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The crystal structure of the title compound, C24H28O8, has been determined. The conformation of the furanose ring can be described as 58% ideal envelope OE conformer and 42% ideal twisted OT1 conformer. The 1,3-dioxane ring adopts a chair conformation with the anhydro-O atom pointing upwards. Both phenyl rings are quasi-perpendicular to the mean plane of the furanose ring. The hydrogen bonding is intermolecular and consists of infinite chains parallel to the a axis.
Supporting information
CCDC reference: 150869
Data collection: CAD-4 Software (Enraf-Nonius, 1989); cell refinement: CAD-4 Software; data reduction: maXus (Mackay et al., 1999); program(s) used to solve structure: SIR92 (Altomare et al., 1994); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: maXus.
1,6-Anhydro-2,3-di-
O-benzyl-5
C-[(
R)-ethoxycarbonyl(hydroxy)methyl]-L– altrofuranose
top
Crystal data top
C24H28O8 | Dx = 1.326 Mg m−3 |
Mr = 444.46 | Cu Kα radiation, λ = 1.54180 Å |
Orthorhombic, P212121 | Cell parameters from 25 reflections |
a = 5.6740 (14) Å | θ = 9.5–32.9° |
b = 11.699 (6) Å | µ = 0.83 mm−1 |
c = 33.5340 (15) Å | T = 293 K |
V = 2226.0 (13) Å3 | Prismatic, colourless |
Z = 4 | 0.40 × 0.25 × 0.25 mm |
F(000) = 944 | |
Data collection top
Enraf-Nonius MACH3 diffractometer | Rint = 0.000 |
Radiation source: Nonius FR591 rotating Cu anode | θmax = 70.0°, θmin = 2.6° |
Graphite monochromator | h = 0→6 |
ω/2θ scans | k = 0→14 |
2447 measured reflections | l = 0→40 |
2447 independent reflections | 3 standard reflections every 60 min |
1942 reflections with I > 2σ(I) | intensity decay: 0.2% |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.051 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.148 | H-atom parameters constrained |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0816P)2 + 0.5716P] where P = (Fo2 + 2Fc2)/3 |
2447 reflections | (Δ/σ)max < 0.001 |
289 parameters | Δρmax = 0.22 e Å−3 |
0 restraints | Δρmin = −0.21 e Å−3 |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 0.7901 (6) | 0.6073 (3) | 0.14208 (8) | 0.0920 (9) | |
C1 | 0.8302 (7) | 0.7212 (5) | 0.15612 (12) | 0.0890 (14) | |
H11 | 0.9408 | 0.7199 | 0.1785 | 0.116* | |
C2 | 0.6094 (6) | 0.7855 (3) | 0.16776 (10) | 0.0680 (9) | |
H21 | 0.6528 | 0.8490 | 0.1854 | 0.088* | |
C3 | 0.5215 (6) | 0.8341 (3) | 0.12800 (10) | 0.0622 (8) | |
H31 | 0.3762 | 0.7952 | 0.1198 | 0.081* | |
C4 | 0.7208 (6) | 0.8046 (4) | 0.09952 (11) | 0.0729 (10) | |
H41 | 0.7475 | 0.8666 | 0.0804 | 0.095* | |
O4 | 0.9225 (5) | 0.7889 (3) | 0.12487 (9) | 0.1065 (12) | |
C5 | 0.6807 (6) | 0.6893 (4) | 0.07783 (10) | 0.0683 (10) | |
C6 | 0.6254 (8) | 0.6006 (3) | 0.10985 (10) | 0.0758 (10) | |
H61 | 0.4672 | 0.6132 | 0.1199 | 0.099* | |
H62 | 0.6310 | 0.5248 | 0.0982 | 0.099* | |
O5 | 0.8922 (5) | 0.6571 (4) | 0.05771 (8) | 0.1104 (13) | |
H5 | 0.8851 | 0.6775 | 0.0343 | 0.144* | |
C7 | 0.4882 (6) | 0.7014 (3) | 0.04625 (11) | 0.0644 (8) | |
H71 | 0.3352 | 0.7142 | 0.0590 | 0.084* | |
O7 | 0.5486 (5) | 0.7962 (2) | 0.02231 (8) | 0.0848 (9) | |
H7 | 0.4282 | 0.8295 | 0.0153 | 0.110* | |
C8 | 0.4785 (6) | 0.5947 (3) | 0.02018 (11) | 0.0686 (9) | |
O8 | 0.5528 (6) | 0.5882 (3) | −0.01323 (9) | 0.0946 (9) | |
O9 | 0.3750 (5) | 0.5093 (2) | 0.03964 (8) | 0.0810 (8) | |
C9 | 0.3541 (12) | 0.4011 (4) | 0.01875 (15) | 0.1029 (16) | |
H91 | 0.4843 | 0.3922 | 0.0003 | 0.134* | |
H92 | 0.3596 | 0.3385 | 0.0377 | 0.134* | |
C10 | 0.1332 (16) | 0.3987 (5) | −0.0027 (2) | 0.137 (2) | |
H10 | 0.1182 | 0.3271 | −0.0165 | 0.178* | |
H10B | 0.1297 | 0.4601 | −0.0217 | 0.178* | |
H10C | 0.0051 | 0.4072 | 0.0157 | 0.178* | |
O3 | 0.4794 (6) | 0.9548 (2) | 0.13268 (8) | 0.0820 (8) | |
C11 | 0.3235 (8) | 0.9966 (3) | 0.10342 (11) | 0.0782 (11) | |
H11B | 0.1773 | 0.9538 | 0.1043 | 0.102* | |
H11C | 0.3927 | 0.9870 | 0.0772 | 0.102* | |
C12 | 0.2748 (7) | 1.1203 (3) | 0.11076 (10) | 0.0654 (9) | |
C13 | 0.4263 (9) | 1.1911 (3) | 0.13033 (12) | 0.0808 (11) | |
H13 | 0.5691 | 1.1622 | 0.1395 | 0.105* | |
C14 | 0.3731 (11) | 1.3047 (4) | 0.13690 (15) | 0.0984 (15) | |
H14 | 0.4814 | 1.3510 | 0.1500 | 0.128* | |
C15 | 0.1682 (11) | 1.3490 (4) | 0.12474 (15) | 0.0977 (15) | |
H15 | 0.1309 | 1.4249 | 0.1302 | 0.127* | |
C16 | 0.0142 (10) | 1.2812 (4) | 0.10417 (16) | 0.1049 (15) | |
H16 | −0.1263 | 1.3118 | 0.0947 | 0.136* | |
C17 | 0.0661 (9) | 1.1671 (4) | 0.09742 (15) | 0.0925 (13) | |
H17 | −0.0410 | 1.1216 | 0.0837 | 0.120* | |
O2 | 0.4317 (4) | 0.7205 (2) | 0.18621 (6) | 0.0656 (6) | |
C18 | 0.4966 (9) | 0.6844 (4) | 0.22553 (11) | 0.0931 (13) | |
H18 | 0.5188 | 0.7504 | 0.2426 | 0.121* | |
H18B | 0.6433 | 0.6419 | 0.2246 | 0.121* | |
C19 | 0.3039 (7) | 0.6103 (3) | 0.24169 (9) | 0.0672 (9) | |
C20 | 0.2348 (13) | 0.5154 (4) | 0.22282 (15) | 0.1144 (18) | |
H20 | 0.3085 | 0.4956 | 0.1990 | 0.149* | |
C21 | 0.0636 (19) | 0.4479 (6) | 0.2369 (2) | 0.159 (3) | |
H21B | 0.0202 | 0.3831 | 0.2226 | 0.207* | |
C22 | −0.0458 (13) | 0.4717 (7) | 0.2710 (2) | 0.136 (3) | |
H22 | −0.1614 | 0.4228 | 0.2808 | 0.177* | |
C23 | 0.0108 (14) | 0.5649 (8) | 0.29078 (16) | 0.140 (3) | |
H23 | −0.0673 | 0.5829 | 0.3143 | 0.181* | |
C24 | 0.1905 (12) | 0.6378 (5) | 0.27625 (12) | 0.1084 (17) | |
H24 | 0.2309 | 0.7037 | 0.2901 | 0.141* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.0818 (19) | 0.118 (2) | 0.0761 (15) | 0.0400 (19) | 0.0012 (15) | 0.0385 (16) |
C1 | 0.055 (2) | 0.137 (4) | 0.075 (2) | −0.011 (3) | −0.0155 (18) | 0.045 (3) |
C2 | 0.0616 (19) | 0.077 (2) | 0.0649 (17) | −0.0138 (19) | −0.0178 (16) | 0.0123 (17) |
C3 | 0.0604 (19) | 0.0586 (17) | 0.0676 (18) | −0.0135 (17) | −0.0193 (16) | 0.0143 (15) |
C4 | 0.0461 (17) | 0.099 (3) | 0.0737 (19) | −0.0198 (19) | −0.0174 (16) | 0.035 (2) |
O4 | 0.0492 (13) | 0.182 (3) | 0.0878 (17) | −0.0314 (19) | −0.0206 (13) | 0.063 (2) |
C5 | 0.0404 (15) | 0.099 (3) | 0.0660 (18) | 0.0145 (18) | 0.0056 (14) | 0.0297 (19) |
C6 | 0.083 (3) | 0.075 (2) | 0.0689 (19) | 0.025 (2) | 0.008 (2) | 0.0194 (17) |
O5 | 0.0619 (15) | 0.200 (4) | 0.0690 (15) | 0.047 (2) | 0.0153 (13) | 0.042 (2) |
C7 | 0.0513 (17) | 0.0682 (18) | 0.074 (2) | 0.0036 (17) | −0.0021 (16) | 0.0171 (16) |
O7 | 0.0921 (19) | 0.0736 (14) | 0.0887 (16) | −0.0150 (15) | −0.0386 (16) | 0.0318 (13) |
C8 | 0.0559 (19) | 0.0687 (19) | 0.081 (2) | 0.0126 (17) | 0.0129 (18) | 0.0184 (17) |
O8 | 0.106 (2) | 0.0917 (18) | 0.0866 (17) | 0.0068 (19) | 0.0311 (18) | 0.0105 (15) |
O9 | 0.0897 (19) | 0.0704 (14) | 0.0827 (15) | −0.0150 (15) | 0.0141 (15) | 0.0085 (13) |
C9 | 0.138 (5) | 0.064 (2) | 0.106 (3) | 0.000 (3) | 0.014 (4) | 0.004 (2) |
C10 | 0.171 (6) | 0.092 (3) | 0.147 (5) | −0.020 (4) | −0.030 (5) | −0.015 (3) |
O3 | 0.102 (2) | 0.0600 (12) | 0.0844 (15) | −0.0180 (15) | −0.0386 (16) | 0.0104 (11) |
C11 | 0.098 (3) | 0.0642 (19) | 0.073 (2) | −0.010 (2) | −0.027 (2) | 0.0056 (16) |
C12 | 0.075 (2) | 0.0596 (18) | 0.0618 (17) | −0.0117 (19) | 0.0039 (18) | 0.0049 (15) |
C13 | 0.086 (3) | 0.069 (2) | 0.088 (2) | −0.001 (2) | −0.005 (2) | −0.0082 (19) |
C14 | 0.117 (4) | 0.070 (2) | 0.108 (3) | −0.001 (3) | −0.007 (3) | −0.025 (2) |
C15 | 0.113 (4) | 0.072 (2) | 0.108 (3) | 0.008 (3) | 0.019 (3) | −0.005 (2) |
C16 | 0.100 (4) | 0.082 (3) | 0.133 (4) | 0.009 (3) | −0.004 (3) | 0.023 (3) |
C17 | 0.091 (3) | 0.078 (2) | 0.109 (3) | −0.014 (3) | −0.017 (3) | 0.015 (2) |
O2 | 0.0633 (13) | 0.0786 (14) | 0.0550 (11) | −0.0068 (13) | −0.0066 (10) | 0.0148 (10) |
C18 | 0.101 (3) | 0.115 (3) | 0.0631 (19) | −0.026 (3) | −0.019 (2) | 0.026 (2) |
C19 | 0.076 (2) | 0.076 (2) | 0.0487 (15) | 0.010 (2) | −0.0028 (16) | 0.0111 (15) |
C20 | 0.153 (5) | 0.094 (3) | 0.095 (3) | −0.027 (4) | 0.026 (4) | −0.021 (3) |
C21 | 0.208 (9) | 0.128 (5) | 0.143 (5) | −0.068 (6) | −0.001 (6) | 0.023 (4) |
C22 | 0.101 (4) | 0.178 (7) | 0.130 (5) | −0.024 (5) | −0.013 (4) | 0.097 (5) |
C23 | 0.135 (6) | 0.208 (7) | 0.076 (3) | 0.046 (6) | 0.044 (4) | 0.037 (4) |
C24 | 0.156 (5) | 0.108 (3) | 0.061 (2) | 0.018 (4) | 0.013 (3) | 0.000 (2) |
Geometric parameters (Å, º) top
O1—C1 | 1.431 (6) | C9—C10 | 1.446 (10) |
O1—C6 | 1.431 (5) | O3—C11 | 1.409 (4) |
C1—O4 | 1.414 (5) | C11—C12 | 1.493 (5) |
C1—C2 | 1.512 (6) | C12—C13 | 1.363 (5) |
C2—O2 | 1.406 (4) | C12—C17 | 1.379 (6) |
C2—C3 | 1.533 (4) | C13—C14 | 1.380 (6) |
C3—O3 | 1.441 (4) | C14—C15 | 1.337 (8) |
C3—C4 | 1.520 (6) | C15—C16 | 1.367 (7) |
C4—O4 | 1.438 (4) | C16—C17 | 1.385 (7) |
C4—C5 | 1.549 (6) | O2—C18 | 1.433 (4) |
C5—O5 | 1.427 (4) | C18—C19 | 1.497 (6) |
C5—C6 | 1.526 (5) | C19—C20 | 1.337 (6) |
C5—C7 | 1.528 (5) | C19—C24 | 1.364 (6) |
C7—O7 | 1.411 (4) | C20—C21 | 1.338 (10) |
C7—C8 | 1.525 (5) | C21—C22 | 1.332 (10) |
C8—O8 | 1.199 (4) | C22—C23 | 1.315 (9) |
C8—O9 | 1.330 (4) | C23—C24 | 1.416 (10) |
O9—C9 | 1.452 (5) | | |
| | | |
C1—O1—C6 | 113.8 (3) | O8—C8—C7 | 125.1 (3) |
O4—C1—O1 | 109.7 (4) | O9—C8—C7 | 110.5 (3) |
O4—C1—C2 | 102.7 (4) | C8—O9—C9 | 117.0 (3) |
O1—C1—C2 | 114.6 (3) | C10—C9—O9 | 109.2 (5) |
O2—C2—C1 | 116.0 (3) | C11—O3—C3 | 111.7 (3) |
O2—C2—C3 | 110.5 (3) | O3—C11—C12 | 109.8 (3) |
C1—C2—C3 | 103.3 (3) | C13—C12—C17 | 117.1 (4) |
O3—C3—C4 | 114.4 (3) | C13—C12—C11 | 123.5 (4) |
O3—C3—C2 | 108.8 (3) | C17—C12—C11 | 119.4 (4) |
C4—C3—C2 | 102.7 (3) | C12—C13—C14 | 121.6 (5) |
O4—C4—C3 | 104.5 (3) | C15—C14—C13 | 121.0 (5) |
O4—C4—C5 | 106.4 (3) | C14—C15—C16 | 119.0 (5) |
C3—C4—C5 | 112.5 (3) | C15—C16—C17 | 120.4 (5) |
C1—O4—C4 | 102.4 (3) | C12—C17—C16 | 120.8 (5) |
O5—C5—C6 | 109.0 (3) | C2—O2—C18 | 112.4 (3) |
O5—C5—C7 | 107.3 (3) | O2—C18—C19 | 108.4 (3) |
C6—C5—C7 | 113.8 (3) | C20—C19—C24 | 117.4 (5) |
O5—C5—C4 | 109.2 (3) | C20—C19—C18 | 121.6 (4) |
C6—C5—C4 | 107.0 (3) | C24—C19—C18 | 121.0 (4) |
C7—C5—C4 | 110.5 (3) | C19—C20—C21 | 122.4 (6) |
O1—C6—C5 | 111.1 (3) | C22—C21—C20 | 121.2 (7) |
O7—C7—C8 | 109.0 (3) | C23—C22—C21 | 119.5 (6) |
O7—C7—C5 | 107.1 (3) | C22—C23—C24 | 120.1 (5) |
C8—C7—C5 | 110.3 (3) | C19—C24—C23 | 119.3 (5) |
O8—C8—O9 | 124.5 (4) | | |
| | | |
C6—O1—C1—O4 | −60.6 (4) | O7—C7—C8—O8 | 12.9 (5) |
C6—O1—C1—C2 | 54.2 (4) | C5—C7—C8—O8 | −104.4 (4) |
O4—C1—C2—O2 | 155.5 (3) | O7—C7—C8—O9 | −166.9 (3) |
O1—C1—C2—O2 | 36.7 (4) | C5—C7—C8—O9 | 75.8 (4) |
O4—C1—C2—C3 | 34.6 (4) | O8—C8—O9—C9 | 0.6 (6) |
O1—C1—C2—C3 | −84.3 (3) | C7—C8—O9—C9 | −179.5 (4) |
O2—C2—C3—O3 | 106.4 (3) | C8—O9—C9—C10 | −90.2 (6) |
C1—C2—C3—O3 | −128.9 (3) | C4—C3—O3—C11 | 87.0 (4) |
O2—C2—C3—C4 | −131.9 (3) | C2—C3—O3—C11 | −158.8 (3) |
C1—C2—C3—C4 | −7.3 (4) | C3—O3—C11—C12 | 176.9 (3) |
O3—C3—C4—O4 | 95.8 (3) | O3—C11—C12—C13 | 25.8 (5) |
C2—C3—C4—O4 | −21.9 (4) | O3—C11—C12—C17 | −154.0 (4) |
O3—C3—C4—C5 | −149.1 (3) | C17—C12—C13—C14 | 0.6 (6) |
C2—C3—C4—C5 | 93.1 (3) | C11—C12—C13—C14 | −179.2 (4) |
O1—C1—O4—C4 | 72.7 (4) | C12—C13—C14—C15 | 1.0 (8) |
C2—C1—O4—C4 | −49.6 (4) | C13—C14—C15—C16 | −2.5 (8) |
C3—C4—O4—C1 | 45.0 (4) | C14—C15—C16—C17 | 2.5 (8) |
C5—C4—O4—C1 | −74.2 (4) | C13—C12—C17—C16 | −0.6 (7) |
O4—C4—C5—O5 | −55.2 (3) | C11—C12—C17—C16 | 179.2 (4) |
C3—C4—C5—O5 | −169.1 (3) | C15—C16—C17—C12 | −0.9 (8) |
O4—C4—C5—C6 | 62.6 (3) | C1—C2—O2—C18 | 69.7 (4) |
C3—C4—C5—C6 | −51.2 (3) | C3—C2—O2—C18 | −173.3 (3) |
O4—C4—C5—C7 | −173.0 (2) | C2—O2—C18—C19 | −176.6 (3) |
C3—C4—C5—C7 | 73.1 (3) | O2—C18—C19—C20 | 57.7 (6) |
C1—O1—C6—C5 | 47.3 (4) | O2—C18—C19—C24 | −121.8 (4) |
O5—C5—C6—O1 | 70.5 (4) | C24—C19—C20—C21 | −0.8 (9) |
C7—C5—C6—O1 | −169.8 (3) | C18—C19—C20—C21 | 179.7 (6) |
C4—C5—C6—O1 | −47.5 (4) | C19—C20—C21—C22 | −0.7 (12) |
O5—C5—C7—O7 | −67.3 (4) | C20—C21—C22—C23 | 1.8 (12) |
C6—C5—C7—O7 | 172.0 (3) | C21—C22—C23—C24 | −1.4 (11) |
C4—C5—C7—O7 | 51.7 (4) | C20—C19—C24—C23 | 1.1 (8) |
O5—C5—C7—C8 | 51.2 (4) | C18—C19—C24—C23 | −179.3 (5) |
C6—C5—C7—C8 | −69.5 (4) | C22—C23—C24—C19 | −0.1 (9) |
C4—C5—C7—C8 | 170.2 (3) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O5—H5···O7i | 0.82 | 2.14 | 2.879 (3) | 150.5 |
O7—H7···O8ii | 0.82 | 2.34 | 3.136 (5) | 164.2 |
Symmetry codes: (i) x+1/2, −y+3/2, −z; (ii) x−1/2, −y+3/2, −z. |
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