Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536810000036/ci5009sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536810000036/ci5009Isup2.hkl |
CCDC reference: 764982
Key indicators
- Single-crystal X-ray study
- T = 298 K
- Mean (C-C) = 0.008 Å
- R factor = 0.059
- wR factor = 0.157
- Data-to-parameter ratio = 18.7
checkCIF/PLATON results
No syntax errors found
Alert level C RINTA01_ALERT_3_C The value of Rint is greater than 0.12 Rint given 0.139 PLAT220_ALERT_2_C Large Non-Solvent C Ueq(max)/Ueq(min) ... 3.15 Ratio PLAT222_ALERT_3_C Large Non-Solvent H Ueq(max)/Ueq(min) ... 3.37 Ratio PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for N6 PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for C5 PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for C8 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for N2 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C25 PLAT341_ALERT_3_C Low Bond Precision on C-C Bonds (x 1000) Ang .. 7 PLAT601_ALERT_2_C Structure Contains Solvent Accessible VOIDS of . 53.00 A 3 PLAT910_ALERT_3_C Missing # of FCF Reflections Below Th(Min) ..... 1 PLAT911_ALERT_3_C Missing # FCF Refl Between THmin & STh/L= 0.600 13 PLAT244_ALERT_4_C Low 'Solvent' Ueq as Compared to Neighbors of N5 PLAT912_ALERT_4_C Missing # of FCF Reflections Above STh/L= 0.600 48
Alert level G PLAT860_ALERT_3_G Note: Number of Least-Squares Restraints ....... 6
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 14 ALERT level C = Check and explain 1 ALERT level G = General alerts; check 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 7 ALERT type 2 Indicator that the structure model may be wrong or deficient 6 ALERT type 3 Indicator that the structure quality may be low 2 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
3-Ethoxysalicylaldehyde (0.2 mmol, 33.2 mg) and N-methylethane-1,2-diamine (0.2 mmol, 14.8 mg) were dissolved in MeOH (10 ml). The mixture was stirred at room temperature for 10 min to give a clear yellow solution. To this solution was added an aqueous solution (2 ml) of ammonium thiocyanate (0.2 mmol, 15.2 mg) and an aqueous solution (3 ml) of Zn(NO3)2.6H2O (0.1 mmol, 29.0 mg) with stirring. The resulting mixture was stirred for another 10 min at room temperature. After keeping the filtrate in air for a week, colourless block-shaped crystals were formed at the bottom of the vessel.
H atoms were placed in geometrically idealized positions and constrained to ride on their parent atoms, with C–H distances in the range 0.93–0.97 Å, N–H distances of 0.90 Å, and with Uiso(H) set at 1.2Ueq(C,N) and 1.5Ueq(methyl C). During the refinement, the displacement parameters of atom O6 were restrained to an approximate isotropic behaviour. The unit cell contains four solvent accessible voids each with a volume of 53 Å3. But no significant electron density is found in these voids.
As part of our investigations into novel urease inhibitors, we have synthesized the title compound, a new ZnII complex. The compound consists of a mononuclear zinc(II) complex cation and a nitrate anion. The Zn atom is chelated by the phenolate O and imine N atoms from two Schiff base ligands, and is coordinated by the N atom from a thiocyanate ligand, forming a trigonal-bipyramid geometry (Fig. 1). The coordinate bond lengths (Table 1) and angles are typical and are comparable with those observed in other similar zinc(II) complexes (Zhang & Wang, 2007; Adams et al., 2003). The amine N atoms of the Schiff base ligands are protonated and take no part in the coordination to the ZnII ion.
For related structures, see: Zhang & Wang (2007); Adams et al. (2003).
Data collection: SMART (Bruker, 1998); cell refinement: SAINT (Bruker, 1998); data reduction: SAINT (Bruker, 1998); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
Fig. 1. The asymmetric unit of the title compound, showing the atom-numbering scheme. Displacement ellipsoids are drawn at the 30% probability level. H atoms have been omitted for clarity. |
[Zn(NCS)(C12H18N2O2)2]NO3 | F(000) = 1320 |
Mr = 630.03 | Dx = 1.329 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 3892 reflections |
a = 10.601 (2) Å | θ = 2.3–25.5° |
b = 23.335 (3) Å | µ = 0.90 mm−1 |
c = 13.749 (2) Å | T = 298 K |
β = 112.218 (3)° | Block, colourless |
V = 3148.6 (9) Å3 | 0.20 × 0.20 × 0.18 mm |
Z = 4 |
Bruker SMART CCD area-detector diffractometer | 6818 independent reflections |
Radiation source: fine-focus sealed tube | 3644 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.139 |
ω scan | θmax = 27.0°, θmin = 1.8° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −13→13 |
Tmin = 0.841, Tmax = 0.856 | k = −29→28 |
18443 measured reflections | l = −17→15 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.059 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.157 | H-atom parameters constrained |
S = 0.91 | w = 1/[σ2(Fo2) + (0.0647P)2] where P = (Fo2 + 2Fc2)/3 |
6818 reflections | (Δ/σ)max = 0.001 |
365 parameters | Δρmax = 0.69 e Å−3 |
6 restraints | Δρmin = −0.63 e Å−3 |
[Zn(NCS)(C12H18N2O2)2]NO3 | V = 3148.6 (9) Å3 |
Mr = 630.03 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 10.601 (2) Å | µ = 0.90 mm−1 |
b = 23.335 (3) Å | T = 298 K |
c = 13.749 (2) Å | 0.20 × 0.20 × 0.18 mm |
β = 112.218 (3)° |
Bruker SMART CCD area-detector diffractometer | 6818 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 3644 reflections with I > 2σ(I) |
Tmin = 0.841, Tmax = 0.856 | Rint = 0.139 |
18443 measured reflections |
R[F2 > 2σ(F2)] = 0.059 | 6 restraints |
wR(F2) = 0.157 | H-atom parameters constrained |
S = 0.91 | Δρmax = 0.69 e Å−3 |
6818 reflections | Δρmin = −0.63 e Å−3 |
365 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Zn1 | 0.89814 (4) | 0.910567 (18) | 0.15980 (3) | 0.04957 (18) | |
N1 | 0.9386 (4) | 0.99186 (14) | 0.1129 (3) | 0.0615 (9) | |
N2 | 0.7214 (3) | 1.05264 (13) | 0.1565 (2) | 0.0540 (8) | |
H2A | 0.7686 | 1.0855 | 0.1636 | 0.065* | |
H2B | 0.7705 | 1.0288 | 0.2085 | 0.065* | |
N3 | 0.8674 (3) | 0.82940 (12) | 0.2138 (3) | 0.0520 (8) | |
N4 | 1.1307 (3) | 0.78461 (14) | 0.2169 (3) | 0.0644 (9) | |
H4A | 1.1340 | 0.7610 | 0.2695 | 0.077* | |
H4B | 1.1352 | 0.8208 | 0.2404 | 0.077* | |
N5 | 0.1534 (6) | 0.6837 (2) | 0.3942 (4) | 0.1041 (16) | |
N6 | 0.7831 (4) | 0.88758 (17) | 0.0075 (3) | 0.0770 (11) | |
O1 | 1.0989 (3) | 0.89846 (11) | 0.2324 (2) | 0.0599 (7) | |
O2 | 1.3351 (3) | 0.86419 (17) | 0.3710 (3) | 0.0830 (10) | |
O3 | 0.8145 (3) | 0.94858 (10) | 0.24990 (18) | 0.0515 (6) | |
O4 | 0.8062 (3) | 1.02305 (12) | 0.3908 (2) | 0.0574 (7) | |
O5 | 0.1139 (4) | 0.73228 (16) | 0.4024 (3) | 0.1062 (12) | |
O6 | 0.2187 (7) | 0.6552 (2) | 0.4726 (4) | 0.175 (2) | |
O7 | 0.1510 (4) | 0.66460 (16) | 0.3124 (3) | 0.1077 (13) | |
S1 | 0.65759 (17) | 0.81681 (6) | −0.16349 (11) | 0.1041 (5) | |
C1 | 1.1809 (5) | 0.9943 (2) | 0.2309 (4) | 0.0709 (13) | |
C2 | 1.1969 (4) | 0.9368 (2) | 0.2642 (3) | 0.0609 (11) | |
C3 | 1.3288 (5) | 0.9196 (3) | 0.3372 (4) | 0.0748 (14) | |
C4 | 1.4340 (6) | 0.9584 (3) | 0.3697 (5) | 0.106 (2) | |
H4 | 1.5196 | 0.9468 | 0.4160 | 0.128* | |
C5 | 1.4143 (8) | 1.0148 (4) | 0.3344 (5) | 0.124 (3) | |
H5 | 1.4868 | 1.0405 | 0.3576 | 0.149* | |
C6 | 1.2928 (7) | 1.0325 (3) | 0.2677 (4) | 0.0959 (19) | |
H6 | 1.2814 | 1.0704 | 0.2451 | 0.115* | |
C7 | 1.0547 (6) | 1.01704 (19) | 0.1556 (4) | 0.0741 (14) | |
H7 | 1.0579 | 1.0549 | 0.1353 | 0.089* | |
C8 | 0.8286 (5) | 1.0229 (2) | 0.0317 (4) | 0.0824 (15) | |
H8A | 0.8086 | 1.0040 | −0.0353 | 0.099* | |
H8B | 0.8593 | 1.0615 | 0.0261 | 0.099* | |
C9 | 0.7009 (5) | 1.02618 (19) | 0.0535 (3) | 0.0665 (12) | |
H9A | 0.6336 | 1.0483 | −0.0017 | 0.080* | |
H9B | 0.6648 | 0.9878 | 0.0516 | 0.080* | |
C10 | 0.5889 (4) | 1.0648 (2) | 0.1656 (4) | 0.0857 (15) | |
H10A | 0.5390 | 1.0922 | 0.1130 | 0.128* | |
H10B | 0.6047 | 1.0801 | 0.2341 | 0.128* | |
H10C | 0.5372 | 1.0300 | 0.1557 | 0.128* | |
C11 | 1.4620 (5) | 0.8444 (3) | 0.4510 (5) | 0.116 (2) | |
H11A | 1.4898 | 0.8705 | 0.5102 | 0.139* | |
H11B | 1.5329 | 0.8439 | 0.4225 | 0.139* | |
C12 | 1.4452 (7) | 0.7866 (3) | 0.4864 (6) | 0.146 (3) | |
H12A | 1.3661 | 0.7858 | 0.5045 | 0.219* | |
H12B | 1.5243 | 0.7767 | 0.5468 | 0.219* | |
H12C | 1.4340 | 0.7597 | 0.4310 | 0.219* | |
C13 | 0.8233 (3) | 0.86814 (17) | 0.3627 (3) | 0.0508 (9) | |
C14 | 0.8163 (3) | 0.92729 (16) | 0.3392 (3) | 0.0464 (9) | |
C15 | 0.8116 (3) | 0.96620 (18) | 0.4179 (3) | 0.0505 (10) | |
C16 | 0.8127 (4) | 0.9463 (2) | 0.5121 (3) | 0.0671 (12) | |
H16 | 0.8114 | 0.9721 | 0.5632 | 0.081* | |
C17 | 0.8156 (5) | 0.8877 (2) | 0.5319 (4) | 0.0801 (14) | |
H17 | 0.8150 | 0.8747 | 0.5957 | 0.096* | |
C18 | 0.8192 (4) | 0.8498 (2) | 0.4591 (4) | 0.0695 (12) | |
H18 | 0.8190 | 0.8108 | 0.4728 | 0.083* | |
C19 | 0.8394 (4) | 0.82363 (17) | 0.2956 (3) | 0.0559 (10) | |
H19 | 0.8281 | 0.7862 | 0.3143 | 0.067* | |
C20 | 0.8790 (4) | 0.77626 (17) | 0.1597 (4) | 0.0689 (12) | |
H20A | 0.7965 | 0.7712 | 0.0977 | 0.083* | |
H20B | 0.8866 | 0.7439 | 0.2059 | 0.083* | |
C21 | 0.9995 (4) | 0.77629 (18) | 0.1273 (3) | 0.0670 (12) | |
H21A | 1.0022 | 0.7402 | 0.0933 | 0.080* | |
H21B | 0.9881 | 0.8066 | 0.0764 | 0.080* | |
C22 | 1.2507 (5) | 0.7733 (2) | 0.1879 (4) | 0.0896 (15) | |
H22A | 1.2468 | 0.7346 | 0.1632 | 0.134* | |
H22B | 1.3331 | 0.7787 | 0.2484 | 0.134* | |
H22C | 1.2494 | 0.7993 | 0.1334 | 0.134* | |
C23 | 0.8179 (4) | 1.0643 (2) | 0.4712 (3) | 0.0668 (12) | |
H23A | 0.9029 | 1.0586 | 0.5306 | 0.080* | |
H23B | 0.7435 | 1.0594 | 0.4952 | 0.080* | |
C24 | 0.8139 (5) | 1.1231 (2) | 0.4286 (4) | 0.0909 (16) | |
H24A | 0.8793 | 1.1261 | 0.3960 | 0.136* | |
H24B | 0.8354 | 1.1504 | 0.4847 | 0.136* | |
H24C | 0.7244 | 1.1308 | 0.3775 | 0.136* | |
C25 | 0.7319 (5) | 0.85823 (19) | −0.0634 (4) | 0.0663 (12) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Zn1 | 0.0578 (3) | 0.0483 (3) | 0.0503 (3) | −0.0002 (2) | 0.0291 (2) | −0.0045 (2) |
N1 | 0.088 (3) | 0.054 (2) | 0.067 (2) | 0.003 (2) | 0.057 (2) | 0.0022 (18) |
N2 | 0.061 (2) | 0.0538 (19) | 0.0544 (19) | 0.0034 (16) | 0.0300 (17) | −0.0049 (16) |
N3 | 0.0515 (19) | 0.0462 (18) | 0.060 (2) | −0.0018 (15) | 0.0231 (17) | −0.0066 (16) |
N4 | 0.074 (2) | 0.057 (2) | 0.065 (2) | 0.0096 (18) | 0.029 (2) | −0.0055 (18) |
N5 | 0.161 (5) | 0.073 (3) | 0.075 (3) | 0.019 (3) | 0.040 (3) | 0.017 (3) |
N6 | 0.094 (3) | 0.071 (2) | 0.058 (2) | 0.009 (2) | 0.020 (2) | −0.007 (2) |
O1 | 0.0493 (16) | 0.0565 (16) | 0.0770 (19) | −0.0063 (12) | 0.0276 (15) | −0.0131 (14) |
O2 | 0.0466 (18) | 0.117 (3) | 0.082 (2) | 0.0016 (18) | 0.0202 (17) | −0.016 (2) |
O3 | 0.0676 (17) | 0.0498 (15) | 0.0483 (14) | 0.0008 (13) | 0.0346 (13) | 0.0014 (12) |
O4 | 0.0657 (18) | 0.0639 (18) | 0.0540 (16) | −0.0044 (14) | 0.0355 (14) | −0.0120 (14) |
O5 | 0.152 (3) | 0.074 (2) | 0.105 (3) | 0.027 (2) | 0.063 (3) | 0.007 (2) |
O6 | 0.280 (5) | 0.103 (3) | 0.127 (3) | 0.022 (3) | 0.057 (3) | 0.006 (3) |
O7 | 0.158 (4) | 0.098 (3) | 0.081 (2) | 0.029 (2) | 0.061 (3) | 0.000 (2) |
S1 | 0.1313 (13) | 0.0791 (9) | 0.0851 (9) | 0.0145 (8) | 0.0218 (9) | −0.0306 (8) |
C1 | 0.093 (4) | 0.082 (3) | 0.064 (3) | −0.037 (3) | 0.059 (3) | −0.028 (3) |
C2 | 0.064 (3) | 0.074 (3) | 0.063 (3) | −0.021 (2) | 0.046 (2) | −0.025 (2) |
C3 | 0.057 (3) | 0.114 (4) | 0.068 (3) | −0.027 (3) | 0.040 (3) | −0.031 (3) |
C4 | 0.076 (4) | 0.180 (7) | 0.077 (4) | −0.052 (4) | 0.046 (3) | −0.033 (4) |
C5 | 0.124 (6) | 0.189 (8) | 0.086 (4) | −0.103 (6) | 0.069 (4) | −0.050 (5) |
C6 | 0.131 (5) | 0.108 (4) | 0.081 (4) | −0.071 (4) | 0.075 (4) | −0.031 (3) |
C7 | 0.123 (4) | 0.052 (3) | 0.086 (3) | −0.013 (3) | 0.084 (4) | −0.010 (3) |
C8 | 0.125 (4) | 0.071 (3) | 0.077 (3) | 0.025 (3) | 0.067 (3) | 0.017 (3) |
C9 | 0.084 (3) | 0.067 (3) | 0.052 (2) | 0.016 (2) | 0.030 (2) | −0.007 (2) |
C10 | 0.068 (3) | 0.116 (4) | 0.081 (3) | 0.021 (3) | 0.037 (3) | −0.012 (3) |
C11 | 0.057 (3) | 0.181 (7) | 0.100 (4) | 0.009 (4) | 0.018 (3) | −0.027 (5) |
C12 | 0.107 (5) | 0.160 (7) | 0.141 (6) | 0.053 (5) | 0.012 (5) | 0.010 (6) |
C13 | 0.038 (2) | 0.064 (3) | 0.054 (2) | 0.0025 (18) | 0.0217 (18) | 0.010 (2) |
C14 | 0.0313 (19) | 0.062 (2) | 0.050 (2) | −0.0002 (17) | 0.0201 (17) | −0.0017 (19) |
C15 | 0.036 (2) | 0.073 (3) | 0.049 (2) | 0.0034 (18) | 0.0226 (18) | −0.001 (2) |
C16 | 0.059 (3) | 0.102 (4) | 0.046 (2) | 0.011 (2) | 0.026 (2) | 0.002 (2) |
C17 | 0.078 (3) | 0.117 (4) | 0.057 (3) | 0.028 (3) | 0.038 (3) | 0.030 (3) |
C18 | 0.064 (3) | 0.080 (3) | 0.072 (3) | 0.021 (2) | 0.034 (2) | 0.030 (3) |
C19 | 0.046 (2) | 0.050 (2) | 0.069 (3) | −0.0051 (18) | 0.020 (2) | 0.009 (2) |
C20 | 0.076 (3) | 0.047 (2) | 0.084 (3) | −0.008 (2) | 0.030 (3) | −0.014 (2) |
C21 | 0.079 (3) | 0.052 (2) | 0.072 (3) | 0.003 (2) | 0.031 (3) | −0.020 (2) |
C22 | 0.084 (3) | 0.098 (4) | 0.099 (4) | 0.014 (3) | 0.049 (3) | −0.020 (3) |
C23 | 0.053 (3) | 0.089 (3) | 0.060 (3) | −0.002 (2) | 0.023 (2) | −0.026 (3) |
C24 | 0.104 (4) | 0.082 (4) | 0.105 (4) | −0.024 (3) | 0.060 (3) | −0.040 (3) |
C25 | 0.078 (3) | 0.061 (3) | 0.059 (3) | 0.018 (2) | 0.024 (2) | 0.001 (2) |
Zn1—O3 | 1.985 (2) | C8—C9 | 1.495 (6) |
Zn1—O1 | 1.999 (3) | C8—H8A | 0.97 |
Zn1—N6 | 2.056 (4) | C8—H8B | 0.97 |
Zn1—N1 | 2.100 (3) | C9—H9A | 0.97 |
Zn1—N3 | 2.104 (3) | C9—H9B | 0.97 |
N1—C7 | 1.288 (6) | C10—H10A | 0.96 |
N1—C8 | 1.465 (5) | C10—H10B | 0.96 |
N2—C9 | 1.484 (5) | C10—H10C | 0.96 |
N2—C10 | 1.485 (5) | C11—C12 | 1.466 (8) |
N2—H2A | 0.90 | C11—H11A | 0.97 |
N2—H2B | 0.90 | C11—H11B | 0.97 |
N3—C19 | 1.274 (5) | C12—H12A | 0.96 |
N3—C20 | 1.475 (5) | C12—H12B | 0.96 |
N4—C21 | 1.481 (5) | C12—H12C | 0.96 |
N4—C22 | 1.494 (5) | C13—C18 | 1.410 (6) |
N4—H4A | 0.90 | C13—C14 | 1.413 (5) |
N4—H4B | 0.90 | C13—C19 | 1.442 (5) |
N5—O7 | 1.201 (5) | C14—C15 | 1.428 (5) |
N5—O5 | 1.229 (5) | C15—C16 | 1.373 (5) |
N5—O6 | 1.232 (6) | C16—C17 | 1.392 (6) |
N6—C25 | 1.147 (5) | C16—H16 | 0.93 |
O1—C2 | 1.315 (4) | C17—C18 | 1.347 (6) |
O2—C3 | 1.368 (6) | C17—H17 | 0.93 |
O2—C11 | 1.454 (6) | C18—H18 | 0.93 |
O3—C14 | 1.318 (4) | C19—H19 | 0.93 |
O4—C15 | 1.373 (5) | C20—C21 | 1.504 (6) |
O4—C23 | 1.435 (4) | C20—H20A | 0.97 |
S1—C25 | 1.621 (5) | C20—H20B | 0.97 |
C1—C2 | 1.407 (6) | C21—H21A | 0.97 |
C1—C6 | 1.416 (6) | C21—H21B | 0.97 |
C1—C7 | 1.448 (7) | C22—H22A | 0.96 |
C2—C3 | 1.435 (6) | C22—H22B | 0.96 |
C3—C4 | 1.373 (7) | C22—H22C | 0.96 |
C4—C5 | 1.392 (9) | C23—C24 | 1.486 (6) |
C4—H4 | 0.93 | C23—H23A | 0.97 |
C5—C6 | 1.334 (9) | C23—H23B | 0.97 |
C5—H5 | 0.93 | C24—H24A | 0.96 |
C6—H6 | 0.93 | C24—H24B | 0.96 |
C7—H7 | 0.93 | C24—H24C | 0.96 |
O3—Zn1—O1 | 113.20 (11) | N2—C10—H10B | 109.5 |
O3—Zn1—N6 | 121.28 (14) | H10A—C10—H10B | 109.5 |
O1—Zn1—N6 | 125.52 (14) | N2—C10—H10C | 109.5 |
O3—Zn1—N1 | 88.83 (11) | H10A—C10—H10C | 109.5 |
O1—Zn1—N1 | 88.76 (13) | H10B—C10—H10C | 109.5 |
N6—Zn1—N1 | 91.96 (15) | O2—C11—C12 | 110.4 (5) |
O3—Zn1—N3 | 90.95 (11) | O2—C11—H11A | 109.6 |
O1—Zn1—N3 | 88.52 (11) | C12—C11—H11A | 109.6 |
N6—Zn1—N3 | 90.76 (14) | O2—C11—H11B | 109.6 |
N1—Zn1—N3 | 176.95 (14) | C12—C11—H11B | 109.6 |
C7—N1—C8 | 118.1 (4) | H11A—C11—H11B | 108.1 |
C7—N1—Zn1 | 122.9 (3) | C11—C12—H12A | 109.5 |
C8—N1—Zn1 | 119.0 (3) | C11—C12—H12B | 109.5 |
C9—N2—C10 | 111.0 (3) | H12A—C12—H12B | 109.5 |
C9—N2—H2A | 109.4 | C11—C12—H12C | 109.5 |
C10—N2—H2A | 109.4 | H12A—C12—H12C | 109.5 |
C9—N2—H2B | 109.4 | H12B—C12—H12C | 109.5 |
C10—N2—H2B | 109.4 | C18—C13—C14 | 119.6 (4) |
H2A—N2—H2B | 108.0 | C18—C13—C19 | 115.9 (4) |
C19—N3—C20 | 116.6 (3) | C14—C13—C19 | 124.5 (4) |
C19—N3—Zn1 | 121.7 (3) | O3—C14—C13 | 124.2 (3) |
C20—N3—Zn1 | 121.7 (3) | O3—C14—C15 | 118.3 (3) |
C21—N4—C22 | 112.4 (3) | C13—C14—C15 | 117.5 (4) |
C21—N4—H4A | 109.1 | C16—C15—O4 | 124.6 (4) |
C22—N4—H4A | 109.1 | C16—C15—C14 | 120.6 (4) |
C21—N4—H4B | 109.1 | O4—C15—C14 | 114.8 (3) |
C22—N4—H4B | 109.1 | C15—C16—C17 | 120.6 (4) |
H4A—N4—H4B | 107.9 | C15—C16—H16 | 119.7 |
O7—N5—O5 | 122.7 (5) | C17—C16—H16 | 119.7 |
O7—N5—O6 | 115.1 (5) | C18—C17—C16 | 120.3 (4) |
O5—N5—O6 | 121.1 (5) | C18—C17—H17 | 119.9 |
C25—N6—Zn1 | 158.4 (4) | C16—C17—H17 | 119.9 |
C2—O1—Zn1 | 128.9 (3) | C17—C18—C13 | 121.3 (4) |
C3—O2—C11 | 118.1 (4) | C17—C18—H18 | 119.4 |
C14—O3—Zn1 | 124.1 (2) | C13—C18—H18 | 119.4 |
C15—O4—C23 | 117.2 (3) | N3—C19—C13 | 127.7 (4) |
C2—C1—C6 | 120.2 (5) | N3—C19—H19 | 116.1 |
C2—C1—C7 | 123.2 (4) | C13—C19—H19 | 116.1 |
C6—C1—C7 | 116.6 (5) | N3—C20—C21 | 113.0 (3) |
O1—C2—C1 | 123.9 (4) | N3—C20—H20A | 109.0 |
O1—C2—C3 | 118.8 (4) | C21—C20—H20A | 109.0 |
C1—C2—C3 | 117.3 (4) | N3—C20—H20B | 109.0 |
O2—C3—C4 | 125.6 (6) | C21—C20—H20B | 109.0 |
O2—C3—C2 | 114.3 (4) | H20A—C20—H20B | 107.8 |
C4—C3—C2 | 120.1 (6) | N4—C21—C20 | 112.9 (4) |
C3—C4—C5 | 120.9 (6) | N4—C21—H21A | 109.0 |
C3—C4—H4 | 119.6 | C20—C21—H21A | 109.0 |
C5—C4—H4 | 119.6 | N4—C21—H21B | 109.0 |
C6—C5—C4 | 120.8 (6) | C20—C21—H21B | 109.0 |
C6—C5—H5 | 119.6 | H21A—C21—H21B | 107.8 |
C4—C5—H5 | 119.6 | N4—C22—H22A | 109.5 |
C5—C6—C1 | 120.8 (6) | N4—C22—H22B | 109.5 |
C5—C6—H6 | 119.6 | H22A—C22—H22B | 109.5 |
C1—C6—H6 | 119.6 | N4—C22—H22C | 109.5 |
N1—C7—C1 | 128.6 (4) | H22A—C22—H22C | 109.5 |
N1—C7—H7 | 115.7 | H22B—C22—H22C | 109.5 |
C1—C7—H7 | 115.7 | O4—C23—C24 | 109.5 (3) |
N1—C8—C9 | 113.2 (4) | O4—C23—H23A | 109.8 |
N1—C8—H8A | 108.9 | C24—C23—H23A | 109.8 |
C9—C8—H8A | 108.9 | O4—C23—H23B | 109.8 |
N1—C8—H8B | 108.9 | C24—C23—H23B | 109.8 |
C9—C8—H8B | 108.9 | H23A—C23—H23B | 108.2 |
H8A—C8—H8B | 107.8 | C23—C24—H24A | 109.5 |
N2—C9—C8 | 113.3 (4) | C23—C24—H24B | 109.5 |
N2—C9—H9A | 108.9 | H24A—C24—H24B | 109.5 |
C8—C9—H9A | 108.9 | C23—C24—H24C | 109.5 |
N2—C9—H9B | 108.9 | H24A—C24—H24C | 109.5 |
C8—C9—H9B | 108.9 | H24B—C24—H24C | 109.5 |
H9A—C9—H9B | 107.7 | N6—C25—S1 | 179.2 (5) |
N2—C10—H10A | 109.5 |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2B···O3 | 0.90 | 1.96 | 2.750 (4) | 145 |
N2—H2B···O4 | 0.90 | 2.39 | 3.078 (4) | 133 |
N4—H4B···O1 | 0.90 | 1.85 | 2.697 (4) | 157 |
N4—H4B···O2 | 0.90 | 2.42 | 3.027 (5) | 125 |
N2—H2A···O7i | 0.90 | 2.01 | 2.898 (5) | 170 |
N2—H2A···O6i | 0.90 | 2.52 | 3.183 (6) | 131 |
N4—H4A···O5ii | 0.90 | 2.03 | 2.894 (5) | 160 |
N4—H4A···O7ii | 0.90 | 2.31 | 3.066 (5) | 141 |
Symmetry codes: (i) −x+1, y+1/2, −z+1/2; (ii) x+1, y, z. |
Experimental details
Crystal data | |
Chemical formula | [Zn(NCS)(C12H18N2O2)2]NO3 |
Mr | 630.03 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 298 |
a, b, c (Å) | 10.601 (2), 23.335 (3), 13.749 (2) |
β (°) | 112.218 (3) |
V (Å3) | 3148.6 (9) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.90 |
Crystal size (mm) | 0.20 × 0.20 × 0.18 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.841, 0.856 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 18443, 6818, 3644 |
Rint | 0.139 |
(sin θ/λ)max (Å−1) | 0.639 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.059, 0.157, 0.91 |
No. of reflections | 6818 |
No. of parameters | 365 |
No. of restraints | 6 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.69, −0.63 |
Computer programs: SMART (Bruker, 1998), SAINT (Bruker, 1998), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
Zn1—O3 | 1.985 (2) | Zn1—N1 | 2.100 (3) |
Zn1—O1 | 1.999 (3) | Zn1—N3 | 2.104 (3) |
Zn1—N6 | 2.056 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2B···O3 | 0.90 | 1.96 | 2.750 (4) | 145 |
N2—H2B···O4 | 0.90 | 2.39 | 3.078 (4) | 133 |
N4—H4B···O1 | 0.90 | 1.85 | 2.697 (4) | 157 |
N4—H4B···O2 | 0.90 | 2.42 | 3.027 (5) | 125 |
N2—H2A···O7i | 0.90 | 2.01 | 2.898 (5) | 170 |
N2—H2A···O6i | 0.90 | 2.52 | 3.183 (6) | 131 |
N4—H4A···O5ii | 0.90 | 2.03 | 2.894 (5) | 160 |
N4—H4A···O7ii | 0.90 | 2.31 | 3.066 (5) | 141 |
Symmetry codes: (i) −x+1, y+1/2, −z+1/2; (ii) x+1, y, z. |
As part of our investigations into novel urease inhibitors, we have synthesized the title compound, a new ZnII complex. The compound consists of a mononuclear zinc(II) complex cation and a nitrate anion. The Zn atom is chelated by the phenolate O and imine N atoms from two Schiff base ligands, and is coordinated by the N atom from a thiocyanate ligand, forming a trigonal-bipyramid geometry (Fig. 1). The coordinate bond lengths (Table 1) and angles are typical and are comparable with those observed in other similar zinc(II) complexes (Zhang & Wang, 2007; Adams et al., 2003). The amine N atoms of the Schiff base ligands are protonated and take no part in the coordination to the ZnII ion.