Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S2053229616002849/fm3039sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S2053229616002849/fm3039Isup2.hkl | |
Chemical Markup Language (CML) file https://doi.org/10.1107/S2053229616002849/fm3039Isup3.cml |
CCDC reference: 1454018
Alkanolamines, such as monoethanolamine, diethanolamine, methyldiethanolamine and 2-amino-2-methylpropan-1-ol, have been known for their high CO2 absorption for over 60 years (Yang et al., 2008). They are used widely in the natural gas industry for industrial applications in CO2 reversible capture from natural gas extraction and gas refinery (Barzagli et al., 2012). In an attempt to crystallize a salt of (RS)-2-(3-benzoylphenyl)propionic acid with 2-amino-2-methylpropan-1-ol, we obtained instead a polymorph (denoted polymorph II) of bis(1-hydroxy-2-methylpropan-2-aminium) carbonate, (I), suggesting that the amine group of the former compound captured CO2 from the atmosphere forming the aminium carbonate salt. In 2012, a previous polymorph (denoted polymorph I) was crystallized in the triclinic system (Barzagli et al., 2012).
A solution of 2-amino-2-methylpropan-1-ol (0.2 ml, 2 mmol) in acetonitrile (0.5 ml) was added to a solution of 2-(3-benzoylphenyl)propionic acid (32 mg, 0.125 mmol) in acetonitrile (0.5 ml). Colourless crystals of bis(1-hydroxy-2-methylpropan-2-aminium) carbonate, (I), suitable for X-ray diffraction analysis were obtained after 4 d by slow evaporation of the solution at room temperature.
Crystal data, data collection and structure refinement details are summarized in Table 1. H atoms bonded to O and N atoms were observed in the difference Fourier synthesis. They were placed at the observed positions and allowed to refine freely with an isotropic displacement parameter. The remaining H atoms were positioned geometrically and allowed to ride on their respective parent atoms, with C—H = 0.98 Å and Uiso(H) = 1.5Ueq(C) for methyl H atoms, and C—H = 0.99 Å and Uiso(H) = 1.2Ueq(C) for methylene H atoms.
The asymmetric unit of polymorph II of the title salt, (I), contains one 1-hydroxy-2-methylpropan-2-aminium cation and half a carbonate anion located on a twofold axis (Fig. 1). The formula unit '2(C4H12NO)·CO3' contains ten hydrogen-bond donors for only five hydrogen-bond acceptors. Whereas all donors belong to the cations, three of five acceptors are found in the anion and the remaining two in the cations. In the crystal structure of polymorph II, the cation is bonded, via four hydrogen bonds, to three anions. Two anions are linked to the cation by a single N—H···O hydrogen bond, while the third is connected to the cation by one N—H···O and one O—H···O hydrogen bond. The carbonate anion is linked to six cations through eight hydrogen bonds. It is connected to four cations through single N—H···O hydrogen bonds and to the two other cations via both O—H···O and N—H···O hydrogen bonds, forming neutral layers of alternated cation–anion–cation planes which are parallel to the ab plane (Fig. 2). These layers, located at z = 1/4 and 3/4, interact through van der Waals interactions and C—H···O hydrogen bonds, leading to an infinite three-dimensional network (Fig. 3 and Table 2).
The asymmetric unit of polymorph I (Barzagli et al., 2012) of (I) contains two 1-hydroxy-2-methylpropan-2-aminium cations and one carbonate anion. The formula unit contains eight hydrogen-bond donors in two cations for only four hydrogen-bond acceptors, i.e. three in the anion and one in one cation. Accordingly, the two independent cations are fundamentally distinct from one another in terms of their hydrogen-bond interactions. The first cation is bonded to three anions and one cation, linked to two of the three anions by N—H···O hydrogen bonds and to the third by one O—H···O hydrogen bond, and linked to another equivalent cation through inversion centre symmetry by two N—H···O hydrogen bonds. Similar to polymorph II, the second cation in polymorph I is bonded to three anions, linked to two by single N—H···O hydrogen bonds and to the third by N—H···O and O—H···O hydrogen bonds. In the crystal structure of polymorph I, the carbonate anion is also surrounded by six cations, linked to four through N—H···O hydrogen bonds and to a fifth by two hydrogen bonds (N—H···O and O—H···O), similar to polymorph II. The main difference with polymorph II is seen in the link to the sixth cation via only an O—H···O hydrogen bond in polymorph I. All these hydrogen bonds connect anions and cations to form neutral layers of a alternating cation–anion–cation structure, here parallel to the (011) plane (Fig. 2). These layers are interconnected through van der Waals interactions and C—H···O contacts (Fig. 3). The formation of the hydrogen-bonded cation–anion–cation structure in both polymorphs I and II can be regarded as a consequence of the 2:1 cation–anion ratio and the higher concentration of hydrogen-bond donors relative to hydrogen-bond acceptors in their crystal structures.
In the crystal structures of polymorphs I and II, the centroids of the cations form edge-sharing octahedra around the anions. These octahedra, which are oriented in a similar manner in both polymorphs, form similar layers (Figs. 4 and 5), as outlined before. In polymorph II, the six centroid-to-centroid distances between the anion and the cations of each octahedron range from 4.101 to 4.738 Å. In polymorph I, five centroid-to-centroid distances vary from 4.007 to 4.651 Å, corresponding to anion–cation hydrogen-bonding interactions similar to those present in polymorph II. The sixth centroid-to-centroid distance, equal to 5.602 Å, is the longest and corresponds to a different relative orientation between the sixth cation and the central anion with respect to that found in polymorph II. This is propably the source of the greatest deformation of the octahedra in polymorph I compared with those of the polymorph II (Figs. 4 and 5), as observed by the angles formed between the centroid of the central anion and those of the cations in trans positions with respect to the anion (156.05, 166.99 and 168.7° for polymorph I, compared with 170.47 and 173.80° for polymorph II). In both polymorphs, each layer comprises one plane formed by the centroids of the anions (anionic plane), which is located between two planes formed by the centroids of the cations (cationic planes) (Fig. 6). In polymorph II, the layer thickness (4.918 Å) is larger than that of polymorph I (4.216 Å) (Fig. 6). In addition, the interlayer distance in polymorph II (4.327 Å) is greater than in polymorph I (3.969 Å), while the surface occupied by one '2(C4H12NO)·CO3' formula unit in the layers of the former (33.5 Å2) is smaller than in those of the latter (39.3 Å2) (Figs. 4 and 5). As a consequence, the layers in polymorph II are denser and more distant with respect to each other than those in polymorph I, leading to a crystalline density difference of 4.5% between the two polymorphs (1.287 Mg m−3 at 100 K for polymorph II and 1.232 Mg m−3 at 173 K for polymorph I).
In order to estimate the relative stability of the two polymorphs, periodic theoretical calculations at the Density Functional level of Theory (DFT) have been performed on both structures. The geometry optimizations (unit-cell parameters and atomic positions) of these two crystal phases leading to energy minima were achieved using the B3LYP hybrid exchange/correlation functional with the 6–31G** basis set (Vosko et al., 1980; Becke, 1993) and the CRYSTAL14 program (Dovesi et al., 2014). Using dispersion corrections (Grimme, 2006), the two polymorphs were observed to have almost the same stability [ΔE(II–I) = −0.2 kJ mol−1 per '2(C4H12NO)·CO3' formula unit, in line with their close structural similarity. The unit-cell volume of each polymorph decreases after geometry optimizations; this decrease is more important in polymorph I, whose structure was determined at higher temperature (T = 173 K) than in polymorph II (T = 100 K).
In polymorph II, the bonding angles of the carbonate anion [119.62 (11) and 120.8 (2)°] are very close to the formal value of 120°. The O2—C5 bond length [1.2934 (17) Å] is slightly longer than the O3—C5 bond length [1.283 (3) Å]. This is probably due to the fact that the O2 atom is an acceptor of three hydrogen bonds, two involving the NH3+ ammonium group of the organic cation (N1—H2···O2 and N1—H3···O2) and one involving the hydroxy group (O1—H1···O2), while the O3 atom is an acceptor of two N1—H4···O3 hydrogen bonds (Table 2).
A correlation between observed C—O bond lengths and the number of classical hydrogen bonds which are accepted by the O atom is also observed in polymorph I. The O3—C9 bond length [1.298 (1) Å] is longer than the O4—C9 [1.274 (1) Å] and O5—C9 [1.275 (1) Å] bond lengths. This is probably due to the fact that the O3 atom is an acceptor of three hydrogen bonds, two involving the NH3+ ammonium group of the organic cation (N2—H23N···O3 and N1—H11N···O3) and one involving the hydroxy group (O2—H2···O3), while the O4 and O5 atoms are acceptors of only two hydrogen bonds each (N2—H22N···O4 and N2—H21N···O4, and N1—H13···O5 and O1—H1···O5).
Comparing the intralayer interactions of the two polymorphs, we note that the N—H···O hydrogen-bond lengths are comparable. Indeed, for polymorph I (Barzagli et al., 2012), the N···O distances vary between 2.685 (2) and 2.800 (2) Å, while in polymorph II, this distance ranges from 2.7403 (19) to 2.8536 (18) Å (Table 2). With regard to O—H···O hydrogen bonds, polymorph II has one [O1—H1···O2iii: O1···O2 = 2.738 (2) Å; see Table 2 for symmetry codes], while polymorph I has two [O···O = 2.598 (2) and 2.758 (2) Å]. Interlayer C—H···O contacts are present in both polymorphs. The C···O distance in polymorph II [C4···O1 = 3.498 (2) Å] is shorter than those present in polymorph I [C···O = 3.629 (2)–3.739 (2) Å].
In order to analyse the crystal structures of carbonates, a search was made of the Cambridge Structural Database (CSD, Version of 2015; Groom & Allen, 2014) using the CONQUEST software. After excluding organometallic compounds, the search resulted in 40 structures containing the carbonate anion that can be divided into three groups. The first group includes three structures formed by the carbonate anion and alkali cations. The second contains structures consisting of the carbonate anion, organic cations and neutral organic molecules, which are cocrystallized. The last group comprises four crystal structures formed by the carbonate anion and organic cations only [CSD refcodes BGUDCB10 (Pinkerton & Schwarzenbach, 1978), GUANCB (Adams & Small, 1974), YAXNOC (Nowakowska et al., 2012) and YENGOP (Barzagli et al., 2012), the last being polymorph I discussed in this paper]. Similar to polymorph II, in the crystal structures of all four of these compounds, the carbonate anions and the cations form layers of an alternating cation–anion–cation neutral structure. Within each layer, carbonate anions and cations are connected through hydrogen bonds. Similar to polymorphs I and II, in BGUDCB10, GUANCB and YAXNOC, the carbonate anion is linked to six cations. In BGUDCB10, the carbonate anion is connected to the cations through ten N—H···O hydrogen bonds (two one-point connections and four two-point connections). In GUANCB, the carbonate anion is bonded to the cations through eight N—H···O hydrogen bonds (four one-point connections and two two-point connections) and in YAXNOC it is linked to the cations through six N—H···O hydrogen bonds (six one-point connections). In BGUDCB10, YAXNOC and YENGOP, the cations form edge-sharing octahedra around the anions such as in polymorph II, while the octahedra are sharing commun corners in the GUANCB structure. [The Results and discussion section might benefit from being broken into separate sections with titles, for example, "DFT calculations"]
Alkanolamines, such as monoethanolamine, diethanolamine, methyldiethanolamine and 2-amino-2-methylpropan-1-ol, have been known for their high CO2 absorption for over 60 years (Yang et al., 2008). They are used widely in the natural gas industry for industrial applications in CO2 reversible capture from natural gas extraction and gas refinery (Barzagli et al., 2012). In an attempt to crystallize a salt of (RS)-2-(3-benzoylphenyl)propionic acid with 2-amino-2-methylpropan-1-ol, we obtained instead a polymorph (denoted polymorph II) of bis(1-hydroxy-2-methylpropan-2-aminium) carbonate, (I), suggesting that the amine group of the former compound captured CO2 from the atmosphere forming the aminium carbonate salt. In 2012, a previous polymorph (denoted polymorph I) was crystallized in the triclinic system (Barzagli et al., 2012).
The asymmetric unit of polymorph II of the title salt, (I), contains one 1-hydroxy-2-methylpropan-2-aminium cation and half a carbonate anion located on a twofold axis (Fig. 1). The formula unit '2(C4H12NO)·CO3' contains ten hydrogen-bond donors for only five hydrogen-bond acceptors. Whereas all donors belong to the cations, three of five acceptors are found in the anion and the remaining two in the cations. In the crystal structure of polymorph II, the cation is bonded, via four hydrogen bonds, to three anions. Two anions are linked to the cation by a single N—H···O hydrogen bond, while the third is connected to the cation by one N—H···O and one O—H···O hydrogen bond. The carbonate anion is linked to six cations through eight hydrogen bonds. It is connected to four cations through single N—H···O hydrogen bonds and to the two other cations via both O—H···O and N—H···O hydrogen bonds, forming neutral layers of alternated cation–anion–cation planes which are parallel to the ab plane (Fig. 2). These layers, located at z = 1/4 and 3/4, interact through van der Waals interactions and C—H···O hydrogen bonds, leading to an infinite three-dimensional network (Fig. 3 and Table 2).
The asymmetric unit of polymorph I (Barzagli et al., 2012) of (I) contains two 1-hydroxy-2-methylpropan-2-aminium cations and one carbonate anion. The formula unit contains eight hydrogen-bond donors in two cations for only four hydrogen-bond acceptors, i.e. three in the anion and one in one cation. Accordingly, the two independent cations are fundamentally distinct from one another in terms of their hydrogen-bond interactions. The first cation is bonded to three anions and one cation, linked to two of the three anions by N—H···O hydrogen bonds and to the third by one O—H···O hydrogen bond, and linked to another equivalent cation through inversion centre symmetry by two N—H···O hydrogen bonds. Similar to polymorph II, the second cation in polymorph I is bonded to three anions, linked to two by single N—H···O hydrogen bonds and to the third by N—H···O and O—H···O hydrogen bonds. In the crystal structure of polymorph I, the carbonate anion is also surrounded by six cations, linked to four through N—H···O hydrogen bonds and to a fifth by two hydrogen bonds (N—H···O and O—H···O), similar to polymorph II. The main difference with polymorph II is seen in the link to the sixth cation via only an O—H···O hydrogen bond in polymorph I. All these hydrogen bonds connect anions and cations to form neutral layers of a alternating cation–anion–cation structure, here parallel to the (011) plane (Fig. 2). These layers are interconnected through van der Waals interactions and C—H···O contacts (Fig. 3). The formation of the hydrogen-bonded cation–anion–cation structure in both polymorphs I and II can be regarded as a consequence of the 2:1 cation–anion ratio and the higher concentration of hydrogen-bond donors relative to hydrogen-bond acceptors in their crystal structures.
In the crystal structures of polymorphs I and II, the centroids of the cations form edge-sharing octahedra around the anions. These octahedra, which are oriented in a similar manner in both polymorphs, form similar layers (Figs. 4 and 5), as outlined before. In polymorph II, the six centroid-to-centroid distances between the anion and the cations of each octahedron range from 4.101 to 4.738 Å. In polymorph I, five centroid-to-centroid distances vary from 4.007 to 4.651 Å, corresponding to anion–cation hydrogen-bonding interactions similar to those present in polymorph II. The sixth centroid-to-centroid distance, equal to 5.602 Å, is the longest and corresponds to a different relative orientation between the sixth cation and the central anion with respect to that found in polymorph II. This is propably the source of the greatest deformation of the octahedra in polymorph I compared with those of the polymorph II (Figs. 4 and 5), as observed by the angles formed between the centroid of the central anion and those of the cations in trans positions with respect to the anion (156.05, 166.99 and 168.7° for polymorph I, compared with 170.47 and 173.80° for polymorph II). In both polymorphs, each layer comprises one plane formed by the centroids of the anions (anionic plane), which is located between two planes formed by the centroids of the cations (cationic planes) (Fig. 6). In polymorph II, the layer thickness (4.918 Å) is larger than that of polymorph I (4.216 Å) (Fig. 6). In addition, the interlayer distance in polymorph II (4.327 Å) is greater than in polymorph I (3.969 Å), while the surface occupied by one '2(C4H12NO)·CO3' formula unit in the layers of the former (33.5 Å2) is smaller than in those of the latter (39.3 Å2) (Figs. 4 and 5). As a consequence, the layers in polymorph II are denser and more distant with respect to each other than those in polymorph I, leading to a crystalline density difference of 4.5% between the two polymorphs (1.287 Mg m−3 at 100 K for polymorph II and 1.232 Mg m−3 at 173 K for polymorph I).
In order to estimate the relative stability of the two polymorphs, periodic theoretical calculations at the Density Functional level of Theory (DFT) have been performed on both structures. The geometry optimizations (unit-cell parameters and atomic positions) of these two crystal phases leading to energy minima were achieved using the B3LYP hybrid exchange/correlation functional with the 6–31G** basis set (Vosko et al., 1980; Becke, 1993) and the CRYSTAL14 program (Dovesi et al., 2014). Using dispersion corrections (Grimme, 2006), the two polymorphs were observed to have almost the same stability [ΔE(II–I) = −0.2 kJ mol−1 per '2(C4H12NO)·CO3' formula unit, in line with their close structural similarity. The unit-cell volume of each polymorph decreases after geometry optimizations; this decrease is more important in polymorph I, whose structure was determined at higher temperature (T = 173 K) than in polymorph II (T = 100 K).
In polymorph II, the bonding angles of the carbonate anion [119.62 (11) and 120.8 (2)°] are very close to the formal value of 120°. The O2—C5 bond length [1.2934 (17) Å] is slightly longer than the O3—C5 bond length [1.283 (3) Å]. This is probably due to the fact that the O2 atom is an acceptor of three hydrogen bonds, two involving the NH3+ ammonium group of the organic cation (N1—H2···O2 and N1—H3···O2) and one involving the hydroxy group (O1—H1···O2), while the O3 atom is an acceptor of two N1—H4···O3 hydrogen bonds (Table 2).
A correlation between observed C—O bond lengths and the number of classical hydrogen bonds which are accepted by the O atom is also observed in polymorph I. The O3—C9 bond length [1.298 (1) Å] is longer than the O4—C9 [1.274 (1) Å] and O5—C9 [1.275 (1) Å] bond lengths. This is probably due to the fact that the O3 atom is an acceptor of three hydrogen bonds, two involving the NH3+ ammonium group of the organic cation (N2—H23N···O3 and N1—H11N···O3) and one involving the hydroxy group (O2—H2···O3), while the O4 and O5 atoms are acceptors of only two hydrogen bonds each (N2—H22N···O4 and N2—H21N···O4, and N1—H13···O5 and O1—H1···O5).
Comparing the intralayer interactions of the two polymorphs, we note that the N—H···O hydrogen-bond lengths are comparable. Indeed, for polymorph I (Barzagli et al., 2012), the N···O distances vary between 2.685 (2) and 2.800 (2) Å, while in polymorph II, this distance ranges from 2.7403 (19) to 2.8536 (18) Å (Table 2). With regard to O—H···O hydrogen bonds, polymorph II has one [O1—H1···O2iii: O1···O2 = 2.738 (2) Å; see Table 2 for symmetry codes], while polymorph I has two [O···O = 2.598 (2) and 2.758 (2) Å]. Interlayer C—H···O contacts are present in both polymorphs. The C···O distance in polymorph II [C4···O1 = 3.498 (2) Å] is shorter than those present in polymorph I [C···O = 3.629 (2)–3.739 (2) Å].
In order to analyse the crystal structures of carbonates, a search was made of the Cambridge Structural Database (CSD, Version of 2015; Groom & Allen, 2014) using the CONQUEST software. After excluding organometallic compounds, the search resulted in 40 structures containing the carbonate anion that can be divided into three groups. The first group includes three structures formed by the carbonate anion and alkali cations. The second contains structures consisting of the carbonate anion, organic cations and neutral organic molecules, which are cocrystallized. The last group comprises four crystal structures formed by the carbonate anion and organic cations only [CSD refcodes BGUDCB10 (Pinkerton & Schwarzenbach, 1978), GUANCB (Adams & Small, 1974), YAXNOC (Nowakowska et al., 2012) and YENGOP (Barzagli et al., 2012), the last being polymorph I discussed in this paper]. Similar to polymorph II, in the crystal structures of all four of these compounds, the carbonate anions and the cations form layers of an alternating cation–anion–cation neutral structure. Within each layer, carbonate anions and cations are connected through hydrogen bonds. Similar to polymorphs I and II, in BGUDCB10, GUANCB and YAXNOC, the carbonate anion is linked to six cations. In BGUDCB10, the carbonate anion is connected to the cations through ten N—H···O hydrogen bonds (two one-point connections and four two-point connections). In GUANCB, the carbonate anion is bonded to the cations through eight N—H···O hydrogen bonds (four one-point connections and two two-point connections) and in YAXNOC it is linked to the cations through six N—H···O hydrogen bonds (six one-point connections). In BGUDCB10, YAXNOC and YENGOP, the cations form edge-sharing octahedra around the anions such as in polymorph II, while the octahedra are sharing commun corners in the GUANCB structure. [The Results and discussion section might benefit from being broken into separate sections with titles, for example, "DFT calculations"]
A solution of 2-amino-2-methylpropan-1-ol (0.2 ml, 2 mmol) in acetonitrile (0.5 ml) was added to a solution of 2-(3-benzoylphenyl)propionic acid (32 mg, 0.125 mmol) in acetonitrile (0.5 ml). Colourless crystals of bis(1-hydroxy-2-methylpropan-2-aminium) carbonate, (I), suitable for X-ray diffraction analysis were obtained after 4 d by slow evaporation of the solution at room temperature.
Crystal data, data collection and structure refinement details are summarized in Table 1. H atoms bonded to O and N atoms were observed in the difference Fourier synthesis. They were placed at the observed positions and allowed to refine freely with an isotropic displacement parameter. The remaining H atoms were positioned geometrically and allowed to ride on their respective parent atoms, with C—H = 0.98 Å and Uiso(H) = 1.5Ueq(C) for methyl H atoms, and C—H = 0.99 Å and Uiso(H) = 1.2Ueq(C) for methylene H atoms.
Data collection: (CrysAlis PRO; Agilent, 2014); cell refinement: (CrysAlis PRO; Agilent, 2014); data reduction: (CrysAlis PRO; Agilent, 2014); program(s) used to solve structure: SIR92 (Altomare et al., 1994); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015); molecular graphics: Mercury (Macrae et al., 2006); software used to prepare material for publication: SHELXL2014 (Sheldrick, 2015).
2C4H12NO+·CO32− | F(000) = 528 |
Mr = 240.30 | Dx = 1.287 Mg m−3 |
Monoclinic, C2/c | Cu Kα radiation, λ = 1.54184 Å |
a = 10.6114 (9) Å | Cell parameters from 2163 reflections |
b = 6.3184 (7) Å | θ = 8.2–75.9° |
c = 19.063 (2) Å | µ = 0.87 mm−1 |
β = 104.075 (9)° | T = 100 K |
V = 1239.7 (2) Å3 | Block, colourless |
Z = 4 | 0.18 × 0.12 × 0.07 mm |
Oxford SuperNova diffractometer | 1296 independent reflections |
Radiation source: sealed X-ray tube | 1089 reflections with I > 2σ(I) |
Detector resolution: 10.4508 pixels mm-1 | Rint = 0.045 |
ω scans | θmax = 76.9°, θmin = 4.8° |
Absorption correction: analytical [CrysAlis PRO (Agilent, 2014), based on expressions derived by Clark & Reid (1995)] | h = −13→13 |
Tmin = 0.895, Tmax = 0.950 | k = −7→7 |
4510 measured reflections | l = −23→23 |
Refinement on F2 | 0 restraints |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.053 | w = 1/[σ2(Fo2) + (0.0927P)2 + 1.3673P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.159 | (Δ/σ)max < 0.001 |
S = 1.09 | Δρmax = 0.37 e Å−3 |
1296 reflections | Δρmin = −0.30 e Å−3 |
90 parameters |
2C4H12NO+·CO32− | V = 1239.7 (2) Å3 |
Mr = 240.30 | Z = 4 |
Monoclinic, C2/c | Cu Kα radiation |
a = 10.6114 (9) Å | µ = 0.87 mm−1 |
b = 6.3184 (7) Å | T = 100 K |
c = 19.063 (2) Å | 0.18 × 0.12 × 0.07 mm |
β = 104.075 (9)° |
Oxford SuperNova diffractometer | 1296 independent reflections |
Absorption correction: analytical [CrysAlis PRO (Agilent, 2014), based on expressions derived by Clark & Reid (1995)] | 1089 reflections with I > 2σ(I) |
Tmin = 0.895, Tmax = 0.950 | Rint = 0.045 |
4510 measured reflections |
R[F2 > 2σ(F2)] = 0.053 | 0 restraints |
wR(F2) = 0.159 | H-atom parameters constrained |
S = 1.09 | Δρmax = 0.37 e Å−3 |
1296 reflections | Δρmin = −0.30 e Å−3 |
90 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
O3 | 0.5000 | 0.7255 (3) | 0.7500 | 0.0185 (4) | |
O2 | 0.60837 (11) | 0.4212 (2) | 0.77210 (7) | 0.0176 (4) | |
O1 | 0.79741 (13) | 0.1198 (2) | 0.59807 (8) | 0.0208 (4) | |
N1 | 0.80245 (14) | 0.5035 (2) | 0.69501 (8) | 0.0158 (4) | |
C5 | 0.5000 | 0.5224 (4) | 0.7500 | 0.0145 (5) | |
C1 | 0.74396 (17) | 0.4943 (3) | 0.61461 (10) | 0.0157 (4) | |
C3 | 0.62788 (17) | 0.6436 (3) | 0.59678 (11) | 0.0204 (4) | |
H11 | 0.5885 | 0.6398 | 0.5447 | 0.031* | |
H10 | 0.5637 | 0.5990 | 0.6231 | 0.031* | |
H12 | 0.6567 | 0.7880 | 0.6112 | 0.031* | |
C4 | 0.84836 (17) | 0.5593 (3) | 0.57641 (10) | 0.0190 (4) | |
H8 | 0.8126 | 0.5546 | 0.5240 | 0.029* | |
H7 | 0.8776 | 0.7034 | 0.5909 | 0.029* | |
H9 | 0.9221 | 0.4616 | 0.5898 | 0.029* | |
C2 | 0.69656 (17) | 0.2684 (3) | 0.59443 (10) | 0.0185 (4) | |
H5 | 0.6426 | 0.2222 | 0.6273 | 0.022* | |
H6 | 0.6405 | 0.2690 | 0.5446 | 0.022* | |
H3 | 0.738 (2) | 0.489 (4) | 0.7197 (13) | 0.017 (5)* | |
H4 | 0.869 (3) | 0.407 (5) | 0.7072 (17) | 0.035 (7)* | |
H1 | 0.822 (3) | 0.073 (5) | 0.6410 (19) | 0.041 (8)* | |
H2 | 0.842 (3) | 0.643 (5) | 0.7078 (17) | 0.038 (8)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O3 | 0.0159 (8) | 0.0142 (9) | 0.0258 (10) | 0.000 | 0.0062 (7) | 0.000 |
O2 | 0.0141 (7) | 0.0189 (7) | 0.0223 (7) | 0.0031 (5) | 0.0094 (5) | 0.0022 (5) |
O1 | 0.0217 (7) | 0.0202 (7) | 0.0221 (8) | 0.0035 (5) | 0.0087 (5) | −0.0011 (5) |
N1 | 0.0132 (7) | 0.0184 (8) | 0.0189 (8) | 0.0006 (6) | 0.0099 (6) | 0.0002 (6) |
C5 | 0.0135 (11) | 0.0170 (12) | 0.0159 (12) | 0.000 | 0.0090 (9) | 0.000 |
C1 | 0.0138 (8) | 0.0173 (9) | 0.0187 (9) | 0.0004 (6) | 0.0091 (6) | 0.0004 (6) |
C3 | 0.0159 (8) | 0.0217 (9) | 0.0260 (10) | 0.0025 (7) | 0.0096 (7) | 0.0036 (7) |
C4 | 0.0170 (8) | 0.0215 (9) | 0.0225 (9) | −0.0012 (7) | 0.0124 (7) | −0.0006 (7) |
C2 | 0.0153 (8) | 0.0205 (9) | 0.0205 (9) | −0.0004 (7) | 0.0060 (6) | −0.0006 (7) |
O3—C5 | 1.283 (3) | C1—C2 | 1.532 (3) |
O2—C5 | 1.2934 (17) | C3—H11 | 0.9800 |
O1—C2 | 1.412 (2) | C3—H10 | 0.9800 |
O1—H1 | 0.85 (3) | C3—H12 | 0.9800 |
N1—C1 | 1.508 (2) | C4—H8 | 0.9800 |
N1—H3 | 0.92 (3) | C4—H7 | 0.9800 |
N1—H4 | 0.92 (3) | C4—H9 | 0.9800 |
N1—H2 | 0.99 (3) | C2—H5 | 0.9900 |
C1—C3 | 1.523 (2) | C2—H6 | 0.9900 |
C1—C4 | 1.523 (2) | ||
C2—O1—H1 | 109 (2) | C1—C3—H10 | 109.5 |
C1—N1—H3 | 110.0 (15) | H11—C3—H10 | 109.5 |
C1—N1—H4 | 109.5 (19) | C1—C3—H12 | 109.5 |
H3—N1—H4 | 115 (2) | H11—C3—H12 | 109.5 |
C1—N1—H2 | 109.3 (18) | H10—C3—H12 | 109.5 |
H3—N1—H2 | 107 (2) | C1—C4—H8 | 109.5 |
H4—N1—H2 | 106 (2) | C1—C4—H7 | 109.5 |
O3—C5—O2i | 119.62 (11) | H8—C4—H7 | 109.5 |
O3—C5—O2 | 119.62 (11) | C1—C4—H9 | 109.5 |
O2i—C5—O2 | 120.8 (2) | H8—C4—H9 | 109.5 |
N1—C1—C3 | 108.29 (14) | H7—C4—H9 | 109.5 |
N1—C1—C4 | 107.95 (14) | O1—C2—C1 | 114.11 (14) |
C3—C1—C4 | 111.69 (15) | O1—C2—H5 | 108.7 |
N1—C1—C2 | 108.64 (14) | C1—C2—H5 | 108.7 |
C3—C1—C2 | 108.84 (14) | O1—C2—H6 | 108.7 |
C4—C1—C2 | 111.33 (14) | C1—C2—H6 | 108.7 |
C1—C3—H11 | 109.5 | H5—C2—H6 | 107.6 |
N1—C1—C2—O1 | −71.47 (18) | C4—C1—C2—O1 | 47.3 (2) |
C3—C1—C2—O1 | 170.81 (14) |
Symmetry code: (i) −x+1, y, −z+3/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H8···O1ii | 0.98 | 2.58 | 3.498 (2) | 156 |
N1—H3···O2 | 0.92 (3) | 1.94 (3) | 2.8536 (18) | 173 (2) |
N1—H4···O3iii | 0.92 (3) | 1.84 (3) | 2.7403 (19) | 169 (3) |
O1—H1···O2iv | 0.85 (3) | 1.90 (4) | 2.738 (2) | 168 (3) |
N1—H2···O2v | 0.99 (3) | 1.84 (3) | 2.823 (2) | 171 (3) |
Symmetry codes: (ii) −x+3/2, −y+1/2, −z+1; (iii) x+1/2, y−1/2, z; (iv) −x+3/2, y−1/2, −z+3/2; (v) −x+3/2, y+1/2, −z+3/2. |
Experimental details
Crystal data | |
Chemical formula | 2C4H12NO+·CO32− |
Mr | 240.30 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 100 |
a, b, c (Å) | 10.6114 (9), 6.3184 (7), 19.063 (2) |
β (°) | 104.075 (9) |
V (Å3) | 1239.7 (2) |
Z | 4 |
Radiation type | Cu Kα |
µ (mm−1) | 0.87 |
Crystal size (mm) | 0.18 × 0.12 × 0.07 |
Data collection | |
Diffractometer | Oxford SuperNova |
Absorption correction | Analytical [CrysAlis PRO (Agilent, 2014), based on expressions derived by Clark & Reid (1995)] |
Tmin, Tmax | 0.895, 0.950 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4510, 1296, 1089 |
Rint | 0.045 |
(sin θ/λ)max (Å−1) | 0.632 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.053, 0.159, 1.09 |
No. of reflections | 1296 |
No. of parameters | 90 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.37, −0.30 |
Computer programs: (CrysAlis PRO; Agilent, 2014), SIR92 (Altomare et al., 1994), SHELXL2014 (Sheldrick, 2015), Mercury (Macrae et al., 2006).
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H8···O1i | 0.98 | 2.58 | 3.498 (2) | 155.5 |
N1—H3···O2 | 0.92 (3) | 1.94 (3) | 2.8536 (18) | 173 (2) |
N1—H4···O3ii | 0.92 (3) | 1.84 (3) | 2.7403 (19) | 169 (3) |
O1—H1···O2iii | 0.85 (3) | 1.90 (4) | 2.738 (2) | 168 (3) |
N1—H2···O2iv | 0.99 (3) | 1.84 (3) | 2.823 (2) | 171 (3) |
Symmetry codes: (i) −x+3/2, −y+1/2, −z+1; (ii) x+1/2, y−1/2, z; (iii) −x+3/2, y−1/2, −z+3/2; (iv) −x+3/2, y+1/2, −z+3/2. |
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