Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S160053680503076X/cv6577sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S160053680503076X/cv6577Isup2.hkl |
CCDC reference: 287542
All chemicals used for the preparation of compound (I) were of reagent grade quality. N-(4-Chlorophenyl)-N'-(4-nitrobenzoyl)thiourea was obtained in CH2Cl2 using the known method (Su, Liu et al., 2005). The thiourea ligand and cupric chloride were dissolved in ethanol. The two solutions were mixed and heated for a while with stirring, and a yellow product was obtained as deposition. Single crystals were obtained after one week by slow evaporation of a mixed solution of dimethyl sulphoxide with acetone in a 1:1 ratio heated for 10 min. Yield 28%. Analysis required for C14H10ClN3O4: C 52.55, H 3.13, N 13.15%; found: C 50.04, H 2.59, N 13.13%. IR (cm−1): 3131 (NH), 1701 (C═O), 1596, 1525, 1499 (C═C), 1346, 1270, 1227, 1091, 831, 723, 511. 1H NMR: 7.38–7.70 (m, 4H, Cl—C6H4), 8.14–8.34 (m, 4H, NO2—C6H4), 10.64 (s, 1H, NH), 11.39 (s, 1H, NH).
The C-bound H atoms were positioned geometrically and allowed to ride on their parent atoms, with C—H = 0.93 Å and Uiso(H) = 1.2Ueq(C). The amine atoms H1 and H2 were located in a difference Fourier map and refined isotropically with a restrained N—H distance of 0.87 (1) Å.
Data collection: SMART (Bruker, 2000); cell refinement: SAINT (Bruker, 2000); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Bruker, 2000); software used to prepare material for publication: SHELXTL.
C14H10ClN3O4 | Z = 2 |
Mr = 319.70 | F(000) = 328 |
Triclinic, P1 | Dx = 1.558 Mg m−3 |
a = 7.1737 (10) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 8.2486 (12) Å | Cell parameters from 1727 reflections |
c = 12.1873 (17) Å | θ = 2.5–27.7° |
α = 91.418 (2)° | µ = 0.30 mm−1 |
β = 106.157 (2)° | T = 293 K |
γ = 99.400 (2)° | Block, yellow |
V = 681.50 (17) Å3 | 0.26 × 0.24 × 0.18 mm |
Bruker SMART CCD area-detector diffractometer | 2368 independent reflections |
Radiation source: fine-focus sealed tube | 1941 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.009 |
ϕ and ω scans | θmax = 25.0°, θmin = 2.5° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −8→8 |
Tmin = 0.911, Tmax = 0.947 | k = −9→8 |
3693 measured reflections | l = −10→14 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.033 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.088 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0423P)2 + 0.161P] where P = (Fo2 + 2Fc2)/3 |
2368 reflections | (Δ/σ)max < 0.001 |
207 parameters | Δρmax = 0.26 e Å−3 |
2 restraints | Δρmin = −0.21 e Å−3 |
C14H10ClN3O4 | γ = 99.400 (2)° |
Mr = 319.70 | V = 681.50 (17) Å3 |
Triclinic, P1 | Z = 2 |
a = 7.1737 (10) Å | Mo Kα radiation |
b = 8.2486 (12) Å | µ = 0.30 mm−1 |
c = 12.1873 (17) Å | T = 293 K |
α = 91.418 (2)° | 0.26 × 0.24 × 0.18 mm |
β = 106.157 (2)° |
Bruker SMART CCD area-detector diffractometer | 2368 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1941 reflections with I > 2σ(I) |
Tmin = 0.911, Tmax = 0.947 | Rint = 0.009 |
3693 measured reflections |
R[F2 > 2σ(F2)] = 0.033 | 2 restraints |
wR(F2) = 0.088 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | Δρmax = 0.26 e Å−3 |
2368 reflections | Δρmin = −0.21 e Å−3 |
207 parameters |
Experimental. The IR spectrum was recorded on a Nicolet NEXUS 670 F T–IR spectrophotometer using KBr discs. 1H NMR spectra were recorded on an Advance 300 Bruker spectrometer with DMSO-d6 as solvent. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | 1.28679 (9) | −0.00089 (7) | 0.27008 (5) | 0.0716 (2) | |
N1 | 0.9143 (2) | 0.32409 (17) | 0.56999 (12) | 0.0412 (3) | |
H1 | 0.984 (2) | 0.337 (2) | 0.6415 (9) | 0.050 (5)* | |
N2 | 0.70475 (19) | 0.46082 (17) | 0.63786 (11) | 0.0395 (3) | |
H2 | 0.5996 (18) | 0.5037 (19) | 0.6185 (14) | 0.044 (5)* | |
N3 | 0.5108 (2) | 0.8111 (2) | 1.06294 (14) | 0.0567 (4) | |
O1 | 0.64018 (16) | 0.39301 (16) | 0.44858 (9) | 0.0496 (3) | |
O2 | 0.97614 (18) | 0.44473 (16) | 0.78491 (10) | 0.0534 (3) | |
O3 | 0.3401 (2) | 0.8288 (2) | 1.03227 (15) | 0.0918 (6) | |
O4 | 0.6206 (3) | 0.8557 (2) | 1.15750 (13) | 0.0884 (5) | |
C1 | 0.7506 (2) | 0.39051 (19) | 0.54468 (14) | 0.0367 (4) | |
C2 | 0.8153 (2) | 0.4858 (2) | 0.74984 (14) | 0.0399 (4) | |
C3 | 0.9940 (2) | 0.24722 (19) | 0.49319 (14) | 0.0377 (4) | |
C4 | 1.1752 (2) | 0.2006 (2) | 0.54013 (15) | 0.0436 (4) | |
H4 | 1.2364 | 0.2206 | 0.6184 | 0.052* | |
C5 | 1.2654 (3) | 0.1254 (2) | 0.47245 (17) | 0.0494 (4) | |
H5 | 1.3874 | 0.0954 | 0.5045 | 0.059* | |
C6 | 1.1737 (3) | 0.0946 (2) | 0.35684 (16) | 0.0488 (4) | |
C7 | 0.9928 (3) | 0.1375 (2) | 0.30907 (16) | 0.0490 (4) | |
H7 | 0.9313 | 0.1149 | 0.2310 | 0.059* | |
C8 | 0.9018 (3) | 0.2141 (2) | 0.37664 (15) | 0.0452 (4) | |
H8 | 0.7795 | 0.2432 | 0.3442 | 0.054* | |
C9 | 0.7284 (2) | 0.5695 (2) | 0.82916 (13) | 0.0385 (4) | |
C10 | 0.8574 (2) | 0.6555 (2) | 0.92800 (14) | 0.0466 (4) | |
H10 | 0.9923 | 0.6585 | 0.9426 | 0.056* | |
C11 | 0.7882 (3) | 0.7360 (2) | 1.00432 (15) | 0.0481 (4) | |
H11 | 0.8744 | 0.7947 | 1.0700 | 0.058* | |
C12 | 0.5877 (3) | 0.7274 (2) | 0.98081 (14) | 0.0423 (4) | |
C13 | 0.4555 (2) | 0.6416 (2) | 0.88505 (14) | 0.0456 (4) | |
H13 | 0.3206 | 0.6373 | 0.8718 | 0.055* | |
C14 | 0.5269 (2) | 0.5619 (2) | 0.80906 (14) | 0.0433 (4) | |
H14 | 0.4396 | 0.5028 | 0.7439 | 0.052* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0941 (4) | 0.0647 (3) | 0.0800 (4) | 0.0300 (3) | 0.0551 (3) | 0.0010 (3) |
N1 | 0.0419 (8) | 0.0512 (8) | 0.0315 (8) | 0.0163 (6) | 0.0081 (6) | −0.0021 (6) |
N2 | 0.0354 (7) | 0.0516 (8) | 0.0326 (7) | 0.0155 (6) | 0.0076 (6) | −0.0017 (6) |
N3 | 0.0609 (10) | 0.0644 (10) | 0.0475 (10) | 0.0091 (8) | 0.0221 (8) | −0.0095 (8) |
O1 | 0.0422 (6) | 0.0732 (8) | 0.0343 (7) | 0.0217 (6) | 0.0069 (5) | −0.0051 (6) |
O2 | 0.0470 (7) | 0.0749 (9) | 0.0390 (7) | 0.0286 (6) | 0.0038 (5) | −0.0030 (6) |
O3 | 0.0607 (10) | 0.1333 (15) | 0.0851 (12) | 0.0265 (10) | 0.0255 (8) | −0.0387 (10) |
O4 | 0.0854 (11) | 0.1217 (14) | 0.0521 (9) | 0.0138 (10) | 0.0162 (8) | −0.0392 (9) |
C1 | 0.0343 (8) | 0.0402 (9) | 0.0352 (9) | 0.0058 (7) | 0.0103 (7) | −0.0012 (7) |
C2 | 0.0394 (9) | 0.0438 (9) | 0.0360 (9) | 0.0100 (7) | 0.0087 (7) | 0.0012 (7) |
C3 | 0.0404 (8) | 0.0351 (8) | 0.0393 (9) | 0.0057 (7) | 0.0150 (7) | 0.0016 (7) |
C4 | 0.0434 (9) | 0.0431 (9) | 0.0446 (10) | 0.0119 (7) | 0.0110 (7) | 0.0001 (7) |
C5 | 0.0471 (10) | 0.0448 (10) | 0.0621 (12) | 0.0162 (8) | 0.0204 (9) | 0.0038 (9) |
C6 | 0.0612 (11) | 0.0380 (9) | 0.0586 (12) | 0.0112 (8) | 0.0347 (9) | 0.0022 (8) |
C7 | 0.0591 (11) | 0.0492 (10) | 0.0407 (10) | 0.0068 (9) | 0.0194 (8) | −0.0024 (8) |
C8 | 0.0445 (9) | 0.0506 (10) | 0.0427 (10) | 0.0121 (8) | 0.0140 (8) | 0.0005 (8) |
C9 | 0.0411 (9) | 0.0433 (9) | 0.0311 (8) | 0.0100 (7) | 0.0090 (7) | 0.0033 (7) |
C10 | 0.0390 (9) | 0.0609 (11) | 0.0372 (9) | 0.0126 (8) | 0.0050 (7) | −0.0026 (8) |
C11 | 0.0473 (10) | 0.0578 (11) | 0.0335 (9) | 0.0088 (8) | 0.0037 (7) | −0.0076 (8) |
C12 | 0.0495 (10) | 0.0474 (9) | 0.0328 (9) | 0.0109 (8) | 0.0150 (7) | 0.0005 (7) |
C13 | 0.0377 (9) | 0.0621 (11) | 0.0376 (9) | 0.0098 (8) | 0.0114 (7) | 0.0005 (8) |
C14 | 0.0414 (9) | 0.0551 (10) | 0.0304 (9) | 0.0051 (8) | 0.0079 (7) | −0.0033 (7) |
Cl1—C6 | 1.7442 (17) | C5—C6 | 1.376 (3) |
N1—C1 | 1.338 (2) | C5—H5 | 0.9300 |
N1—C3 | 1.412 (2) | C6—C7 | 1.374 (3) |
N1—H1 | 0.871 (9) | C7—C8 | 1.382 (2) |
N2—C2 | 1.365 (2) | C7—H7 | 0.9300 |
N2—C1 | 1.404 (2) | C8—H8 | 0.9300 |
N2—H2 | 0.861 (9) | C9—C14 | 1.388 (2) |
N3—O4 | 1.210 (2) | C9—C10 | 1.391 (2) |
N3—O3 | 1.212 (2) | C10—C11 | 1.374 (2) |
N3—C12 | 1.477 (2) | C10—H10 | 0.9300 |
O1—C1 | 1.2207 (19) | C11—C12 | 1.375 (2) |
O2—C2 | 1.2204 (19) | C11—H11 | 0.9300 |
C2—C9 | 1.498 (2) | C12—C13 | 1.374 (2) |
C3—C4 | 1.387 (2) | C13—C14 | 1.376 (2) |
C3—C8 | 1.389 (2) | C13—H13 | 0.9300 |
C4—C5 | 1.374 (2) | C14—H14 | 0.9300 |
C4—H4 | 0.9300 | ||
C1—N1—C3 | 127.58 (14) | C5—C6—Cl1 | 119.86 (14) |
C1—N1—H1 | 115.7 (12) | C6—C7—C8 | 120.21 (17) |
C3—N1—H1 | 116.5 (12) | C6—C7—H7 | 119.9 |
C2—N2—C1 | 128.49 (13) | C8—C7—H7 | 119.9 |
C2—N2—H2 | 117.3 (12) | C7—C8—C3 | 119.68 (16) |
C1—N2—H2 | 113.7 (12) | C7—C8—H8 | 120.2 |
O4—N3—O3 | 123.72 (17) | C3—C8—H8 | 120.2 |
O4—N3—C12 | 118.26 (17) | C14—C9—C10 | 119.38 (15) |
O3—N3—C12 | 118.01 (16) | C14—C9—C2 | 122.93 (15) |
O1—C1—N1 | 125.27 (15) | C10—C9—C2 | 117.68 (15) |
O1—C1—N2 | 118.64 (14) | C11—C10—C9 | 120.85 (16) |
N1—C1—N2 | 116.09 (14) | C11—C10—H10 | 119.6 |
O2—C2—N2 | 123.12 (15) | C9—C10—H10 | 119.6 |
O2—C2—C9 | 120.95 (15) | C10—C11—C12 | 118.09 (16) |
N2—C2—C9 | 115.93 (14) | C10—C11—H11 | 121.0 |
C4—C3—C8 | 119.24 (15) | C12—C11—H11 | 121.0 |
C4—C3—N1 | 116.38 (15) | C13—C12—C11 | 122.74 (15) |
C8—C3—N1 | 124.37 (15) | C13—C12—N3 | 118.50 (15) |
C5—C4—C3 | 120.81 (17) | C11—C12—N3 | 118.74 (15) |
C5—C4—H4 | 119.6 | C12—C13—C14 | 118.57 (15) |
C3—C4—H4 | 119.6 | C12—C13—H13 | 120.7 |
C4—C5—C6 | 119.46 (16) | C14—C13—H13 | 120.7 |
C4—C5—H5 | 120.3 | C13—C14—C9 | 120.35 (15) |
C6—C5—H5 | 120.3 | C13—C14—H14 | 119.8 |
C7—C6—C5 | 120.58 (16) | C9—C14—H14 | 119.8 |
C7—C6—Cl1 | 119.56 (15) | ||
C3—N1—C1—O1 | 1.1 (3) | O2—C2—C9—C14 | −154.16 (17) |
C3—N1—C1—N2 | −179.51 (15) | N2—C2—C9—C14 | 26.5 (2) |
C2—N2—C1—O1 | −173.13 (16) | O2—C2—C9—C10 | 24.6 (3) |
C2—N2—C1—N1 | 7.4 (3) | N2—C2—C9—C10 | −154.76 (15) |
C1—N2—C2—O2 | −1.4 (3) | C14—C9—C10—C11 | −1.5 (3) |
C1—N2—C2—C9 | 178.00 (15) | C2—C9—C10—C11 | 179.64 (16) |
C1—N1—C3—C4 | 174.64 (16) | C9—C10—C11—C12 | 0.8 (3) |
C1—N1—C3—C8 | −6.5 (3) | C10—C11—C12—C13 | 0.3 (3) |
C8—C3—C4—C5 | 1.3 (3) | C10—C11—C12—N3 | 179.05 (16) |
N1—C3—C4—C5 | −179.81 (15) | O4—N3—C12—C13 | 164.33 (18) |
C3—C4—C5—C6 | −0.6 (3) | O3—N3—C12—C13 | −14.5 (3) |
C4—C5—C6—C7 | −0.4 (3) | O4—N3—C12—C11 | −14.5 (3) |
C4—C5—C6—Cl1 | 180.00 (13) | O3—N3—C12—C11 | 166.71 (19) |
C5—C6—C7—C8 | 0.8 (3) | C11—C12—C13—C14 | −0.5 (3) |
Cl1—C6—C7—C8 | −179.65 (14) | N3—C12—C13—C14 | −179.30 (16) |
C6—C7—C8—C3 | −0.1 (3) | C12—C13—C14—C9 | −0.3 (3) |
C4—C3—C8—C7 | −0.9 (3) | C10—C9—C14—C13 | 1.3 (3) |
N1—C3—C8—C7 | −179.74 (16) | C2—C9—C14—C13 | −179.96 (16) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O2 | 0.87 (1) | 1.96 (1) | 2.6699 (18) | 138 (2) |
C8—H8···O1 | 0.93 | 2.28 | 2.868 (2) | 121 |
N2—H2···O1i | 0.86 (1) | 2.02 (1) | 2.8763 (17) | 172 (2) |
C10—H10···O3ii | 0.93 | 2.58 | 3.390 (2) | 146 |
C14—H14···O1i | 0.93 | 2.47 | 3.089 (2) | 124 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x+1, y, z. |
Experimental details
Crystal data | |
Chemical formula | C14H10ClN3O4 |
Mr | 319.70 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 7.1737 (10), 8.2486 (12), 12.1873 (17) |
α, β, γ (°) | 91.418 (2), 106.157 (2), 99.400 (2) |
V (Å3) | 681.50 (17) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.30 |
Crystal size (mm) | 0.26 × 0.24 × 0.18 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.911, 0.947 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3693, 2368, 1941 |
Rint | 0.009 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.033, 0.088, 1.06 |
No. of reflections | 2368 |
No. of parameters | 207 |
No. of restraints | 2 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.26, −0.21 |
Computer programs: SMART (Bruker, 2000), SAINT (Bruker, 2000), SAINT, SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), SHELXTL (Bruker, 2000), SHELXTL.
N1—C1 | 1.338 (2) | O1—C1 | 1.2207 (19) |
N1—C3 | 1.412 (2) | O2—C2 | 1.2204 (19) |
N2—C2 | 1.365 (2) | C2—C9 | 1.498 (2) |
N2—C1 | 1.404 (2) | ||
C1—N1—C3 | 127.58 (14) | N1—C1—N2 | 116.09 (14) |
C2—N2—C1 | 128.49 (13) | N2—C2—C9 | 115.93 (14) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O2 | 0.871 (9) | 1.959 (14) | 2.6699 (18) | 137.9 (16) |
C8—H8···O1 | 0.93 | 2.275 | 2.868 (2) | 121 |
N2—H2···O1i | 0.861 (9) | 2.021 (10) | 2.8763 (17) | 172.0 (17) |
C10—H10···O3ii | 0.93 | 2.579 | 3.390 (2) | 146 |
C14—H14···O1i | 0.93 | 2.466 | 3.089 (2) | 124 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x+1, y, z. |
Thiourea derivatives have been studied intensively in recent years (Koch, 2001; Foss et al., 2004; Bombicz et al., 2004). Acyl thiourea derivatives are known to form various coordination compounds with transition metals. They can act as reducing agents to reduce the oxidation state of transition metal ions. They may also produce unexpected compounds in ordinary coordination reactions. Recently, (Zhang et al. (2003) reported that an oxazoline ring was formed in the coordination reaction of dihydrate cupric chloride with N-benzoyl-N'-(2-hydroxyethyl)thiourea. In this reaction, desulfurization and cyclization have occurred, and two oxazoline rings were formed in the resulting coordination compound. In the coordination reaction of N-ethoxycarbonyl-N'-o-chlorophenylthiourea with dihydrate cupric chloride in ethanol solution (Su, Xian et al., 2005), an unusual compound was obtained, containing the Cu6 cluster unit, where the copper(I) ions form a hexagonal ring structure via Cu—Cu bonds.
The title compound, (I) (Fig. 1), was obtained by the reaction of N-p-nitrobenzoyl-N'-p-chlorophenylthiourea with dihydrate cupric chloride, in which the S atom on the thiocarbonyl group of the thiourea ligand was replaced by an O atom. The bond lengths and angles in (I) (Table 1) are normal (Allen et al., 1987). The intramolecular N1—H1···O2 hydrogen bond (Table 2) defines a molecular conformation. The intermolecular N—H···O hydrogen bonds (Table 2) link the molecules into centrosymmetric dimers. The crystal packing (Fig. 2) is further stabilized by weak C—H···O interactions (Table 2).
The title compound was obtained unexpectedly in the coordination reaction of thiourea with copper(II). To validate the results of the structural analysis, IR and 1H NMR measurements have been carried out. The IR and 1H NMR data indicated that the thiocarbonyl group was replaced by the carbonyl group, viz. that the S atom was replaced by the O atom in air when the solution was heated. We suppose that in this process the copper(II) ion acts as an electron transferring unit, allowing the replacement of the S atom by an O atom in air. This reaction is distinct from other coordination reactions, which commonly form the 1:2 thiourea coordination compounds in triangle central structure (Su et al., 2004), and the reasons for this distinction are still unknown.