.04 | (Δ/σ)max = 0.006 |
5599 reflections | Δρmax = 0.46 e Å−3 |
352 parameters | Δρmin = −0.62 e Å−3 |
1 restraint | Absolute structure: Flack (1983),2698 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.06 (6) |
C12H12Cl2N2O2·0.5H2O | V = 1364.82 (8) Å3 |
Mr = 592.29 | Z = 2 |
Monoclinic, P21 | Mo Kα radiation |
a = 8.5470 (3) Å | µ = 0.48 mm−1 |
b = 18.0837 (6) Å | T = 293 K |
c = 8.8697 (3) Å | 0.26 × 0.24 × 0.22 mm |
β = 95.405 (2)° |
Bruker Kappa APEXII area-detector diffractometer | 5599 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2001) | 4873 reflections with I > 2σ(I) |
Tmin = 0.884, Tmax = 0.901 | Rint = 0.022 |
14191 measured reflections |
R[F2 > 2σ(F2)] = 0.045 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.110 | Δρmax = 0.46 e Å−3 |
S = 1.04 | Δρmin = −0.62 e Å−3 |
5599 reflections | Absolute structure: Flack (1983),2698 Friedel pairs |
352 parameters | Absolute structure parameter: 0.06 (6) |
1 restraint |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1A | 1.62028 (16) | −0.29670 (7) | 1.77856 (13) | 0.0941 (4) | |
Cl1B | 1.04826 (15) | 0.13662 (6) | 0.96558 (15) | 0.0906 (4) | |
Cl2A | 1.48485 (16) | −0.15064 (6) | 1.74118 (13) | 0.0858 (3) | |
Cl2B | 0.8172 (2) | 0.15716 (9) | 1.17529 (14) | 0.1300 (7) | |
O1A | 1.5519 (3) | −0.46993 (14) | 1.2925 (3) | 0.0594 (6) | |
O1B | 1.0719 (3) | −0.07368 (15) | 0.6539 (2) | 0.0573 (6) | |
O2A | 1.6504 (3) | −0.20942 (14) | 1.4809 (3) | 0.0635 (7) | |
O2B | 0.7429 (3) | 0.02505 (17) | 1.0049 (4) | 0.0852 (9) | |
O3 | 1.2224 (4) | −0.56267 (15) | 1.5161 (4) | 0.0677 (7) | |
H1W | 1.279 (6) | −0.601 (3) | 1.502 (6) | 0.108 (19)* | |
H2W | 1.140 (5) | −0.570 (2) | 1.467 (4) | 0.059 (11)* | |
N1A | 1.3405 (3) | −0.42583 (13) | 1.3919 (3) | 0.0403 (5) | |
H1A | 1.325 (4) | −0.469 (2) | 1.432 (4) | 0.057 (10)* | |
N1B | 1.2097 (3) | −0.03383 (14) | 0.8658 (3) | 0.0399 (5) | |
H1B | 1.261 (3) | −0.0095 (17) | 0.811 (3) | 0.031 (7)* | |
C2A | 1.4518 (3) | −0.42199 (16) | 1.2939 (3) | 0.0420 (6) | |
C2B | 1.1026 (3) | −0.07798 (16) | 0.7907 (3) | 0.0410 (6) | |
C3A | 1.4398 (4) | −0.35821 (17) | 1.1848 (3) | 0.0462 (7) | |
H3A | 1.3314 | −0.3539 | 1.1423 | 0.055* | |
H3B | 1.5028 | −0.3694 | 1.1023 | 0.055* | |
C3B | 1.0275 (4) | −0.13513 (16) | 0.8847 (3) | 0.0465 (7) | |
H3C | 1.1089 | −0.1594 | 0.9505 | 0.056* | |
H3D | 0.9773 | −0.1723 | 0.8178 | 0.056* | |
C4A | 1.4920 (3) | −0.28414 (16) | 1.2521 (3) | 0.0441 (7) | |
H4A | 1.6071 | −0.2832 | 1.2637 | 0.053* | |
C4B | 0.9057 (4) | −0.10270 (17) | 0.9813 (4) | 0.0490 (7) | |
H4B | 0.8130 | −0.0886 | 0.9140 | 0.059* | |
N5A | 1.4357 (2) | −0.27668 (12) | 1.4044 (2) | 0.0368 (5) | |
N5B | 0.9699 (3) | −0.03578 (14) | 1.0580 (2) | 0.0403 (5) | |
C6A | 1.2763 (3) | −0.29648 (16) | 1.4220 (3) | 0.0355 (5) | |
C6B | 1.1307 (3) | −0.03545 (15) | 1.1206 (3) | 0.0363 (6) | |
C7A | 1.1664 (3) | −0.24204 (17) | 1.4443 (3) | 0.0457 (7) | |
H7A | 1.1961 | −0.1926 | 1.4462 | 0.055* | |
C7B | 1.1690 (4) | −0.03548 (18) | 1.2758 (3) | 0.0485 (7) | |
H7B | 1.0906 | −0.0415 | 1.3407 | 0.058* | |
C8A | 1.0148 (3) | −0.2607 (2) | 1.4635 (4) | 0.0548 (8) | |
H8A | 0.9424 | −0.2242 | 1.4820 | 0.066* | |
C8B | 1.3225 (4) | −0.0267 (2) | 1.3344 (4) | 0.0587 (9) | |
H8B | 1.3482 | −0.0259 | 1.4386 | 0.070* | |
C9A | 0.9695 (3) | −0.3334 (2) | 1.4554 (4) | 0.0530 (8) | |
H9A | 0.8658 | −0.3458 | 1.4675 | 0.064* | |
C9B | 1.4383 (4) | −0.01891 (19) | 1.2369 (4) | 0.0571 (9) | |
H9B | 1.5418 | −0.0109 | 1.2758 | 0.069* | |
C10A | 1.0749 (3) | −0.38800 (17) | 1.4298 (4) | 0.0467 (7) | |
H10A | 1.0422 | −0.4370 | 1.4237 | 0.056* | |
C10B | 1.4017 (3) | −0.02294 (17) | 1.0826 (4) | 0.0461 (7) | |
H10B | 1.4812 | −0.0194 | 1.0182 | 0.055* | |
C11A | 1.2304 (3) | −0.37036 (15) | 1.4130 (3) | 0.0353 (5) | |
C11B | 1.2482 (3) | −0.03216 (15) | 1.0231 (3) | 0.0363 (5) | |
C12A | 1.4358 (6) | −0.2213 (2) | 1.1517 (4) | 0.0707 (11) | |
H12A | 1.3230 | −0.2210 | 1.1396 | 0.106* | |
H12B | 1.4751 | −0.2271 | 1.0544 | 0.106* | |
H12C | 1.4733 | −0.1755 | 1.1964 | 0.106* | |
C12B | 0.8546 (5) | −0.1577 (3) | 1.0958 (5) | 0.0806 (12) | |
H12D | 0.9429 | −0.1705 | 1.1660 | 0.121* | |
H12E | 0.8147 | −0.2015 | 1.0443 | 0.121* | |
H12F | 0.7738 | −0.1361 | 1.1498 | 0.121* | |
C13A | 1.5282 (3) | −0.23943 (16) | 1.5082 (3) | 0.0425 (6) | |
C13B | 0.8785 (3) | 0.02480 (19) | 1.0567 (3) | 0.0483 (7) | |
C14A | 1.4827 (4) | −0.2412 (2) | 1.6705 (3) | 0.0516 (7) | |
H14A | 1.3773 | −0.2624 | 1.6720 | 0.062* | |
C14B | 0.9587 (5) | 0.0969 (2) | 1.1152 (4) | 0.0651 (10) | |
H14B | 1.0379 | 0.0860 | 1.1995 | 0.078* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1A | 0.1134 (9) | 0.0939 (8) | 0.0740 (7) | 0.0444 (7) | 0.0047 (6) | 0.0100 (6) |
Cl1B | 0.1093 (9) | 0.0570 (6) | 0.1045 (8) | −0.0225 (6) | 0.0047 (7) | 0.0035 (6) |
Cl2A | 0.1158 (9) | 0.0691 (6) | 0.0740 (6) | 0.0202 (6) | 0.0169 (6) | −0.0282 (5) |
Cl2B | 0.1609 (13) | 0.1493 (13) | 0.0748 (7) | 0.1052 (12) | −0.0141 (7) | −0.0412 (8) |
O1A | 0.0640 (14) | 0.0558 (13) | 0.0609 (13) | 0.0228 (12) | 0.0193 (11) | 0.0018 (11) |
O1B | 0.0562 (13) | 0.0768 (16) | 0.0377 (11) | −0.0032 (12) | −0.0020 (9) | −0.0029 (11) |
O2A | 0.0445 (12) | 0.0707 (16) | 0.0778 (16) | −0.0228 (11) | 0.0190 (11) | −0.0222 (13) |
O2B | 0.0332 (12) | 0.087 (2) | 0.133 (3) | 0.0137 (13) | −0.0012 (14) | 0.0200 (19) |
O3 | 0.0578 (16) | 0.0485 (14) | 0.093 (2) | 0.0005 (13) | −0.0113 (15) | 0.0087 (13) |
N1A | 0.0465 (13) | 0.0319 (13) | 0.0435 (13) | 0.0045 (10) | 0.0100 (10) | 0.0037 (10) |
N1B | 0.0367 (12) | 0.0480 (13) | 0.0360 (12) | −0.0030 (11) | 0.0087 (10) | 0.0039 (11) |
C2A | 0.0474 (16) | 0.0378 (15) | 0.0408 (14) | 0.0031 (13) | 0.0035 (12) | −0.0043 (12) |
C2B | 0.0388 (14) | 0.0439 (16) | 0.0400 (15) | 0.0031 (12) | 0.0026 (11) | −0.0056 (12) |
C3A | 0.0575 (18) | 0.0471 (16) | 0.0348 (13) | 0.0020 (14) | 0.0083 (12) | −0.0023 (12) |
C3B | 0.0504 (17) | 0.0371 (15) | 0.0511 (16) | −0.0102 (13) | −0.0010 (13) | −0.0056 (12) |
C4A | 0.0461 (16) | 0.0472 (17) | 0.0404 (14) | −0.0062 (13) | 0.0108 (12) | −0.0014 (13) |
C4B | 0.0382 (15) | 0.0495 (18) | 0.0588 (19) | −0.0087 (13) | 0.0016 (13) | 0.0007 (14) |
N5A | 0.0328 (11) | 0.0392 (12) | 0.0394 (11) | −0.0022 (9) | 0.0082 (9) | −0.0032 (9) |
N5B | 0.0282 (11) | 0.0521 (14) | 0.0409 (12) | 0.0018 (10) | 0.0047 (9) | 0.0010 (11) |
C6A | 0.0277 (12) | 0.0417 (14) | 0.0367 (13) | 0.0022 (11) | 0.0010 (10) | 0.0018 (11) |
C6B | 0.0334 (13) | 0.0375 (13) | 0.0372 (13) | 0.0031 (11) | −0.0004 (10) | 0.0018 (11) |
C7A | 0.0420 (15) | 0.0402 (16) | 0.0552 (17) | 0.0070 (12) | 0.0057 (13) | 0.0037 (13) |
C7B | 0.0540 (17) | 0.0523 (17) | 0.0390 (14) | 0.0062 (14) | 0.0031 (12) | 0.0047 (13) |
C8A | 0.0372 (16) | 0.057 (2) | 0.071 (2) | 0.0182 (14) | 0.0091 (14) | 0.0025 (16) |
C8B | 0.071 (2) | 0.060 (2) | 0.0419 (16) | 0.0053 (18) | −0.0129 (15) | −0.0005 (15) |
C9A | 0.0292 (15) | 0.065 (2) | 0.0648 (19) | −0.0016 (14) | 0.0056 (13) | 0.0010 (17) |
C9B | 0.0434 (17) | 0.057 (2) | 0.066 (2) | −0.0052 (15) | −0.0182 (15) | 0.0001 (16) |
C10A | 0.0376 (15) | 0.0460 (17) | 0.0563 (17) | −0.0072 (12) | 0.0031 (13) | −0.0004 (13) |
C10B | 0.0328 (13) | 0.0472 (17) | 0.0568 (17) | −0.0013 (12) | −0.0033 (12) | 0.0023 (14) |
C11A | 0.0356 (13) | 0.0376 (14) | 0.0326 (12) | −0.0005 (11) | 0.0032 (10) | −0.0005 (11) |
C11B | 0.0342 (13) | 0.0347 (13) | 0.0393 (13) | 0.0007 (11) | 0.0009 (10) | 0.0015 (11) |
C12A | 0.104 (3) | 0.049 (2) | 0.061 (2) | −0.0015 (19) | 0.019 (2) | 0.0172 (17) |
C12B | 0.083 (3) | 0.075 (3) | 0.087 (3) | −0.036 (2) | 0.026 (2) | 0.004 (2) |
C13A | 0.0333 (14) | 0.0402 (15) | 0.0551 (16) | −0.0060 (12) | 0.0107 (12) | −0.0084 (13) |
C13B | 0.0353 (15) | 0.0581 (19) | 0.0525 (17) | 0.0096 (14) | 0.0086 (13) | 0.0103 (15) |
C14A | 0.0420 (15) | 0.064 (2) | 0.0482 (16) | 0.0011 (14) | 0.0015 (12) | −0.0146 (15) |
C14B | 0.073 (2) | 0.064 (2) | 0.0539 (19) | 0.0303 (18) | −0.0134 (17) | −0.0112 (16) |
Cl1A—C14A | 1.759 (3) | N5B—C13B | 1.345 (4) |
Cl1B—C14B | 1.748 (4) | N5B—C6B | 1.432 (3) |
Cl2A—C14A | 1.754 (3) | C6A—C7A | 1.388 (4) |
Cl2B—C14B | 1.748 (4) | C6A—C11A | 1.393 (4) |
O1A—C2A | 1.219 (4) | C6B—C7B | 1.385 (4) |
O1B—C2B | 1.220 (3) | C6B—C11B | 1.387 (4) |
O2A—C13A | 1.221 (3) | C7A—C8A | 1.365 (4) |
O2B—C13B | 1.206 (4) | C7A—H7A | 0.9300 |
O3—H1W | 0.86 (6) | C7B—C8B | 1.374 (5) |
O3—H2W | 0.80 (4) | C7B—H7B | 0.9300 |
N1A—C2A | 1.349 (4) | C8A—C9A | 1.370 (5) |
N1A—C11A | 1.400 (4) | C8A—H8A | 0.9300 |
N1A—H1A | 0.87 (4) | C8B—C9B | 1.381 (5) |
N1B—C2B | 1.343 (4) | C8B—H8B | 0.9300 |
N1B—C11B | 1.403 (3) | C9A—C10A | 1.370 (4) |
N1B—H1B | 0.81 (3) | C9A—H9A | 0.9300 |
C2A—C3A | 1.503 (4) | C9B—C10B | 1.376 (5) |
C2B—C3B | 1.508 (4) | C9B—H9B | 0.9300 |
C3A—C4A | 1.516 (4) | C10A—C11A | 1.389 (4) |
C3A—H3A | 0.9700 | C10A—H10A | 0.9300 |
C3A—H3B | 0.9700 | C10B—C11B | 1.378 (4) |
C3B—C4B | 1.527 (5) | C10B—H10B | 0.9300 |
C3B—H3C | 0.9700 | C12A—H12A | 0.9600 |
C3B—H3D | 0.9700 | C12A—H12B | 0.9600 |
C4A—N5A | 1.482 (3) | C12A—H12C | 0.9600 |
C4A—C12A | 1.495 (5) | C12B—H12D | 0.9600 |
C4A—H4A | 0.9800 | C12B—H12E | 0.9600 |
C4B—N5B | 1.469 (4) | C12B—H12F | 0.9600 |
C4B—C12B | 1.515 (5) | C13A—C14A | 1.526 (4) |
C4B—H4B | 0.9800 | C13B—C14B | 1.540 (5) |
N5A—C13A | 1.338 (4) | C14A—H14A | 0.9800 |
N5A—C6A | 1.431 (3) | C14B—H14B | 0.9800 |
H1W—O3—H2W | 106 (5) | C7A—C8A—C9A | 119.9 (3) |
C2A—N1A—C11A | 125.0 (2) | C7A—C8A—H8A | 120.1 |
C2A—N1A—H1A | 117 (2) | C9A—C8A—H8A | 120.1 |
C11A—N1A—H1A | 117 (2) | C7B—C8B—C9B | 119.4 (3) |
C2B—N1B—C11B | 126.2 (3) | C7B—C8B—H8B | 120.3 |
C2B—N1B—H1B | 114 (2) | C9B—C8B—H8B | 120.3 |
C11B—N1B—H1B | 119 (2) | C10A—C9A—C8A | 120.9 (3) |
O1A—C2A—N1A | 120.5 (3) | C10A—C9A—H9A | 119.6 |
O1A—C2A—C3A | 123.0 (3) | C8A—C9A—H9A | 119.6 |
N1A—C2A—C3A | 116.4 (3) | C10B—C9B—C8B | 120.5 (3) |
O1B—C2B—N1B | 121.9 (3) | C10B—C9B—H9B | 119.7 |
O1B—C2B—C3B | 122.0 (3) | C8B—C9B—H9B | 119.7 |
N1B—C2B—C3B | 116.1 (2) | C9A—C10A—C11A | 120.2 (3) |
C2A—C3A—C4A | 115.1 (2) | C9A—C10A—H10A | 119.9 |
C2A—C3A—H3A | 108.5 | C11A—C10A—H10A | 119.9 |
C4A—C3A—H3A | 108.5 | C9B—C10B—C11B | 120.4 (3) |
C2A—C3A—H3B | 108.5 | C9B—C10B—H10B | 119.8 |
C4A—C3A—H3B | 108.5 | C11B—C10B—H10B | 119.8 |
H3A—C3A—H3B | 107.5 | C10A—C11A—C6A | 118.8 (2) |
C2B—C3B—C4B | 113.3 (2) | C10A—C11A—N1A | 120.8 (3) |
C2B—C3B—H3C | 108.9 | C6A—C11A—N1A | 120.4 (2) |
C4B—C3B—H3C | 108.9 | C10B—C11B—C6B | 119.0 (3) |
C2B—C3B—H3D | 108.9 | C10B—C11B—N1B | 120.6 (3) |
C4B—C3B—H3D | 108.9 | C6B—C11B—N1B | 120.3 (2) |
H3C—C3B—H3D | 107.7 | C4A—C12A—H12A | 109.5 |
N5A—C4A—C12A | 111.1 (3) | C4A—C12A—H12B | 109.5 |
N5A—C4A—C3A | 109.3 (2) | H12A—C12A—H12B | 109.5 |
C12A—C4A—C3A | 111.8 (3) | C4A—C12A—H12C | 109.5 |
N5A—C4A—H4A | 108.2 | H12A—C12A—H12C | 109.5 |
C12A—C4A—H4A | 108.2 | H12B—C12A—H12C | 109.5 |
C3A—C4A—H4A | 108.2 | C4B—C12B—H12D | 109.5 |
N5B—C4B—C12B | 110.4 (3) | C4B—C12B—H12E | 109.5 |
N5B—C4B—C3B | 109.4 (2) | H12D—C12B—H12E | 109.5 |
C12B—C4B—C3B | 112.3 (3) | C4B—C12B—H12F | 109.5 |
N5B—C4B—H4B | 108.2 | H12D—C12B—H12F | 109.5 |
C12B—C4B—H4B | 108.2 | H12E—C12B—H12F | 109.5 |
C3B—C4B—H4B | 108.2 | O2A—C13A—N5A | 123.3 (3) |
C13A—N5A—C6A | 123.9 (2) | O2A—C13A—C14A | 119.7 (3) |
C13A—N5A—C4A | 116.8 (2) | N5A—C13A—C14A | 116.9 (2) |
C6A—N5A—C4A | 118.1 (2) | O2B—C13B—N5B | 122.9 (3) |
C13B—N5B—C6B | 122.4 (3) | O2B—C13B—C14B | 120.4 (3) |
C13B—N5B—C4B | 118.4 (2) | N5B—C13B—C14B | 116.5 (3) |
C6B—N5B—C4B | 119.1 (2) | C13A—C14A—Cl2A | 108.8 (2) |
C7A—C6A—C11A | 119.8 (2) | C13A—C14A—Cl1A | 108.0 (2) |
C7A—C6A—N5A | 120.2 (3) | Cl2A—C14A—Cl1A | 110.73 (17) |
C11A—C6A—N5A | 120.0 (2) | C13A—C14A—H14A | 109.7 |
C7B—C6B—C11B | 120.2 (2) | Cl2A—C14A—H14A | 109.7 |
C7B—C6B—N5B | 120.9 (3) | Cl1A—C14A—H14A | 109.7 |
C11B—C6B—N5B | 118.8 (2) | C13B—C14B—Cl2B | 109.4 (3) |
C8A—C7A—C6A | 120.4 (3) | C13B—C14B—Cl1B | 107.7 (2) |
C8A—C7A—H7A | 119.8 | Cl2B—C14B—Cl1B | 109.9 (2) |
C6A—C7A—H7A | 119.8 | C13B—C14B—H14B | 109.9 |
C8B—C7B—C6B | 120.2 (3) | Cl2B—C14B—H14B | 109.9 |
C8B—C7B—H7B | 119.9 | Cl1B—C14B—H14B | 109.9 |
C6B—C7B—H7B | 119.9 | ||
C11A—N1A—C2A—O1A | 173.3 (3) | C7B—C8B—C9B—C10B | −2.6 (5) |
C11A—N1A—C2A—C3A | −9.3 (4) | C8A—C9A—C10A—C11A | 0.6 (5) |
C11B—N1B—C2B—O1B | 177.0 (3) | C8B—C9B—C10B—C11B | 2.3 (5) |
C11B—N1B—C2B—C3B | −5.4 (4) | C9A—C10A—C11A—C6A | −0.2 (4) |
O1A—C2A—C3A—C4A | −106.8 (3) | C9A—C10A—C11A—N1A | 177.8 (3) |
N1A—C2A—C3A—C4A | 75.9 (3) | C7A—C6A—C11A—C10A | −1.4 (4) |
O1B—C2B—C3B—C4B | −107.2 (3) | N5A—C6A—C11A—C10A | −179.7 (2) |
N1B—C2B—C3B—C4B | 75.2 (3) | C7A—C6A—C11A—N1A | −179.4 (2) |
C2A—C3A—C4A—N5A | −40.6 (4) | N5A—C6A—C11A—N1A | 2.2 (4) |
C2A—C3A—C4A—C12A | −164.0 (3) | C2A—N1A—C11A—C10A | 138.6 (3) |
C2B—C3B—C4B—N5B | −46.2 (3) | C2A—N1A—C11A—C6A | −43.4 (4) |
C2B—C3B—C4B—C12B | −169.2 (3) | C9B—C10B—C11B—C6B | 1.6 (4) |
C12A—C4A—N5A—C13A | −90.1 (3) | C9B—C10B—C11B—N1B | 177.9 (3) |
C3A—C4A—N5A—C13A | 146.1 (3) | C7B—C6B—C11B—C10B | −5.2 (4) |
C12A—C4A—N5A—C6A | 78.1 (3) | N5B—C6B—C11B—C10B | 172.3 (3) |
C3A—C4A—N5A—C6A | −45.7 (3) | C7B—C6B—C11B—N1B | 178.5 (3) |
C12B—C4B—N5B—C13B | −102.0 (3) | N5B—C6B—C11B—N1B | −3.9 (4) |
C3B—C4B—N5B—C13B | 134.0 (3) | C2B—N1B—C11B—C10B | 141.2 (3) |
C12B—C4B—N5B—C6B | 83.0 (3) | C2B—N1B—C11B—C6B | −42.6 (4) |
C3B—C4B—N5B—C6B | −41.1 (3) | C6A—N5A—C13A—O2A | −164.1 (3) |
C13A—N5A—C6A—C7A | 58.9 (4) | C4A—N5A—C13A—O2A | 3.3 (4) |
C4A—N5A—C6A—C7A | −108.3 (3) | C6A—N5A—C13A—C14A | 21.3 (4) |
C13A—N5A—C6A—C11A | −122.8 (3) | C4A—N5A—C13A—C14A | −171.3 (3) |
C4A—N5A—C6A—C11A | 70.0 (3) | C6B—N5B—C13B—O2B | −179.7 (3) |
C13B—N5B—C6B—C7B | 75.4 (4) | C4B—N5B—C13B—O2B | 5.4 (4) |
C4B—N5B—C6B—C7B | −109.8 (3) | C6B—N5B—C13B—C14B | 4.5 (4) |
C13B—N5B—C6B—C11B | −102.1 (3) | C4B—N5B—C13B—C14B | −170.4 (3) |
C4B—N5B—C6B—C11B | 72.7 (3) | O2A—C13A—C14A—Cl2A | 53.9 (3) |
C11A—C6A—C7A—C8A | 2.6 (4) | N5A—C13A—C14A—Cl2A | −131.2 (2) |
N5A—C6A—C7A—C8A | −179.0 (3) | O2A—C13A—C14A—Cl1A | −66.3 (3) |
C11B—C6B—C7B—C8B | 4.9 (5) | N5A—C13A—C14A—Cl1A | 108.5 (3) |
N5B—C6B—C7B—C8B | −172.6 (3) | O2B—C13B—C14B—Cl2B | 27.4 (4) |
C6A—C7A—C8A—C9A | −2.3 (5) | N5B—C13B—C14B—Cl2B | −156.7 (2) |
C6B—C7B—C8B—C9B | −1.0 (5) | O2B—C13B—C14B—Cl1B | −92.0 (3) |
C7A—C8A—C9A—C10A | 0.7 (5) | N5B—C13B—C14B—Cl1B | 84.0 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
C4A—H4A···O2A | 0.98 | 2.34 | 2.694 (4) | 100 |
C4B—H4B···O2B | 0.98 | 2.31 | 2.715 (4) | 104 |
N1A—H1A···O3 | 0.87 (4) | 2.08 (4) | 2.927 (4) | 164 (3) |
O3—H2W···O1Bi | 0.80 (4) | 2.02 (4) | 2.815 (4) | 173 (4) |
C3A—H3A···O2Bi | 0.97 | 2.60 | 3.038 (4) | 108 |
C8A—H8A···O2Aii | 0.93 | 2.51 | 3.268 (4) | 139 |
C10B—H10B···O2Biii | 0.93 | 2.39 | 3.179 (4) | 143 |
Symmetry codes: (i) −x+2, y−1/2, −z+2; (ii) x−1, y, z; (iii) x+1, y, z. |
Experimental details
Crystal data | |
Chemical formula | C12H12Cl2N2O2·0.5H2O |
Mr | 592.29 |
Crystal system, space group | Monoclinic, P21 |
Temperature (K) | 293 |
a, b, c (Å) | 8.5470 (3), 18.0837 (6), 8.8697 (3) |
β (°) | 95.405 (2) |
V (Å3) | 1364.82 (8) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.48 |
Crystal size (mm) | 0.26 × 0.24 × 0.22 |
Data collection | |
Diffractometer | Bruker Kappa APEXII area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2001) |
Tmin, Tmax | 0.884, 0.901 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 14191, 5599, 4873 |
Rint | 0.022 |
(sin θ/λ)max (Å−1) | 0.627 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.045, 0.110, 1.04 |
No. of reflections | 5599 |
No. of parameters | 352 |
No. of restraints | 1 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.46, −0.62 |
Absolute structure | Flack (1983),2698 Friedel pairs |
Absolute structure parameter | 0.06 (6) |
Computer programs: APEX2 (Bruker, 2004), SAINT (Bruker, 2004), SHELXS97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997), SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
C4A—H4A···O2A | 0.98 | 2.34 | 2.694 (4) | 100.1 |
C4B—H4B···O2B | 0.98 | 2.31 | 2.715 (4) | 104.0 |
N1A—H1A···O3 | 0.87 (4) | 2.08 (4) | 2.927 (4) | 164 (3) |
O3—H2W···O1Bi | 0.80 (4) | 2.02 (4) | 2.815 (4) | 173 (4) |
C3A—H3A···O2Bi | 0.97 | 2.60 | 3.038 (4) | 107.9 |
C8A—H8A···O2Aii | 0.93 | 2.51 | 3.268 (4) | 138.8 |
C10B—H10B···O2Biii | 0.93 | 2.39 | 3.179 (4) | 142.6 |
Symmetry codes: (i) −x+2, y−1/2, −z+2; (ii) x−1, y, z; (iii) x+1, y, z. |
The anticonvulsant activity of benzodiazepines has been utilized clinically in patients to treat specific seizure types or conditions, i.e., akinetic, myoclonic, absence variant seizures as well as to help terminate status epilepticusor serial seizures (MacDonald, 2002). Benzodiazepines are used for the purpose of hypnotic effects, owing to their less toxic and less severe withdrawal effects when compared with barbiturates (Gringauz, 1999). Benzodiazepines from aspergillus include asperlicin, which is used for treatment of gastrointestinal and central nervous system (CNS) disorders (Rahbaek et al.,1999). The other therapeutic applications (Lee et al., 1999) of benzodiazepines include vasopressin antagonists (Albright et al., 1998). In view of these importance and to ascertain the molecular conformation, crystallographic study of the title compound has been carried out.
The ORTEP diagram of the title compound is shown in Fig.1. There are two crystallographically independent molecules in the asymmetric unit. The benzodiazepine rings in the two molecules adopt a distorted boat conformation. The puckering parameters (Cremer & Pople, 1975) and the asymmetry parameters (Nardelli, 1983) for the ring in molecule A are: q2 = 0.959 (3) Å, q3 = 0.150 (3) Å, ϕ2 = 136.1 (2)°, ϕ3 = 359.8 (1)° and Δ2(C4A)= 8.1 (3)°; for the ring in molecule B are: q2 = 0.962 (3) Å, q3 = 0.168 (3) Å, ϕ2 = 141.4 (2)°, ϕ3 = 5.3 (1)° and Δ2(C4B)= 3.4 (3)°. The sum of the bond angles at N1A(359.0°), N1B(359.2), N5A(358.8) and N5B(359.9°) of the benzodiazepine rings in both the molecules are in accordance with sp2 hybridization.
The crystal packing is controlled by N—H···O, C—H···O and O—H···O types of intermolecular interactions in addition to van der Waals forces. The water molecule connects the molecules A and B through N1A—H1A···O3 and O3—H2W···O1B hydrogen bonds. Thus the combination of N1A—H1A···O3, O3—H2W···O1B and C3A—H3A···O2B hydrogen bonds form a graph set motif of R33(14) dimer (Bernstein et al., 1995) which stabilize the molecules. Atom C8A at (x, y, z) donates a proton to O2A (x - 1, y, z), which forms a C7 one dimensional chain running along a–axis. The intermolecular hydrogen bond C10B—H10B···O2B also connects the molecule into an another C7 chain running along b–axis (Fig. 2).