In the structure of [Co(C
5H
5N)(H
2O)
3SO
4]
n, a one-dimensional coordination polymer, each Co
II atom is octahedrally coordinated by two O atoms of two different sulfate ions, a pyridine molecule and three water molecules. The polymeric chains are connected by weak intermolecular O—H
O hydrogen-bonding interactions to give a two-dimensional structure.
Supporting information
CCDC reference: 221142
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean (C-C) = 0.004 Å
- R factor = 0.023
- wR factor = 0.053
- Data-to-parameter ratio = 12.3
checkCIF/PLATON results
No syntax errors found
Alert level C
PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ?
Alert level G
FORMU01_ALERT_1_G There is a discrepancy between the atom counts in the
_chemical_formula_sum and _chemical_formula_moiety. This is
usually due to the moiety formula being in the wrong format.
Atom count from _chemical_formula_sum: C5 H11 Co1 N1 O7 S1
Atom count from _chemical_formula_moiety:
0 ALERT level A = In general: serious problem
0 ALERT level B = Potentially serious problem
1 ALERT level C = Check and explain
1 ALERT level G = General alerts; check
2 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
0 ALERT type 2 Indicator that the structure model may be wrong or deficient
0 ALERT type 3 Indicator that the structure quality may be low
0 ALERT type 4 Improvement, methodology, query or suggestion
Data collection: SMART (Bruker, 1998); cell refinement: SMART; data reduction: SAINT (Bruker, 1998); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997b); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997b); molecular graphics: SHELXTL (Sheldrick, 1997a); software used to prepare material for publication: SHELXTL.
Crystal data top
[Co(SO4)(C5H5N)(H2O)3] | F(000) = 588 |
Mr = 288.14 | Dx = 1.948 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 642 reflections |
a = 11.951 (4) Å | θ = 3.2–19.9° |
b = 7.639 (2) Å | µ = 1.98 mm−1 |
c = 11.507 (4) Å | T = 293 K |
β = 110.711 (4)° | Block, red |
V = 982.7 (5) Å3 | 0.30 × 0.20 × 0.20 mm |
Z = 4 | |
Data collection top
Bruker SMART CCD area-detector diffractometer | 1988 independent reflections |
Radiation source: fine-focus sealed tube | 1710 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.024 |
ω scans | θmax = 26.4°, θmin = 3.2° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −14→14 |
Tmin = 0.599, Tmax = 0.674 | k = −9→8 |
5362 measured reflections | l = −9→14 |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.023 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.053 | w = 1/[σ2(Fo2) + (0.0208P)2 + 0.4534P] where P = (Fo2 + 2Fc2)/3 |
S = 1.04 | (Δ/σ)max < 0.001 |
1988 reflections | Δρmax = 0.29 e Å−3 |
161 parameters | Δρmin = −0.31 e Å−3 |
6 restraints | Extinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0271 (15) |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Co1 | 0.34920 (2) | 0.09860 (3) | 0.28966 (2) | 0.01668 (11) | |
C1 | 0.0948 (2) | 0.1659 (3) | 0.1201 (2) | 0.0401 (6) | |
H1A | 0.1322 | 0.1930 | 0.0640 | 0.048* | |
C2 | −0.0286 (2) | 0.1750 (4) | 0.0807 (3) | 0.0552 (8) | |
H2A | −0.0730 | 0.2070 | −0.0006 | 0.066* | |
C3 | −0.0847 (2) | 0.1366 (4) | 0.1622 (3) | 0.0575 (8) | |
H3A | −0.1676 | 0.1420 | 0.1375 | 0.069* | |
C4 | −0.0167 (2) | 0.0900 (4) | 0.2809 (3) | 0.0531 (8) | |
H4A | −0.0527 | 0.0631 | 0.3383 | 0.064* | |
C5 | 0.1058 (2) | 0.0832 (3) | 0.3143 (3) | 0.0400 (6) | |
H5A | 0.1514 | 0.0519 | 0.3954 | 0.048* | |
N1 | 0.16198 (15) | 0.1198 (2) | 0.23527 (17) | 0.0274 (4) | |
O1 | 0.35842 (12) | 0.32220 (17) | 0.18198 (12) | 0.0231 (3) | |
O2 | 0.26652 (13) | 0.60709 (19) | 0.15420 (15) | 0.0321 (4) | |
O3 | 0.46284 (11) | 0.57460 (18) | 0.14977 (12) | 0.0217 (3) | |
O4 | 0.43033 (13) | 0.53829 (19) | 0.34286 (13) | 0.0274 (3) | |
O5 | 0.32967 (14) | −0.04913 (19) | 0.12827 (13) | 0.0256 (3) | |
O6 | 0.37299 (15) | 0.24955 (19) | 0.44664 (14) | 0.0292 (3) | |
O7 | 0.35009 (13) | −0.12629 (19) | 0.39569 (13) | 0.0230 (3) | |
S1 | 0.37771 (4) | 0.51107 (6) | 0.20813 (4) | 0.01653 (13) | |
H7A | 0.368 (2) | −0.219 (2) | 0.373 (2) | 0.042 (8)* | |
H6B | 0.376 (2) | 0.232 (3) | 0.5182 (12) | 0.049 (8)* | |
H5C | 0.3935 (16) | −0.058 (4) | 0.117 (3) | 0.061 (10)* | |
H6A | 0.391 (2) | 0.3498 (18) | 0.439 (3) | 0.052 (9)* | |
H5B | 0.310 (2) | −0.1519 (17) | 0.132 (3) | 0.048 (8)* | |
H7B | 0.387 (2) | −0.116 (4) | 0.4697 (11) | 0.051 (9)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Co1 | 0.01785 (15) | 0.01505 (15) | 0.01715 (15) | 0.00038 (10) | 0.00618 (10) | −0.00008 (10) |
C1 | 0.0288 (12) | 0.0475 (14) | 0.0380 (14) | 0.0038 (11) | 0.0045 (10) | 0.0005 (12) |
C2 | 0.0297 (13) | 0.0629 (18) | 0.0561 (17) | 0.0097 (13) | −0.0057 (13) | −0.0039 (15) |
C3 | 0.0217 (12) | 0.0521 (17) | 0.094 (2) | 0.0065 (12) | 0.0152 (14) | −0.0044 (16) |
C4 | 0.0362 (14) | 0.0506 (16) | 0.084 (2) | 0.0019 (12) | 0.0351 (15) | 0.0029 (16) |
C5 | 0.0328 (12) | 0.0449 (15) | 0.0470 (15) | 0.0044 (11) | 0.0201 (11) | 0.0052 (12) |
N1 | 0.0216 (9) | 0.0257 (9) | 0.0333 (10) | 0.0015 (7) | 0.0079 (8) | 0.0006 (8) |
O1 | 0.0364 (8) | 0.0131 (7) | 0.0207 (7) | −0.0020 (6) | 0.0113 (6) | −0.0011 (6) |
O2 | 0.0250 (7) | 0.0259 (8) | 0.0494 (10) | 0.0087 (6) | 0.0181 (7) | 0.0081 (7) |
O3 | 0.0198 (7) | 0.0278 (7) | 0.0184 (7) | −0.0034 (6) | 0.0080 (5) | 0.0024 (6) |
O4 | 0.0427 (9) | 0.0238 (7) | 0.0196 (7) | −0.0089 (6) | 0.0160 (6) | −0.0053 (6) |
O5 | 0.0302 (9) | 0.0195 (8) | 0.0253 (8) | 0.0003 (6) | 0.0075 (7) | −0.0024 (6) |
O6 | 0.0517 (10) | 0.0195 (8) | 0.0209 (8) | −0.0057 (7) | 0.0185 (7) | −0.0018 (6) |
O7 | 0.0297 (8) | 0.0196 (8) | 0.0192 (7) | 0.0009 (6) | 0.0079 (6) | −0.0012 (6) |
S1 | 0.0197 (2) | 0.0131 (2) | 0.0195 (2) | −0.00078 (17) | 0.01018 (18) | −0.00060 (18) |
Geometric parameters (Å, º) top
Co1—O6 | 2.0762 (16) | C4—H4A | 0.93 |
Co1—O7 | 2.1050 (15) | C5—N1 | 1.338 (3) |
Co1—N1 | 2.1056 (18) | C5—H5A | 0.93 |
Co1—O3i | 2.1114 (14) | O1—S1 | 1.4752 (14) |
Co1—O5 | 2.1144 (16) | O2—S1 | 1.4511 (15) |
Co1—O1 | 2.1358 (14) | O3—S1 | 1.4849 (14) |
C1—N1 | 1.332 (3) | O3—Co1ii | 2.1114 (14) |
C1—C2 | 1.383 (3) | O4—S1 | 1.4673 (15) |
C1—H1A | 0.93 | O5—H5C | 0.82 (1) |
C2—C3 | 1.363 (4) | O5—H5B | 0.82 (1) |
C2—H2A | 0.93 | O6—H6B | 0.82 (1) |
C3—C4 | 1.367 (4) | O6—H6A | 0.81 (1) |
C3—H3A | 0.93 | O7—H7A | 0.81 (1) |
C4—C5 | 1.377 (4) | O7—H7B | 0.81 (1) |
| | | |
O6—Co1—O7 | 88.73 (6) | C3—C4—H4A | 120.4 |
O6—Co1—N1 | 91.15 (7) | C5—C4—H4A | 120.4 |
O7—Co1—N1 | 91.26 (6) | N1—C5—C4 | 122.8 (3) |
O6—Co1—O3i | 87.63 (6) | N1—C5—H5A | 118.6 |
O7—Co1—O3i | 87.19 (5) | C4—C5—H5A | 118.6 |
N1—Co1—O3i | 178.05 (6) | C1—N1—C5 | 117.5 (2) |
O6—Co1—O5 | 177.86 (6) | C1—N1—Co1 | 121.32 (16) |
O7—Co1—O5 | 92.86 (6) | C5—N1—Co1 | 121.21 (16) |
N1—Co1—O5 | 90.25 (7) | S1—O1—Co1 | 134.44 (8) |
O3i—Co1—O5 | 91.01 (6) | S1—O3—Co1ii | 134.28 (8) |
O6—Co1—O1 | 92.37 (6) | Co1—O5—H5C | 112 (2) |
O7—Co1—O1 | 176.61 (6) | Co1—O5—H5B | 114.1 (19) |
N1—Co1—O1 | 91.92 (6) | H5C—O5—H5B | 103 (3) |
O3i—Co1—O1 | 89.65 (5) | Co1—O6—H6B | 136.4 (19) |
O5—Co1—O1 | 85.96 (6) | Co1—O6—H6A | 113 (2) |
N1—C1—C2 | 122.5 (3) | H6B—O6—H6A | 110 (3) |
N1—C1—H1A | 118.7 | Co1—O7—H7A | 118.1 (19) |
C2—C1—H1A | 118.7 | Co1—O7—H7B | 115 (2) |
C3—C2—C1 | 119.4 (3) | H7A—O7—H7B | 108 (3) |
C3—C2—H2A | 120.3 | O2—S1—O4 | 111.45 (9) |
C1—C2—H2A | 120.3 | O2—S1—O1 | 110.71 (9) |
C2—C3—C4 | 118.7 (2) | O4—S1—O1 | 109.38 (8) |
C2—C3—H3A | 120.6 | O2—S1—O3 | 108.16 (9) |
C4—C3—H3A | 120.6 | O4—S1—O3 | 108.99 (8) |
C3—C4—C5 | 119.1 (3) | O1—S1—O3 | 108.06 (8) |
| | | |
N1—C1—C2—C3 | 0.4 (4) | O7—Co1—N1—C5 | 37.84 (18) |
C1—C2—C3—C4 | 0.0 (4) | O5—Co1—N1—C5 | 130.71 (18) |
C2—C3—C4—C5 | 0.0 (4) | O1—Co1—N1—C5 | −143.32 (18) |
C3—C4—C5—N1 | −0.3 (4) | O6—Co1—O1—S1 | 1.58 (12) |
C2—C1—N1—C5 | −0.7 (4) | N1—Co1—O1—S1 | 92.81 (12) |
C2—C1—N1—Co1 | 177.7 (2) | O3i—Co1—O1—S1 | −86.03 (12) |
C4—C5—N1—C1 | 0.6 (4) | O5—Co1—O1—S1 | −177.07 (12) |
C4—C5—N1—Co1 | −177.78 (19) | Co1—O1—S1—O2 | −105.40 (13) |
O6—Co1—N1—C1 | 130.75 (18) | Co1—O1—S1—O4 | 17.79 (14) |
O7—Co1—N1—C1 | −140.50 (18) | Co1—O1—S1—O3 | 136.32 (11) |
O5—Co1—N1—C1 | −47.63 (18) | Co1ii—O3—S1—O2 | 149.50 (11) |
O1—Co1—N1—C1 | 38.33 (18) | Co1ii—O3—S1—O4 | 28.18 (14) |
O6—Co1—N1—C5 | −50.91 (18) | Co1ii—O3—S1—O1 | −90.60 (12) |
Symmetry codes: (i) −x+1, y−1/2, −z+1/2; (ii) −x+1, y+1/2, −z+1/2. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O5—H5B···O2iii | 0.82 (1) | 1.95 (2) | 2.777 (2) | 176 (3) |
O5—H5C···O4i | 0.82 (1) | 2.12 (2) | 2.848 (3) | 148 (3) |
O6—H6A···O4 | 0.81 (1) | 1.97 (2) | 2.709 (2) | 151 (3) |
O6—H6B···O1iv | 0.82 (1) | 2.01 (2) | 2.828 (2) | 172 (2) |
O7—H7A···O4iii | 0.81 (1) | 2.07 (2) | 2.875 (2) | 171 (2) |
O7—H7B···O3iv | 0.81 (1) | 1.97 (1) | 2.781 (2) | 174 (2) |
Symmetry codes: (i) −x+1, y−1/2, −z+1/2; (iii) x, y−1, z; (iv) x, −y+1/2, z+1/2. |